Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 0.0e+00 1186.8 608 100.0
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.5e-256 889.4 609 75.4
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 2.5e-246 855.5 671 68.4
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 5.7e-243 844.3 613 72.8
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 3.6e-213 745.3 607 64.6
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 4.5e-208 728.4 609 62.4
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 8.8e-204 714.1 596 62.9
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 8.8e-204 714.1 593 62.9
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 4.4e-203 711.8 599 62.1
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 2.4e-201 706.1 602 62.6
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 2.7e-200 702.6 615 60.5
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 2.9e-199 699.1 598 61.4
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 8.6e-199 697.6 598 61.9
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 4.2e-198 695.3 593 61.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 5.5e-198 694.9 597 61.1
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 6.1e-197 691.4 602 61.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.3e-196 689.5 593 60.2
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 6.8e-196 688.0 602 59.0
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 3.7e-194 682.2 596 59.2
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.5e-192 675.6 604 59.4
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 1.3e-191 673.7 601 58.2
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 3.6e-189 665.6 621 56.7
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.7e-189 665.2 621 56.5
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 4.7e-189 665.2 596 58.6
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 8.0e-189 664.5 596 58.1
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.0e-188 664.1 621 56.4
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 2.3e-188 662.9 598 58.0
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.7e-186 656.8 595 58.7
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 4.1e-185 652.1 593 58.5
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.9e-184 648.3 593 57.7
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 2.3e-183 646.4 605 57.4
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 5.0e-183 645.2 606 56.3
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 6.8e-180 634.8 593 56.8
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 2.0e-179 633.3 601 57.1
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 9.8e-179 630.9 582 56.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.3e-178 630.6 657 51.9
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.4e-177 626.3 606 57.4
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 2.7e-176 622.9 592 56.1
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.0e-175 620.9 658 53.2
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 1.5e-174 617.1 555 59.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.5e-174 617.1 599 53.8
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 3.3e-174 615.9 600 53.2
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 5.6e-174 615.1 597 55.8
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 5.6e-174 615.1 591 53.5
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.1e-172 610.9 621 53.0
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.8e-172 610.1 594 54.9
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 5.2e-172 608.6 595 55.6
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 2.4e-169 599.7 594 54.7
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.2e-168 597.4 597 54.8
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.5e-168 595.9 607 51.6
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 7.3e-166 588.2 609 53.5
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.4e-163 579.3 595 51.4
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.4e-161 573.2 597 50.3
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 5.4e-161 572.0 589 51.3
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.1e-156 557.8 609 49.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.8e-156 557.0 600 51.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 6.9e-156 555.1 654 47.7
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 3.4e-155 552.7 659 46.0
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 3.4e-155 552.7 606 52.1
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.4e-153 547.4 612 49.3
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 3.2e-153 546.2 582 51.4
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 4.2e-153 545.8 610 49.5
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.7e-151 540.4 594 50.5
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 5.1e-151 538.9 525 55.2
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 2.8e-149 533.1 616 48.2
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 1.3e-143 514.2 605 48.4
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 5.3e-140 502.3 603 47.6
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 2.0e-139 500.4 605 46.8
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 8.4e-138 495.0 609 45.2
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 8.4e-138 495.0 606 47.2
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 7.9e-136 488.4 506 54.2
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.5e-134 484.2 478 54.2
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 4.3e-134 482.6 644 44.7
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 6.9e-132 475.3 619 44.6
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 4.9e-130 469.2 540 48.9
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.2e-128 464.5 607 44.3
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.3e-127 461.1 607 44.5
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 1.1e-126 458.0 606 44.1
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 4.8e-125 452.6 538 48.9
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.4e-124 451.1 384 62.5
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 2.4e-124 450.3 607 43.5
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.3e-122 444.5 424 56.8
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.2e-122 443.7 383 61.9
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.9e-122 443.4 601 41.6
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.7e-120 436.8 384 61.5
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 1.1e-118 431.4 494 49.2
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 3.3e-118 429.9 412 54.1
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 4.3e-118 429.5 618 42.2
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 1.7e-117 427.6 606 41.7
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.7e-117 427.6 583 42.9
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.5e-115 421.0 650 40.2
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 5.0e-114 416.0 594 39.7
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 6.5e-114 415.6 397 56.7
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 9.4e-113 411.8 634 40.7
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.4e-110 402.1 384 57.8
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 5.9e-107 392.5 563 42.5
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 4.1e-100 369.8 344 57.6
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.3e-93 348.2 598 37.1
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 2.1e-80 304.3 448 38.4
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 2.4e-76 290.8 271 56.8
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.8e-72 277.3 458 40.2
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 6.2e-64 249.6 305 46.6
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 4.4e-46 190.3 286 38.1
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 6.4e-45 186.4 498 28.7
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 1.9e-41 174.9 176 51.7
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 8.1e-40 169.5 569 28.1
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 5.8e-38 163.3 522 27.2
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 5.8e-38 163.3 586 28.0
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 3.8e-37 160.6 302 35.4
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 4.3e-33 147.1 637 24.5
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.3e-33 147.1 91 75.8
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 6.9e-31 139.8 141 49.6
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 2.4e-28 131.3 144 48.6
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 5.5e-20 103.6 98 58.2
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 4.6e-19 100.5 134 47.0
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 5.3e-15 87.0 87 51.7
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 1.6e-11 75.5 252 25.8
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.9e-10 70.9 63 50.8
MELO3C031505.2 Cucumis melo HOM05D006351 ORTHO05D007796 8.7e-10 69.7 66 53.0
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 8.7e-10 69.7 63 52.4
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.1e-09 69.3 62 51.6
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.3e-09 67.4 68 47.1
FvH4_6g18901 Fragaria vesca HOM05D006351 ORTHO05D007796 4.8e-08 63.9 83 42.2
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 4.1e-07 60.8 51 54.9


User provided reference genes

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