Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 4.2e-46 188.7 105 100.0
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 7.0e-33 144.8 104 74.0
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 1.6e-32 143.7 105 73.3
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 5.9e-32 141.7 107 73.8
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 5.9e-32 141.7 109 74.3
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 1.3e-31 140.6 105 71.4
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.7e-31 140.2 101 76.2
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 2.9e-31 139.4 107 72.9
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.8e-31 139.0 105 71.4
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 6.5e-31 138.3 106 69.8
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 8.5e-31 137.9 105 71.4
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.5e-30 137.1 102 69.6
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 1.5e-30 137.1 106 77.4
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 1.9e-30 136.7 105 76.2
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.9e-30 136.7 104 76.0
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 2.5e-30 136.3 106 71.7
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 3.2e-30 136.0 102 79.4
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 3.2e-30 136.0 102 72.5
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 9.4e-30 134.4 105 69.5
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.2e-29 134.0 108 69.4
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.2e-29 134.0 106 69.8
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 2.1e-29 133.3 98 73.5
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 2.1e-29 133.3 101 77.2
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 2.7e-29 132.9 98 74.5
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 3.6e-29 132.5 99 74.7
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 3.6e-29 132.5 103 68.0
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 4.7e-29 132.1 105 71.4
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 6.1e-29 131.7 106 67.9
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 8.0e-29 131.3 104 72.1
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 8.0e-29 131.3 100 71.0
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.0e-28 131.0 111 66.7
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.8e-28 130.2 111 73.0
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 3.0e-28 129.4 108 64.8
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 6.7e-28 128.3 108 72.2
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.1e-27 127.5 105 65.7
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 1.1e-27 127.5 105 65.7
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 1.1e-27 127.5 105 65.7
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 1.1e-27 127.5 101 66.3
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 1.5e-27 127.1 104 67.3
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.5e-27 127.1 105 72.4
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 2.6e-27 126.3 103 67.0
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 3.3e-27 125.9 102 67.6
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 3.3e-27 125.9 99 65.7
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 4.4e-27 125.6 105 64.8
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 4.4e-27 125.6 98 69.4
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 7.5e-27 124.8 108 71.3
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 9.7e-27 124.4 105 64.8
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 9.7e-27 124.4 102 74.5
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 9.7e-27 124.4 99 66.7
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 1.7e-26 123.6 102 64.7
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 1.7e-26 123.6 98 76.5
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.2e-26 123.2 102 72.5
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 4.8e-26 122.1 107 60.7
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.8e-25 120.2 68 86.8
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 4.1e-25 119.0 106 70.8
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 4.1e-25 119.0 104 65.4
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 4.1e-25 119.0 69 85.5
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 5.3e-25 118.6 101 73.3
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 1.2e-24 117.5 102 68.6
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 2.0e-24 116.7 101 63.4
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 2.7e-24 116.3 65 86.2
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 2.7e-24 116.3 65 86.2
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 2.7e-24 116.3 63 90.5
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.7e-24 116.3 91 69.2
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 2.7e-24 116.3 109 64.2
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 3.5e-24 115.9 104 70.2
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 7.7e-24 114.8 91 67.0
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 7.7e-24 114.8 97 62.9
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 2.9e-23 112.8 80 76.2
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 5.0e-23 112.1 62 87.1
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 5.0e-23 112.1 62 87.1
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 5.0e-23 112.1 104 61.5
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 5.0e-23 112.1 100 65.0
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.5e-22 110.5 63 84.1
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 1.9e-22 110.2 63 84.1
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 2.5e-22 109.8 101 65.3
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 3.2e-22 109.4 63 82.5
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 3.2e-22 109.4 104 57.7
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 3.2e-22 109.4 70 81.4
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 5.5e-22 108.6 71 77.5
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 5.5e-22 108.6 97 61.9
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 5.5e-22 108.6 92 66.3
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 9.4e-22 107.8 70 77.1
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.2e-21 107.5 91 64.8
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 1.6e-21 107.1 65 83.1
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.6e-21 107.1 101 63.4
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 2.7e-21 106.3 104 55.8
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 4.0e-20 102.4 51 98.0
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 5.2e-20 102.1 105 56.2
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.2e-19 100.9 52 92.3
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 7.0e-17 91.7 62 72.6
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.6e-16 90.5 102 51.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 5.9e-16 88.6 101 52.5
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.3e-15 87.4 60 71.7
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 3.7e-10 69.3 63 52.4


User provided reference genes

Program Settings