Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.3e-224 782.7 385 100.0
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 4.1e-154 548.5 362 74.9
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.2e-153 547.0 354 77.1
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 4.8e-147 525.0 362 74.0
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 1.8e-146 523.1 389 67.6
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 4.7e-142 508.4 361 69.5
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 2.0e-140 503.1 352 69.9
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 5.9e-137 491.5 339 70.2
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 5.0e-136 488.4 356 68.5
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 4.7e-134 481.9 388 61.9
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.0e-133 478.8 354 64.7
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.0e-133 478.8 364 62.9
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.5e-132 476.9 352 65.1
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 2.0e-132 476.5 352 65.1
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.4e-130 470.3 381 60.9
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.8e-130 469.9 388 59.5
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 5.9e-129 464.9 355 63.1
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.0e-128 464.2 390 60.5
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 6.5e-128 461.5 369 61.5
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 6.5e-128 461.5 357 64.7
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 4.2e-127 458.8 339 66.1
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 5.5e-127 458.4 347 64.3
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 6.1e-126 454.9 304 70.7
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 8.0e-126 454.5 349 65.0
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 8.8e-125 451.1 387 56.3
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 3.4e-124 449.1 358 60.3
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 1.7e-123 446.8 361 59.8
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 8.3e-123 444.5 388 57.2
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 8.3e-123 444.5 388 57.2
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.1e-122 444.1 387 56.8
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.4e-122 443.7 373 58.7
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.4e-122 443.0 329 65.0
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 4.1e-122 442.2 351 63.8
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 4.1e-122 442.2 390 56.9
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 5.4e-122 441.8 337 63.5
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 7.0e-122 441.4 340 61.8
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 7.0e-122 441.4 389 57.1
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 7.0e-122 441.4 362 59.7
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.2e-121 440.7 352 61.9
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 2.7e-121 439.5 355 60.0
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 2.7e-121 439.5 389 55.8
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 7.7e-121 438.0 335 60.6
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.0e-120 437.6 364 59.6
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 3.8e-120 435.6 352 62.2
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 6.5e-120 434.9 351 59.5
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 1.5e-119 433.7 390 55.9
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.5e-119 433.0 309 66.0
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 2.5e-119 433.0 346 60.4
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 3.2e-119 432.6 349 60.7
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 9.5e-119 431.0 389 54.8
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.6e-118 430.3 390 55.9
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 2.8e-118 429.5 344 61.6
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 3.6e-118 429.1 335 60.9
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 8.0e-118 427.9 390 55.9
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.4e-117 427.2 344 61.0
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.8e-117 426.8 389 55.3
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.8e-117 426.8 392 57.1
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 5.2e-117 425.2 359 59.1
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.5e-116 423.7 314 66.6
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.3e-115 420.6 348 59.2
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 8.3e-115 417.9 352 59.1
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 1.1e-114 417.5 352 59.1
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 1.4e-114 417.2 365 58.9
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 4.1e-114 415.6 310 64.5
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 7.0e-114 414.8 390 54.1
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 9.2e-114 414.5 362 59.4
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 3.5e-113 412.5 373 54.2
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 7.8e-113 411.4 345 58.0
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 2.3e-112 409.8 373 53.9
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 7.3e-111 404.8 355 56.9
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 4.7e-110 402.1 366 53.6
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 8.0e-110 401.4 348 60.3
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.0e-109 401.0 334 57.5
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 3.0e-109 399.4 366 55.5
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.2e-108 397.5 339 60.2
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 9.8e-108 394.4 355 55.5
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.9e-107 392.1 354 55.4
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.4e-106 390.6 391 51.9
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.8e-106 390.2 363 57.0
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 3.2e-106 389.4 305 60.3
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 3.2e-106 389.4 358 53.9
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.6e-105 387.1 378 55.6
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.6e-105 387.1 355 54.4
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 1.7e-104 383.6 349 53.9
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 3.9e-104 382.5 348 54.6
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 5.0e-104 382.1 372 51.3
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 5.0e-104 382.1 352 56.0
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 6.6e-104 381.7 351 54.4
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.5e-103 379.8 338 55.9
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 5.6e-103 378.6 375 54.9
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.6e-102 377.1 326 57.1
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 2.1e-102 376.7 326 56.7
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 2.8e-102 376.3 326 56.7
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 2.8e-102 376.3 326 57.1
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 3.6e-102 375.9 248 71.8
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 6.2e-102 375.2 351 57.3
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.1e-101 374.4 354 52.5
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 2.3e-101 373.2 341 55.4
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.3e-101 373.2 323 54.5
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 3.1e-101 372.9 342 53.5
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 6.8e-101 371.7 356 53.1
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.0e-100 370.2 305 57.7
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 5.8e-100 368.6 364 54.4
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 5.8e-100 368.6 355 52.7
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 9.8e-100 367.9 349 54.4
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 8.3e-99 364.8 355 52.4
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 2.4e-98 363.2 365 53.2
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 4.6e-97 359.0 334 54.2
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 7.8e-97 358.2 355 51.0
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 6.6e-96 355.1 438 44.7
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 1.9e-95 353.6 356 52.8
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 1.9e-95 353.6 340 53.8
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 4.3e-95 352.4 271 62.7
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 7.3e-95 351.7 387 49.1
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.5e-95 351.3 293 57.7
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 1.8e-93 347.1 385 49.9
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 3.1e-93 346.3 340 52.9
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 8.9e-93 344.7 380 49.2
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.6e-92 343.2 344 52.3
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 4.4e-92 342.4 384 49.7
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 5.8e-92 342.0 390 47.9
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.7e-91 340.5 381 47.0
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.9e-91 339.7 384 47.7
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 3.7e-91 339.3 340 51.2
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 6.4e-91 338.6 283 58.7
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.1e-90 337.8 381 46.7
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.6e-89 334.0 381 46.2
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 7.8e-89 331.6 288 53.1
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 3.3e-87 326.2 241 63.5
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.5e-84 317.4 353 47.0
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.9e-83 313.2 353 46.5
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 3.8e-83 312.8 277 54.5
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 4.9e-83 312.4 355 47.0
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.2e-81 307.8 352 46.3
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.2e-81 307.8 352 46.3
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.2e-81 307.8 273 57.1
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 4.6e-81 305.8 342 46.5
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.2e-78 297.7 312 47.1
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.6e-76 288.5 288 51.7
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 3.0e-72 276.6 328 43.0
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.9e-72 276.2 321 45.2
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 8.4e-67 258.5 273 50.9
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 6.0e-65 252.3 341 41.1
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 2.5e-63 246.9 326 40.5
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.6e-62 244.2 292 44.9
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 9.0e-61 238.4 215 55.3
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.0e-60 237.3 340 39.7
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.4e-59 232.3 315 40.6
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.2e-58 229.9 315 40.6
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 1.3e-56 224.6 366 35.0
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 4.3e-55 219.5 323 35.0
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 8.2e-54 215.3 311 38.3
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.5e-52 211.1 327 38.5
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.9e-50 204.1 269 37.9
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 1.9e-50 204.1 283 36.7
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.5e-49 199.9 319 35.1
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.5e-49 199.9 319 35.1
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.9e-48 196.4 135 69.6
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 8.7e-48 195.3 191 47.6
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.5e-47 193.7 213 45.1
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.1e-42 178.3 133 62.4
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.2e-42 176.4 118 72.0
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 8.2e-38 162.2 146 52.7
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 3.4e-36 156.8 129 60.5
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.1e-34 151.8 109 65.1
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.6e-31 140.6 162 46.3
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.7e-30 137.9 80 75.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 1.7e-27 127.9 89 66.3
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 8.5e-27 125.6 258 31.4
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.5e-26 122.9 161 42.2
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 3.0e-16 90.5 60 68.3
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 5.2e-16 89.7 238 25.6
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 2.6e-15 87.4 74 59.5
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.8e-13 81.3 90 45.6
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 8.5e-11 72.4 116 37.1


User provided reference genes

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