Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 5.0e-179 630.9 309 100.0
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 4.4e-151 538.1 296 90.2
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.6e-137 493.0 297 83.5
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.2e-132 476.9 298 79.2
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 1.4e-128 463.4 303 75.9
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 3.4e-127 458.8 296 78.4
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 2.7e-124 449.1 299 74.2
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.3e-123 446.8 282 76.6
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 6.6e-123 444.5 301 74.8
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 4.3e-122 441.8 300 73.0
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.8e-121 439.1 292 72.6
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 8.1e-121 437.6 303 73.6
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.2e-119 433.7 278 74.8
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 1.5e-119 433.3 296 73.0
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 2.0e-119 433.0 277 76.5
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 8.4e-118 427.6 285 75.8
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 1.9e-117 426.4 300 72.3
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.2e-116 423.7 296 71.6
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.6e-116 423.3 296 70.9
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.1e-116 422.9 296 70.6
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 4.6e-116 421.8 273 76.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 6.0e-116 421.4 290 73.4
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 1.3e-115 420.2 296 71.3
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 2.3e-115 419.5 273 76.2
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 3.0e-115 419.1 294 73.5
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 5.1e-115 418.3 289 73.7
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.9e-114 416.4 294 72.8
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 2.5e-114 416.0 296 70.9
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 5.6e-114 414.8 289 74.0
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 5.6e-114 414.8 296 72.3
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 9.6e-114 414.1 298 71.1
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 1.3e-113 413.7 263 76.8
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 2.1e-113 412.9 269 76.6
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 3.6e-113 412.1 294 69.7
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 6.2e-113 411.4 301 69.1
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.1e-112 410.6 302 69.2
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.4e-112 410.2 259 78.4
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.4e-112 410.2 259 78.4
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.4e-112 410.2 259 78.4
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 9.0e-112 407.5 261 75.5
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 1.5e-111 406.8 289 71.3
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.3e-110 403.7 287 71.4
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 3.8e-110 402.1 300 69.0
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 8.4e-110 401.0 296 68.9
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.4e-109 400.2 298 65.4
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 9.3e-109 397.5 305 66.6
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.3e-107 393.7 266 72.6
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 1.3e-107 393.7 236 81.4
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.8e-107 393.3 283 70.7
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 5.1e-107 391.7 249 77.5
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.9e-106 389.8 257 73.5
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 3.3e-106 389.0 259 73.7
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 5.6e-106 388.3 289 67.8
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 7.4e-106 387.9 301 66.4
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 9.6e-106 387.5 245 76.7
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 1.3e-105 387.1 301 66.4
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.3e-105 387.1 301 66.4
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.3e-105 387.1 301 66.4
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 2.1e-105 386.3 294 66.0
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 2.8e-105 386.0 296 65.9
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 3.7e-105 385.6 289 68.2
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 2.4e-104 382.9 245 76.3
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 2.4e-104 382.9 245 76.3
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 4.0e-104 382.1 315 60.0
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 9.0e-104 380.9 249 75.9
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 9.0e-104 380.9 302 64.2
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 4.5e-103 378.6 259 73.4
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.0e-102 377.5 259 72.2
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 1.0e-102 377.5 292 66.4
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 1.3e-102 377.1 308 64.0
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 2.9e-102 375.9 259 71.8
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.9e-101 373.2 216 83.3
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 7.9e-100 367.9 296 63.5
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.8e-99 366.7 292 64.0
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.5e-98 363.6 364 55.5
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 4.3e-98 362.1 293 63.1
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 5.7e-98 361.7 258 68.2
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 7.4e-98 361.3 293 63.1
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.3e-97 360.5 266 69.5
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 1.8e-96 356.7 240 73.3
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.2e-95 354.0 300 61.3
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 4.5e-95 352.1 232 73.7
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 7.6e-95 351.3 263 66.2
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.0e-94 350.9 249 70.7
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 2.5e-93 346.3 243 69.5
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 7.2e-93 344.7 265 70.2
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 7.9e-92 341.3 293 62.1
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 6.7e-91 338.2 295 62.7
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 2.2e-89 333.2 264 66.7
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 3.7e-89 332.4 274 63.1
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.3e-89 331.6 265 65.3
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.1e-88 330.9 226 69.5
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.4e-88 329.7 289 61.6
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.0e-87 326.6 265 64.5
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 7.7e-87 324.7 245 68.6
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 7.7e-79 298.1 183 77.6
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 7.7e-79 298.1 158 94.9
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 3.9e-75 285.8 359 46.8
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.7e-75 285.0 298 51.3
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.5e-74 283.9 282 54.3
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.1e-72 277.7 205 69.8
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.1e-72 277.7 264 60.6
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 8.8e-67 258.1 255 52.5
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 4.7e-60 235.7 176 69.3
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.3e-45 186.4 100 85.0
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 2.8e-44 183.3 130 67.7
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.5e-37 160.2 107 72.9
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 3.1e-35 153.3 281 34.9
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.3e-25 121.3 196 35.7
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.6e-12 77.8 56 71.4
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 8.1e-12 75.5 101 43.6


User provided reference genes

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