Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G022100 Carya illinoinensis HOM05D000307 ORTHO05D000166 1.4e-130 469.9 298 100.0
Haze_20144 Corylus avellana HOM05D000307 ORTHO05D000166 6.3e-54 215.3 303 46.2
Haze_20142 Corylus avellana HOM05D000307 ORTHO05D000166 2.9e-51 206.5 306 44.4
Cfa020055 Carpinus fangiana HOM05D000307 ORTHO05D000166 6.1e-49 198.7 306 42.8
QL07p027349 Quercus lobata HOM05D000307 ORTHO05D000166 1.3e-38 164.5 182 51.1
Duzib106G1547 Durio zibethinus HOM05D000307 ORTHO05D000166 1.4e-29 134.4 158 48.1
Thecc.05G106900 Theobroma cacao HOM05D000307 ORTHO05D000166 5.0e-27 125.9 311 34.7
Duzib128G0455 Durio zibethinus HOM05D000307 ORTHO05D000166 1.9e-26 124.0 172 44.2
Ciclev10013876m.g Citrus clementina HOM05D000307 ORTHO05D000166 2.5e-26 123.6 171 43.3
Duzib128G0642 Durio zibethinus HOM05D000307 ORTHO05D000166 1.4e-24 117.9 172 44.8
Thecc.05G107100 Theobroma cacao HOM05D000307 ORTHO05D000166 2.0e-23 114.0 320 32.8
Manes.08G035100 Manihot esculenta HOM05D000307 ORTHO05D000166 2.2e-22 110.5 301 31.2
Thecc.05G106800 Theobroma cacao HOM05D000307 ORTHO05D000166 3.2e-21 106.7 185 36.8
COL.COLO4_29535 Corchorus olitorius HOM05D000307 ORTHO05D000166 5.4e-21 105.9 153 38.6
Manes.09G043800 Manihot esculenta HOM05D000307 ORTHO05D000166 1.6e-20 104.4 317 30.6
SHI28290 Sapria himalayana HOM05D000307 ORTHO05D000166 1.6e-20 104.4 152 38.8
Sed0013720 Sechium edule HOM05D000307 ORTHO05D000166 3.1e-16 90.1 162 37.0
Atru.chr1.1376 Acer truncatum HOM05D000307 ORTHO05D000166 5.2e-16 89.4 187 35.8
Potri.016G068132 Populus trichocarpa HOM05D000307 ORTHO05D000166 1.2e-15 88.2 144 38.9
Gorai.007G363700 Gossypium raimondii HOM05D000307 ORTHO05D000166 4.4e-15 86.3 272 33.5
Gohir.A11G315633 Gossypium hirsutum HOM05D000307 ORTHO05D000166 7.5e-15 85.5 272 33.5
ClCG10G018200 Citrullus lanatus HOM05D000307 ORTHO05D000166 2.9e-14 83.6 141 39.7
Gohir.D11G332700 Gossypium hirsutum HOM05D000307 ORTHO05D000166 3.7e-14 83.2 272 33.1
COL.COLO4_29537 Corchorus olitorius HOM05D000307 ORTHO05D000166 8.3e-14 82.0 179 36.9
CsaV3_3G038110 Cucumis sativus L. HOM05D000307 ORTHO05D000166 2.4e-13 80.5 136 39.0
MELO3C009552.2 Cucumis melo HOM05D000307 ORTHO05D000166 4.1e-13 79.7 136 39.0
COL.COLO4_29536 Corchorus olitorius HOM05D000307 ORTHO05D000166 5.4e-13 79.3 154 38.3
Sabra06G0155200 Salix brachista HOM05D000307 ORTHO05D000166 2.7e-12 77.0 180 32.8
MD13G1281000 Malus domestica HOM05D000307 ORTHO05D000166 3.5e-12 76.6 166 33.7
Cpa.g.c39804 Carica papaya HOM05D000307 ORTHO05D000166 4.6e-12 76.3 140 36.4
Sabra16G0069200 Salix brachista HOM05D000307 ORTHO05D000166 1.0e-11 75.1 165 34.5
Atru.chr7.769 Acer truncatum HOM05D000307 ORTHO05D000166 1.3e-11 74.7 152 32.9
Atru.chr7.788 Acer truncatum HOM05D000307 ORTHO05D000166 1.3e-11 74.7 152 32.9
Gorai.006G153500 Gossypium raimondii HOM05D000307 ORTHO05D000166 1.7e-11 74.3 165 34.5
Potri.006G201700 Populus trichocarpa HOM05D000307 ORTHO05D000166 5.1e-11 72.8 174 32.2
Prupe.1G168600 Prunus persica HOM05D000307 ORTHO05D000166 3.3e-10 70.1 185 33.5
Sed0024714 Sechium edule HOM05D000307 ORTHO05D000166 9.5e-10 68.6 132 34.8
Nn4g25289 Nelumbo nucifera HOM05D000307 ORTHO05D000166 1.6e-09 67.8 131 32.8
Gohir.A09G140700 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.8e-09 67.0 164 31.7
HPP92_017095 Vanilla planifolia HOM05D000307 ORTHO05D000166 3.6e-09 66.6 128 32.0
Duzib177G1026 Durio zibethinus HOM05D000307 ORTHO05D000166 4.7e-09 66.2 150 29.3
HPP92_017105 Vanilla planifolia HOM05D000307 ORTHO05D000166 4.7e-09 66.2 128 32.0
Gohir.D10G158100 Gossypium hirsutum HOM05D000307 ORTHO05D000166 1.1e-08 65.1 172 30.2
Gorai.011G177600 Gossypium raimondii HOM05D000307 ORTHO05D000166 1.4e-08 64.7 172 30.2
Prupe.1G168900 Prunus persica HOM05D000307 ORTHO05D000166 1.4e-08 64.7 321 26.2
Dinv24977 Davidia involucrata HOM05D000954 ORTHO05D000822 2.3e-08 63.9 166 31.3
Ciclev10006519m.g Citrus clementina HOM05D000307 ORTHO05D000166 3.1e-08 63.5 152 29.6
Ciclev10013728m.g Citrus clementina HOM05D000307 ORTHO05D000166 3.1e-08 63.5 156 29.5
Gohir.A09G140500 Gossypium hirsutum HOM05D000307 ORTHO05D000166 4.0e-08 63.2 90 41.1
Gohir.A09G140801 Gossypium hirsutum HOM05D000307 ORTHO05D000166 4.0e-08 63.2 90 41.1
Aqoxy5G02851 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 6.8e-08 62.4 130 35.4
TAR636G1525 Trochodendron aralioides HOM05D000307 ORTHO05D000166 6.8e-08 62.4 128 32.8
Gohir.D09G133950 Gossypium hirsutum HOM05D000307 ORTHO05D000166 1.2e-07 61.6 138 33.3
Gohir.D09G134050 Gossypium hirsutum HOM05D000307 ORTHO05D000166 1.2e-07 61.6 138 33.3
TAR636G2648 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.2e-07 61.6 128 32.8
GSVIVG01031333001 Vitis vinifera HOM05D000307 ORTHO05D000166 1.2e-07 61.6 128 28.9
Gorai.006G153400 Gossypium raimondii HOM05D000307 ORTHO05D000166 1.5e-07 61.2 138 33.3
Glyma.11G214600 Glycine max HOM05D000307 ORTHO05D000166 2.0e-07 60.8 138 28.3
Potri.005G002400 Populus trichocarpa HOM05D000307 ORTHO05D000166 2.0e-07 60.8 165 29.7
VMungo1383G0696 Vigna mungo HOM05D000307 ORTHO05D000166 2.0e-07 60.8 147 29.3
Phvul.001G228600 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 2.6e-07 60.5 147 29.3
Prupe.6G303900 Prunus persica HOM05D000307 ORTHO05D000166 3.4e-07 60.1 145 31.0
Potri.013G018100 Populus trichocarpa HOM05D000307 ORTHO05D000166 7.6e-07 58.9 134 28.4
Sabra13G0020900 Salix brachista HOM05D000307 ORTHO05D000166 7.6e-07 58.9 129 29.5
Thecc.05G329800 Theobroma cacao HOM05D000307 ORTHO05D000166 7.6e-07 58.9 133 27.1
Thecc.10G045300 Theobroma cacao HOM05D000307 ORTHO05D000166 9.9e-07 58.5 132 28.8
Aqoxy2G02451 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 1.3e-06 58.2 72 43.1
Thecc.10G049500 Theobroma cacao HOM05D000307 ORTHO05D000166 2.2e-06 57.4 132 28.0
Duzib150G0239 Durio zibethinus HOM05D000307 ORTHO05D000166 2.9e-06 57.0 100 32.0
Nn3g21966 Nelumbo nucifera HOM05D000307 ORTHO05D000166 2.9e-06 57.0 151 27.8
Manes.08G107300 Manihot esculenta HOM05D000307 ORTHO05D000166 3.8e-06 56.6 71 39.4
Prupe.7G092900 Prunus persica HOM05D000307 ORTHO05D000166 3.8e-06 56.6 317 26.2
THA.LOC104809945 Tarenaya hassleriana HOM05D000307 ORTHO05D000166 3.8e-06 56.6 121 35.5
Ah.14g088630 Amaranthus hybridus HOM05D000307 ORTHO05D000166 4.9e-06 56.2 71 38.0
HPP92_001175 Vanilla planifolia HOM05D000307 ORTHO05D000166 4.9e-06 56.2 93 35.5
Aqoxy2G02455 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 6.4e-06 55.8 72 41.7
Glyma.18G042000 Glycine max HOM05D000307 ORTHO05D000166 6.4e-06 55.8 138 27.5
Hma1.2p1_0759F.1_g213890 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 6.4e-06 55.8 82 34.1
Nitab4.5_0001463g0130 Nicotiana tabacum HOM05D000307 ORTHO05D000166 6.4e-06 55.8 98 31.6
QL04p024253 Quercus lobata HOM05D000307 ORTHO05D000166 6.4e-06 55.8 149 25.5
EL10Ac1g00684 Beta vulgaris HOM05D000307 ORTHO05D000166 8.4e-06 55.5 74 33.8
Rhsim11G0105500 Rhododendron simsii HOM05D000307 ORTHO05D000166 8.4e-06 55.5 138 31.9


User provided reference genes

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