Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.5e-71 270.4 136 100.0
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 9.6e-58 226.9 136 80.9
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.1e-56 223.4 140 70.7
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 5.2e-56 221.1 112 83.9
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.2e-55 219.9 136 71.3
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.0e-55 219.2 110 81.8
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.4e-55 218.4 136 70.6
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 7.6e-55 217.2 136 70.6
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.7e-54 216.1 136 71.3
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 2.9e-54 215.3 110 80.9
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 6.4e-54 214.2 110 79.1
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.1e-53 213.4 140 77.9
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 1.4e-53 213.0 110 80.0
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 1.9e-53 212.6 139 73.4
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 2.4e-53 212.2 136 66.9
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 3.2e-53 211.8 108 78.7
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 3.2e-53 211.8 108 78.7
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 3.2e-53 211.8 108 78.7
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 3.2e-53 211.8 108 78.7
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 3.2e-53 211.8 108 78.7
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 5.4e-53 211.1 137 75.9
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 5.4e-53 211.1 137 69.3
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 7.1e-53 210.7 110 77.3
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 9.3e-53 210.3 139 72.7
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 9.3e-53 210.3 136 66.9
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 9.3e-53 210.3 110 79.1
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 9.3e-53 210.3 136 68.4
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 1.6e-52 209.5 110 77.3
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.6e-52 209.5 132 68.9
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.6e-52 209.5 136 67.6
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.7e-52 208.8 136 70.6
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 2.7e-52 208.8 108 80.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.5e-52 208.4 144 66.0
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 4.6e-52 208.0 144 65.3
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 6.0e-52 207.6 110 77.3
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 6.0e-52 207.6 110 75.5
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 7.8e-52 207.2 110 77.3
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 2.3e-51 205.7 110 75.5
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 3.0e-51 205.3 106 77.4
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 3.0e-51 205.3 106 77.4
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 3.0e-51 205.3 110 74.5
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.0e-51 205.3 110 75.5
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 3.0e-51 205.3 110 75.5
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.9e-51 204.9 108 75.9
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 3.9e-51 204.9 108 75.9
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 8.7e-51 203.8 110 74.5
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.7e-51 203.8 110 74.5
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 8.7e-51 203.8 110 74.5
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 8.7e-51 203.8 110 75.5
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 1.1e-50 203.4 104 77.9
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 1.1e-50 203.4 104 77.9
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 1.5e-50 203.0 110 74.5
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.9e-50 202.6 136 61.8
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.5e-50 202.2 104 77.9
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 3.3e-50 201.8 104 76.9
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 3.3e-50 201.8 110 75.5
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 3.3e-50 201.8 139 69.8
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 4.3e-50 201.4 105 76.2
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.3e-50 201.4 110 74.5
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 9.6e-50 200.3 152 67.8
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.1e-49 199.1 103 80.6
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.1e-49 199.1 148 61.5
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 2.1e-49 199.1 110 72.7
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 3.6e-49 198.4 140 65.7
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 6.2e-49 197.6 140 64.3
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 6.2e-49 197.6 140 64.3
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 6.2e-49 197.6 140 64.3
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 8.1e-49 197.2 102 78.4
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 1.1e-48 196.8 140 67.1
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 1.4e-48 196.4 110 70.9
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 2.4e-48 195.7 132 63.6
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 2.4e-48 195.7 110 70.9
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 4.0e-48 194.9 106 71.7
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 9.0e-48 193.7 136 64.0
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.2e-47 193.4 109 73.4
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.2e-47 193.4 109 70.6
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 2.0e-47 192.6 109 70.6
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 3.4e-47 191.8 106 77.4
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 5.8e-47 191.0 109 69.7
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 7.6e-47 190.7 107 71.0
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 9.9e-47 190.3 136 58.8
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 6.4e-46 187.6 107 69.2
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 1.1e-45 186.8 108 68.5
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 5.4e-45 184.5 125 64.8
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 7.1e-45 184.1 173 51.4
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 4.6e-44 181.4 151 55.0
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.0e-43 180.3 140 55.0
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.3e-43 179.9 104 69.2
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 3.0e-43 178.7 150 54.0
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.1e-43 177.9 110 68.2
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 8.7e-43 177.2 91 79.1
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.1e-42 176.8 131 60.3
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.5e-42 176.4 109 65.1
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 3.3e-42 175.3 111 64.9
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 5.3e-40 167.9 115 65.2
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 6.9e-40 167.5 110 68.2
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 1.5e-39 166.4 110 65.5
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.0e-39 166.0 110 65.5
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 5.8e-39 164.5 109 56.0
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.9e-37 159.5 78 84.6
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.9e-37 159.5 91 74.7
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 1.6e-36 156.4 123 57.7
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 3.9e-35 151.8 110 62.7
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 3.9e-35 151.8 84 77.4
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 8.7e-35 150.6 78 76.9
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 2.8e-33 145.6 117 57.3
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 4.0e-32 141.7 90 70.0
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.9e-29 132.9 98 63.3
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 5.5e-29 131.3 99 61.6
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.3e-26 122.1 66 75.8
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.3e-26 122.1 66 75.8
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 2.2e-25 119.4 98 59.2
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.1e-24 117.1 68 76.5
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 6.9e-24 114.4 66 69.7
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.5e-23 113.2 66 69.7
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 1.0e-22 110.5 93 47.3
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 6.5e-22 107.8 66 71.2
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.0e-19 99.0 59 67.8
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 3.9e-19 98.6 66 63.6
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 2.7e-12 75.9 43 74.4
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.8e-08 63.2 32 78.1
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 2.6e-07 59.3 62 48.4
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 1.0e-06 57.4 32 71.9
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.7e-06 56.6 29 69.0
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 5.0e-06 55.1 31 67.7


User provided reference genes

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