Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G044900 Carya illinoinensis HOM05D001562 ORTHO05D001437 1.1e-102 377.1 270 100.0
Haze_20368 Corylus avellana HOM05D001562 ORTHO05D001437 2.6e-75 286.2 270 78.9
Cfa019883 Carpinus fangiana HOM05D001562 ORTHO05D001437 5.5e-73 278.5 270 76.3
CiPaw.09G053200 Carya illinoinensis HOM05D001562 ORTHO05D001437 3.1e-68 262.7 270 75.6
QL07p016005 Quercus lobata HOM05D001562 ORTHO05D001437 2.0e-62 243.4 269 66.9
Duzib177G1059 Durio zibethinus HOM05D001562 ORTHO05D001437 2.7e-56 223.0 277 65.3
Thecc.05G236800 Theobroma cacao HOM05D001562 ORTHO05D001437 2.0e-54 216.9 268 68.7
Atru.chr2.1611 Acer truncatum HOM05D001562 ORTHO05D001437 3.7e-53 212.6 270 67.0
Duzib128G1788 Durio zibethinus HOM05D001562 ORTHO05D001437 1.8e-52 210.3 271 66.8
Prupe.7G025900 Prunus persica HOM05D001562 ORTHO05D001437 1.8e-52 210.3 277 66.1
Ciclev10031118m.g Citrus clementina HOM05D001562 ORTHO05D001437 3.1e-52 209.5 267 64.0
TWI34G0920 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 2.7e-51 206.5 271 64.6
COL.COLO4_33469 Corchorus olitorius HOM05D001562 ORTHO05D001437 9.4e-49 198.0 271 66.1
Gohir.D11G238400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 6.8e-47 191.8 289 60.2
Gorai.007G252400 Gossypium raimondii HOM05D001562 ORTHO05D001437 4.4e-46 189.1 291 59.5
Duzib106G1733 Durio zibethinus HOM05D001562 ORTHO05D001437 9.8e-46 188.0 271 59.8
Lalb_Chr21g0317331 Lupinus albus HOM05D001562 ORTHO05D001437 6.3e-45 185.3 273 54.6
TWI32G0837 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 1.1e-44 184.5 270 61.5
Lalb_Chr06g0174171 Lupinus albus HOM05D001562 ORTHO05D001437 1.4e-44 184.1 273 54.9
Eucgr.A02162 Eucalyptus grandis HOM05D001562 ORTHO05D001437 1.3e-42 177.6 263 59.7
MD12G1014900 Malus domestica HOM05D001562 ORTHO05D001437 5.6e-41 172.2 273 58.6
Manes.09G134600 Manihot esculenta HOM05D001562 ORTHO05D001437 5.6e-41 172.2 269 61.3
Ca_04454_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 9.5e-41 171.4 274 58.8
TAR633G0613 Trochodendron aralioides HOM05D001562 ORTHO05D001437 9.5e-41 171.4 274 60.6
Medtr6g027180 Medicago truncatula HOM05D001562 ORTHO05D001437 1.2e-40 171.0 272 59.9
CsaV3_3G039620 Cucumis sativus L. HOM05D001562 ORTHO05D001437 6.1e-40 168.7 267 59.6
ClCG10G016720 Citrullus lanatus HOM05D001562 ORTHO05D001437 2.3e-39 166.8 271 57.2
Dinv14556 Davidia involucrata HOM05D001562 ORTHO05D001437 4.0e-39 166.0 254 56.7
Glyma.05G087600 Glycine max HOM05D001562 ORTHO05D001437 6.8e-39 165.2 272 55.5
MELO3C009704.2 Cucumis melo HOM05D001562 ORTHO05D001437 8.9e-39 164.9 267 61.0
MD14G1012500 Malus domestica HOM05D001562 ORTHO05D001437 9.8e-38 161.4 272 55.9
VMungo1383G0082 Vigna mungo HOM05D001562 ORTHO05D001437 1.3e-37 161.0 198 53.5
RcHm_v2.0_Chr3g0495551 Rosa chinensis HOM05D001562 ORTHO05D001437 2.2e-37 160.2 272 54.4
Sed0010319 Sechium edule HOM05D001562 ORTHO05D001437 6.4e-37 158.7 266 60.2
Glyma.03G004900 Glycine max HOM05D001562 ORTHO05D001437 2.4e-36 156.8 266 50.0
Psat1g088240 Pisum sativum HOM05D001562 ORTHO05D001437 2.4e-36 156.8 272 57.7
arahy.Tifrunner.gnm1.ann1.F8BNUE Arachis hypogaea HOM05D001562 ORTHO05D001437 3.2e-36 156.4 266 56.4
arahy.Tifrunner.gnm1.ann1.UT2HDF Arachis hypogaea HOM05D001562 ORTHO05D001437 3.2e-36 156.4 266 56.4
Lalb_Chr14g0365071 Lupinus albus HOM05D001562 ORTHO05D001437 3.2e-36 156.4 265 52.1
Gohir.A11G224900 Gossypium hirsutum HOM05D001562 ORTHO05D001437 9.2e-36 154.8 212 54.2
Sed0017141 Sechium edule HOM05D001562 ORTHO05D001437 2.7e-35 153.3 267 54.7
CANSAT64G1075 Cannabis sativa HOM05D001562 ORTHO05D001437 2.9e-34 149.8 271 54.2
Psat3g084560 Pisum sativum HOM05D001562 ORTHO05D001437 1.2e-32 144.4 274 48.2
DCAR_013503 Daucus carota HOM05D001562 ORTHO05D001437 2.1e-32 143.7 263 54.8
Nn2g14206 Nelumbo nucifera HOM05D001562 ORTHO05D001437 2.8e-32 143.3 271 56.1
TPR.G20663 Trifolium pratense HOM05D001562 ORTHO05D001437 6.2e-32 142.1 257 54.1
Glyma.19G121100 Glycine max HOM05D001562 ORTHO05D001437 1.0e-31 141.4 247 54.7
Phvul.001G102901 Phaseolus vulgaris HOM05D001562 ORTHO05D001437 1.8e-31 140.6 199 50.8
TPR.G33954 Trifolium pratense HOM05D001562 ORTHO05D001437 6.8e-31 138.7 274 47.1
DCAR_016950 Daucus carota HOM05D001562 ORTHO05D001437 4.9e-29 132.5 196 46.4
Hma1.2p1_0165F.1_g073360 Hydrangea macrophylla HOM05D001562 ORTHO05D001437 7.0e-28 128.6 257 58.8
Dinv37043 Davidia involucrata HOM05D001562 ORTHO05D001437 9.2e-28 128.3 156 67.9
Ca_03432_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 2.7e-27 126.7 245 54.3
PGR042G2556 Punica granatum HOM05D001562 ORTHO05D001437 2.7e-27 126.7 274 46.4
CSS0049266 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 6.0e-27 125.6 244 56.1
FvH4_1g29400 Fragaria vesca HOM05D001562 ORTHO05D001437 7.8e-27 125.2 272 54.0
FAN19G2359 Fragaria x ananassa HOM05D001562 ORTHO05D001437 7.8e-27 125.2 272 54.0
Solyc11g012740.2 Solanum lycopersicum HOM05D001562 ORTHO05D001437 1.3e-26 124.4 267 47.9
FAN28G2700 Fragaria x ananassa HOM05D001562 ORTHO05D001437 3.0e-26 123.2 269 56.1
Lj1g0001304 Lotus japonicus HOM05D001562 ORTHO05D001437 3.9e-26 122.9 265 48.7
Medtr7g087450 Medicago truncatula HOM05D001562 ORTHO05D001437 3.9e-26 122.9 261 49.8
Sopen11g007480 Solanum pennellii HOM05D001562 ORTHO05D001437 3.9e-26 122.9 267 47.6
Oeu039190.1 Olea europaea HOM05D001562 ORTHO05D001437 1.1e-25 121.3 263 51.0
Aqoxy1G00005 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 1.9e-25 120.6 289 53.6
Nitab4.5_0001296g0060 Nicotiana tabacum HOM05D001562 ORTHO05D001437 1.9e-25 120.6 267 51.3
EL10Ac5g11646 Beta vulgaris HOM05D001562 ORTHO05D001437 2.5e-25 120.2 286 47.6
AUR62037076 Chenopodium quinoa HOM05D001562 ORTHO05D001437 4.3e-25 119.4 196 46.4
FAN23G1244 Fragaria x ananassa HOM05D001562 ORTHO05D001437 1.1e-23 114.8 260 56.5
FAN26G1485 Fragaria x ananassa HOM05D001562 ORTHO05D001437 5.2e-23 112.5 267 52.4
Peaxi162Scf00827g00063 Petunia axillaris HOM05D001562 ORTHO05D001437 8.9e-23 111.7 198 51.5
RhsimUnG0023000 Rhododendron simsii HOM05D001562 ORTHO05D001437 1.5e-22 110.9 280 54.3
ECA247G2619 Erigeron canadensis HOM05D001562 ORTHO05D001437 3.4e-22 109.8 193 50.3
MSTRG.26199 Avicennia marina HOM05D001562 ORTHO05D001437 7.1e-20 102.1 274 49.3
MSTRG.6265 Avicennia marina HOM05D001562 ORTHO05D001437 9.2e-20 101.7 200 46.0
HanXRQChr10g0298571 Helianthus annuus HOM05D001562 ORTHO05D001437 6.0e-19 99.0 200 51.5
Sc01g0005840 Simmondsia chinensis HOM05D001562 ORTHO05D001437 1.3e-18 97.8 285 43.2
SalBow1G3436 Salvia bowleyana HOM05D001562 ORTHO05D001437 3.0e-18 96.7 261 50.6
AUR62036494 Chenopodium quinoa HOM05D001562 ORTHO05D001437 4.7e-16 89.4 195 37.4
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 1.4e-15 87.8 183 42.6
Cc00_g08630 Coffea canephora HOM05D001562 ORTHO05D001437 6.8e-15 85.5 221 43.4
Oeu036469.1 Olea europaea HOM05D001562 ORTHO05D001437 2.6e-14 83.6 271 48.3
Lsat_1_v5_gn_9_32321 Lactuca sativa HOM05D002043 ORTHO05D002207 7.6e-14 82.0 197 48.2
Ah.12g062100 Amaranthus hybridus HOM05D001562 ORTHO05D001437 8.4e-13 78.6 285 44.9
PSO339G4702 Papaver somniferum HOM05D001562 ORTHO05D001437 6.0e-11 72.4 266 51.5
Migut.K00188 Erythranthe guttata HOM05D001562 ORTHO05D001437 1.9e-09 67.4 202 33.2
PSO384G0282 Papaver somniferum HOM05D001562 ORTHO05D001437 5.6e-09 65.9 266 49.6
HPP92_007505 Vanilla planifolia HOM05D001562 ORTHO05D001437 1.6e-08 64.3 205 37.1
Hund15148 Selenicereus undatus HOM05D001562 ORTHO05D001437 1.4e-07 61.2 269 39.8


User provided reference genes

Program Settings