Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 1.3e-79 299.7 155 100.0
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 9.0e-36 154.1 163 59.5
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 2.0e-35 152.9 163 58.9
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 7.4e-30 134.4 155 55.5
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 3.7e-21 105.5 145 44.8
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 3.1e-20 102.4 156 46.8
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 3.1e-20 102.4 87 63.2
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 8.4e-18 94.4 151 41.1
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 2.5e-17 92.8 162 42.6
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 3.2e-17 92.4 146 43.2
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 4.2e-17 92.0 152 40.1
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 5.5e-17 91.7 141 41.1
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 7.1e-17 91.3 148 42.6
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 1.2e-16 90.5 151 45.0
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.6e-16 90.1 83 57.8
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.6e-16 90.1 83 57.8
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 1.6e-16 90.1 152 39.5
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 3.0e-15 85.9 80 55.0
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 3.0e-15 85.9 164 39.0
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 3.9e-15 85.5 159 39.6
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 5.1e-15 85.1 142 41.5
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 2.5e-14 82.8 146 40.4
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 2.5e-14 82.8 138 40.6
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 4.3e-14 82.0 137 38.0
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 4.3e-14 82.0 86 50.0
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 4.3e-14 82.0 89 48.3
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 7.4e-14 81.3 135 39.3
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 7.4e-14 81.3 154 43.5
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 7.4e-14 81.3 149 39.6
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 1.6e-13 80.1 142 44.4
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 2.2e-13 79.7 149 39.6
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 2.2e-13 79.7 148 39.2
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 4.8e-13 78.6 154 42.9
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 6.3e-13 78.2 149 38.9
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 6.3e-13 78.2 158 39.9
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 8.2e-13 77.8 155 40.0
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 1.1e-12 77.4 155 38.7
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 1.4e-12 77.0 141 37.6
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.4e-12 77.0 155 40.6
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 1.8e-12 76.6 136 39.7
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.4e-12 76.3 146 39.7
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 3.1e-12 75.9 139 40.3
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 3.1e-12 75.9 123 39.8
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 3.1e-12 75.9 123 39.8
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 4.1e-12 75.5 146 36.3
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 9.0e-12 74.3 144 37.5
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 1.2e-11 73.9 146 37.0
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.5e-11 73.6 147 36.7
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 2.0e-11 73.2 60 61.7
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 2.0e-11 73.2 100 45.0
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 2.6e-11 72.8 146 37.7
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 2.6e-11 72.8 94 47.9
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 4.5e-11 72.0 95 47.4
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 4.5e-11 72.0 144 35.4
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 5.9e-11 71.6 88 44.3
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 7.7e-11 71.2 66 57.6
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 1.0e-10 70.9 98 44.9
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.7e-10 70.1 141 34.8
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 1.7e-10 70.1 83 45.8
Lalb_Chr24g0401951 Lupinus albus HOM05D008192 ORTHO05D010301 2.2e-10 69.7 123 36.6
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 3.8e-10 68.9 150 31.3
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 3.8e-10 68.9 97 44.3
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 1.9e-09 66.6 119 37.8
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.5e-09 66.2 85 47.1
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.5e-09 66.2 76 48.7
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 2.5e-09 66.2 148 38.5
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 2.5e-09 66.2 102 41.2
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 3.2e-09 65.9 103 43.7
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 4.2e-09 65.5 150 30.7
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 7.2e-09 64.7 98 44.9
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 7.2e-09 64.7 76 46.1
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 9.4e-09 64.3 91 47.3
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 1.2e-08 63.9 93 43.0
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 1.2e-08 63.9 129 38.0
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 1.2e-08 63.9 144 36.8
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.6e-08 63.5 137 37.2
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 2.7e-08 62.8 78 47.4
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 3.6e-08 62.4 136 34.6
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 4.6e-08 62.0 82 43.9
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 4.6e-08 62.0 145 35.9
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 4.6e-08 62.0 140 35.7
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 4.6e-08 62.0 135 35.6
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 6.1e-08 61.6 96 36.5
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 6.1e-08 61.6 76 42.1
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 6.1e-08 61.6 76 42.1
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 6.1e-08 61.6 132 37.9
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 7.9e-08 61.2 90 40.0
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 7.9e-08 61.2 146 37.0
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 7.9e-08 61.2 91 38.5
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 7.9e-08 61.2 71 49.3
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 1.0e-07 60.8 101 39.6
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.0e-07 60.8 93 43.0
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 1.4e-07 60.5 86 40.7
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.4e-07 60.5 93 38.7
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 1.4e-07 60.5 83 44.6
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 1.4e-07 60.5 69 46.4
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 1.4e-07 60.5 71 47.9
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.4e-07 60.5 100 38.0
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 1.8e-07 60.1 151 31.1
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.8e-07 60.1 134 31.3
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 1.8e-07 60.1 90 43.3
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 1.8e-07 60.1 136 36.8
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 1.8e-07 60.1 100 38.0
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 2.3e-07 59.7 124 35.5
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 3.0e-07 59.3 84 42.9
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 3.0e-07 59.3 80 43.8
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 3.9e-07 58.9 100 37.0
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 3.9e-07 58.9 100 37.0
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 3.9e-07 58.9 80 45.0
ATR0580G180 Amborella trichopoda HOM05D003759 ORTHO05D004149 5.1e-07 58.5 121 36.4
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 5.1e-07 58.5 89 39.3
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 5.1e-07 58.5 82 41.5
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 5.1e-07 58.5 85 42.4
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 6.7e-07 58.2 86 41.9
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 6.7e-07 58.2 93 37.6
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 6.7e-07 58.2 79 46.8
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 6.7e-07 58.2 89 42.7
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 8.8e-07 57.8 106 37.7
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 8.8e-07 57.8 119 35.3
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 8.8e-07 57.8 93 37.6
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 8.8e-07 57.8 134 34.3
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 8.8e-07 57.8 53 54.7
Hund02985 Selenicereus undatus HOM05D008192 ORTHO05D010301 8.8e-07 57.8 165 33.3
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 1.1e-06 57.4 98 42.9
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 1.1e-06 57.4 79 44.3
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 1.1e-06 57.4 100 35.0
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 1.5e-06 57.0 88 44.3
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.5e-06 57.0 107 35.5
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.5e-06 57.0 161 29.8
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 1.5e-06 57.0 93 38.7
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 2.5e-06 56.2 97 41.2
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 2.5e-06 56.2 83 44.6
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 2.5e-06 56.2 93 43.0
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 2.5e-06 56.2 101 40.6
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 3.3e-06 55.8 74 45.9
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 4.3e-06 55.5 64 48.4
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 4.3e-06 55.5 90 37.8
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 4.3e-06 55.5 83 38.6
VMungo0647G0321 Vigna mungo HOM05D008192 ORTHO05D010301 4.3e-06 55.5 130 34.6
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 5.7e-06 55.1 105 34.3
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 5.7e-06 55.1 89 43.8
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 5.7e-06 55.1 162 32.7
FvH4_1g00810 Fragaria vesca HOM05D003759 ORTHO05D004149 7.4e-06 54.7 103 35.0
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 7.4e-06 54.7 90 37.8
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 7.4e-06 54.7 101 37.6
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 7.4e-06 54.7 80 38.8
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 7.4e-06 54.7 92 39.1
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 7.4e-06 54.7 82 40.2
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 7.4e-06 54.7 86 38.4
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 9.7e-06 54.3 91 39.6
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 9.7e-06 54.3 80 42.5
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 9.7e-06 54.3 120 31.7
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 9.7e-06 54.3 64 45.3
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 9.7e-06 54.3 65 46.2
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 9.7e-06 54.3 85 44.7


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