Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 3.8e-249 864.4 438 100.0
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.5e-181 639.8 404 81.2
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 4.6e-178 628.2 451 75.2
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 3.9e-153 545.4 380 74.2
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.8e-151 539.3 380 71.3
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 2.5e-147 526.2 376 72.6
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.7e-146 522.7 371 72.8
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 3.0e-145 519.2 417 66.2
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.9e-145 518.8 371 72.0
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 1.3e-143 513.8 371 71.7
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 8.2e-143 511.1 403 68.2
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 3.1e-142 509.2 446 62.6
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 5.9e-141 505.0 436 62.4
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.3e-140 503.8 379 68.9
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 1.7e-140 503.4 353 74.2
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 1.9e-139 500.0 350 72.6
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.9e-139 500.0 431 63.8
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 4.2e-139 498.8 380 69.5
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 4.2e-139 498.8 379 68.9
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 4.2e-139 498.8 393 67.7
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 1.6e-138 496.9 433 62.1
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 2.1e-138 496.5 348 73.3
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.4e-137 493.8 348 73.6
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 3.9e-137 492.3 400 65.5
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.5e-136 490.3 439 62.6
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 2.0e-136 490.0 429 61.1
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 2.5e-136 489.6 414 64.7
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 2.5e-136 489.6 450 61.1
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 4.3e-136 488.8 455 58.5
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 5.7e-136 488.4 424 62.0
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 7.4e-136 488.0 375 66.9
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 1.7e-135 486.9 368 66.6
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.7e-135 486.9 425 62.4
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 2.8e-135 486.1 386 66.8
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 1.1e-134 484.2 425 61.9
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 1.1e-134 484.2 416 62.7
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.1e-134 484.2 404 63.9
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 3.1e-134 482.6 407 64.4
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 6.9e-134 481.5 390 66.4
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 9.1e-134 481.1 418 61.2
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 1.2e-133 480.7 438 59.6
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 2.6e-133 479.6 377 66.8
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 2.6e-133 479.6 474 56.3
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 3.4e-133 479.2 379 67.3
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 5.0e-132 475.3 376 66.2
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 6.5e-132 474.9 450 59.1
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 8.5e-132 474.6 420 61.7
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.1e-131 474.2 367 66.5
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 1.9e-131 473.4 450 58.7
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 4.2e-131 472.2 427 61.8
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 7.2e-131 471.5 379 68.3
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.6e-130 470.3 354 69.2
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.6e-130 469.2 433 59.1
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.7e-130 468.8 346 71.1
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 7.9e-130 468.0 397 64.5
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 1.0e-129 467.6 349 68.5
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.8e-129 466.8 349 68.2
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 5.1e-129 465.3 389 65.0
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 6.7e-129 464.9 379 67.0
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 6.7e-129 464.9 442 58.1
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 8.8e-129 464.5 377 65.8
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.1e-128 464.2 383 65.5
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 1.5e-128 463.8 386 65.0
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 1.5e-128 463.8 383 65.0
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 2.0e-128 463.4 328 70.1
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 2.6e-128 463.0 388 64.2
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 2.6e-128 463.0 397 64.0
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 3.3e-128 462.6 386 64.2
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 4.4e-128 462.2 339 69.6
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 5.7e-128 461.8 349 69.3
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 7.4e-128 461.5 383 64.0
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 9.7e-128 461.1 372 65.6
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.7e-127 460.3 385 64.7
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.7e-127 459.1 377 64.7
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 2.4e-126 456.4 344 68.0
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.5e-125 453.8 385 63.6
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 2.0e-125 453.4 353 66.9
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 2.0e-125 453.4 400 59.8
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.3e-124 450.7 380 63.4
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 2.9e-124 449.5 436 58.3
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 3.8e-124 449.1 310 74.8
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 8.5e-124 448.0 356 65.7
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 4.2e-123 445.7 372 62.9
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 6.1e-122 441.8 357 65.5
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.0e-121 439.5 371 61.5
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 4.4e-120 435.6 431 56.4
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 7.4e-120 434.9 390 59.5
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 6.3e-119 431.8 403 59.3
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 2.0e-117 426.8 373 59.5
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 5.0e-116 422.2 372 63.2
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.2e-115 419.5 343 62.7
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 1.2e-114 417.5 292 71.9
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 2.3e-100 370.2 240 77.9
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 8.3e-95 351.7 265 68.7
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 3.2e-94 349.7 379 52.8
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 6.6e-92 342.0 415 48.2
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 5.6e-91 339.0 345 55.7
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 3.1e-89 333.2 432 47.7
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.4e-86 324.3 369 49.1
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.5e-85 319.7 212 76.9
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 4.0e-73 279.6 201 70.6
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 5.4e-70 269.2 209 68.9
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 5.6e-67 259.2 359 44.8
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 2.1e-66 257.3 354 41.2
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 6.4e-63 245.7 352 42.9
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 2.1e-58 230.7 211 56.4
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.8e-58 230.3 367 40.1
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 3.9e-52 209.9 256 50.4
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 5.1e-36 156.4 212 45.8
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 3.7e-34 150.2 80 91.2
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 5.5e-30 136.3 252 35.3
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 1.9e-27 127.9 102 63.7
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 9.7e-27 125.6 93 65.6
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 4.6e-21 106.7 112 50.0
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 2.2e-18 97.8 165 43.6
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 6.3e-18 96.3 116 50.0
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.5e-16 91.7 141 40.4
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 6.1e-13 79.7 353 25.8
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.2e-10 71.2 355 25.6
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 3.5e-08 63.9 40 72.5


User provided reference genes

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