Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.8e-84 315.8 157 100.0
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 9.3e-57 223.8 148 75.0
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 7.9e-56 220.7 148 74.3
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 1.8e-28 129.8 146 45.9
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 1.2e-27 127.1 144 45.8
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 5.0e-26 121.7 138 47.8
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 2.5e-25 119.4 117 55.6
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 5.5e-25 118.2 124 46.0
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 1.2e-22 110.5 138 44.9
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.5e-22 110.2 132 43.9
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 2.6e-22 109.4 114 47.4
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 4.4e-22 108.6 110 48.2
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 7.5e-22 107.8 143 40.6
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 7.5e-22 107.8 120 48.3
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 1.7e-21 106.7 152 42.1
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 1.7e-21 106.7 121 46.3
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 2.2e-21 106.3 121 45.5
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 2.2e-21 106.3 121 46.3
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 4.8e-21 105.1 121 45.5
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 4.8e-21 105.1 120 45.0
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 8.3e-21 104.4 121 45.5
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 1.1e-20 104.0 147 39.5
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 1.4e-20 103.6 141 41.1
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 1.8e-20 103.2 121 45.5
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 2.4e-20 102.8 128 43.8
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 3.1e-20 102.4 120 41.7
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 3.1e-20 102.4 134 41.0
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 4.1e-20 102.1 121 45.5
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 5.4e-20 101.7 121 47.9
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 5.4e-20 101.7 121 47.9
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 5.4e-20 101.7 120 42.5
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 7.0e-20 101.3 120 45.0
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 9.1e-20 100.9 121 43.0
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 1.2e-19 100.5 117 46.2
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 1.2e-19 100.5 121 42.1
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 1.6e-19 100.1 129 39.5
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 2.7e-19 99.4 123 41.5
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 5.9e-19 98.2 136 37.5
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 7.7e-19 97.8 121 41.3
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 1.3e-18 97.1 120 40.8
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 1.7e-18 96.7 120 41.7
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 2.3e-18 96.3 136 40.4
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 2.3e-18 96.3 128 34.4
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 2.9e-18 95.9 120 45.0
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 3.8e-18 95.5 123 42.3
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 3.8e-18 95.5 133 38.3
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 5.0e-18 95.1 117 42.7
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 8.6e-18 94.4 117 40.2
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 8.6e-18 94.4 122 38.5
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 8.6e-18 94.4 117 42.7
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 1.1e-17 94.0 112 46.4
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 1.1e-17 94.0 123 41.5
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.9e-17 93.2 110 42.7
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.9e-17 93.2 110 42.7
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 1.9e-17 93.2 136 36.8
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 2.5e-17 92.8 120 40.8
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 2.5e-17 92.8 120 35.8
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.5e-17 92.8 120 35.8
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.3e-17 92.4 120 35.8
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 3.3e-17 92.4 139 37.4
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 5.5e-17 91.7 128 46.1
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 7.2e-17 91.3 110 40.9
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 9.5e-17 90.9 118 35.6
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 1.2e-16 90.5 117 35.9
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 1.2e-16 90.5 120 39.2
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 1.6e-16 90.1 120 39.2
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 1.6e-16 90.1 128 45.3
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 1.6e-16 90.1 117 40.2
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 1.6e-16 90.1 117 40.2
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 1.6e-16 90.1 103 44.7
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 2.8e-16 89.4 117 41.0
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 2.8e-16 89.4 120 39.2
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 2.8e-16 89.4 125 40.0
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 4.7e-16 88.6 117 40.2
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 6.1e-16 88.2 117 35.0
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 1.0e-15 87.4 118 33.1
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 2.3e-15 86.3 150 34.0
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 4.0e-15 85.5 140 31.4
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 5.2e-15 85.1 124 33.9
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 2.0e-14 83.2 113 35.4
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 3.4e-14 82.4 128 39.1
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 3.4e-14 82.4 123 36.6
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 3.4e-14 82.4 123 36.6
vmacro09754 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 4.4e-14 82.0 86 46.5
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 5.7e-14 81.6 118 32.2
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 7.5e-14 81.3 120 34.2
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 8.3e-13 77.8 116 40.5
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 8.3e-13 77.8 127 30.7
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 1.8e-12 76.6 120 30.8
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 3.1e-12 75.9 105 38.1
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 5.4e-12 75.1 110 36.4
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 7.0e-12 74.7 117 38.5
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 7.0e-12 74.7 125 35.2
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 7.0e-12 74.7 125 35.2
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 7.0e-12 74.7 125 35.2
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 1.2e-11 73.9 159 30.8
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.2e-11 73.9 125 35.2
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 1.2e-11 73.9 134 36.6
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 2.0e-11 73.2 85 45.9
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 5.9e-11 71.6 128 30.5
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 5.9e-11 71.6 142 31.7
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 5.9e-11 71.6 83 45.8
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 1.3e-10 70.5 143 31.5
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 1.3e-10 70.5 84 45.2
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 1.3e-10 70.5 118 33.1
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 2.9e-10 69.3 143 33.6
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 3.8e-10 68.9 118 32.2
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 8.6e-10 67.8 137 30.7
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 8.6e-10 67.8 137 30.7
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 1.5e-09 67.0 105 37.1
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 1.9e-09 66.6 120 29.2
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 1.9e-09 66.6 120 29.2
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 2.5e-09 66.2 110 30.9
AT2G04395 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 9.5e-09 64.3 81 33.3
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 1.2e-08 63.9 89 33.7
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 4.7e-08 62.0 123 27.6
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.3e-07 59.7 146 30.1
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 6.8e-07 58.2 120 32.5
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 1.2e-06 57.4 119 28.6
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.0e-06 56.6 160 26.9
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 2.6e-06 56.2 67 44.8
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 7.5e-06 54.7 66 48.5


User provided reference genes

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