Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.1e-83 312.4 167 100.0
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 1.0e-77 293.5 167 91.6
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 3.9e-77 291.6 167 91.0
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 1.5e-76 289.7 167 91.0
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 2.4e-74 282.3 167 87.4
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 4.2e-71 271.6 167 85.0
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 1.2e-70 270.0 168 83.9
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.7e-70 268.9 168 82.7
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 6.0e-70 267.7 169 85.2
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 6.0e-70 267.7 168 82.1
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 6.0e-70 267.7 167 84.4
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 1.0e-69 266.9 167 83.8
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.3e-69 266.5 168 82.7
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 1.7e-69 266.2 167 80.8
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.9e-69 265.0 168 82.1
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.9e-68 262.7 168 82.1
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 3.3e-68 261.9 161 83.9
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 4.3e-68 261.5 168 81.5
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 9.6e-68 260.4 168 81.0
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 1.6e-67 259.6 167 81.4
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 4.8e-67 258.1 169 79.9
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 4.8e-67 258.1 168 81.5
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 6.2e-67 257.7 168 81.0
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 8.1e-67 257.3 167 79.0
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 2.4e-66 255.8 169 80.5
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 4.0e-66 255.0 167 78.4
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 5.3e-66 254.6 171 79.5
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 5.3e-66 254.6 169 77.5
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 5.3e-66 254.6 167 77.8
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 9.0e-66 253.8 171 78.9
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.0e-65 252.7 169 77.5
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 2.6e-65 252.3 167 77.2
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 9.9e-65 250.4 169 77.5
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-64 250.0 168 78.0
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 1.7e-64 249.6 167 76.6
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.7e-64 249.6 170 77.6
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.2e-64 249.2 169 78.1
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 2.9e-64 248.8 169 79.9
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 2.9e-64 248.8 167 75.4
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 4.9e-64 248.1 167 75.4
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 8.4e-64 247.3 169 76.3
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 1.1e-63 246.9 169 76.9
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 1.4e-63 246.5 167 75.4
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.9e-63 246.1 169 77.5
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.9e-63 246.1 169 77.5
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 5.4e-63 244.6 163 78.5
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 7.1e-63 244.2 170 75.9
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 7.1e-63 244.2 170 75.3
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 9.3e-63 243.8 167 74.9
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.2e-62 243.4 170 75.9
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.1e-62 242.7 167 73.1
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 2.7e-62 242.3 167 76.0
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 2.7e-62 242.3 169 79.3
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 2.7e-62 242.3 168 75.0
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 3.5e-62 241.9 168 76.8
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 6.0e-62 241.1 172 75.6
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-61 240.0 168 73.8
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 3.9e-61 238.4 169 75.1
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 5.1e-61 238.0 168 76.8
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 1.1e-60 236.9 167 73.7
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 1.5e-60 236.5 169 75.1
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 4.3e-60 235.0 169 75.1
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 5.6e-60 234.6 171 76.6
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 9.6e-60 233.8 170 72.4
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 9.6e-60 233.8 169 73.4
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.6e-59 233.0 173 74.6
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 2.1e-59 232.6 167 73.7
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 2.8e-59 232.3 170 73.5
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 3.7e-59 231.9 169 72.2
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 3.7e-59 231.9 171 73.1
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 3.7e-59 231.9 153 79.1
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 8.1e-59 230.7 169 72.2
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.4e-58 229.9 164 73.2
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 1.8e-58 229.6 170 72.9
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 3.1e-58 228.8 167 72.5
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 9.0e-58 227.3 169 72.2
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.2e-57 226.9 170 71.8
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 2.6e-57 225.7 168 72.0
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 2.6e-57 225.7 167 71.9
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 3.4e-57 225.3 168 69.0
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 4.5e-57 224.9 166 70.5
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.7e-56 223.0 171 69.0
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 2.2e-56 222.6 169 70.4
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 2.9e-56 222.2 161 72.7
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 6.4e-56 221.1 169 68.6
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 6.4e-56 221.1 169 68.0
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 6.4e-56 221.1 170 70.0
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 8.4e-56 220.7 169 68.0
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 1.1e-55 220.3 168 69.6
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 3.2e-55 218.8 168 69.0
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 4.2e-55 218.4 172 67.4
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 4.2e-55 218.4 172 69.2
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 4.2e-55 218.4 170 68.2
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 4.2e-55 218.4 167 69.5
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 5.5e-55 218.0 163 68.1
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 5.5e-55 218.0 169 67.5
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 9.3e-55 217.2 169 66.9
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 1.2e-54 216.9 169 66.9
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 1.2e-54 216.9 167 67.7
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 1.2e-54 216.9 167 67.7
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.2e-54 216.9 168 68.5
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 66.3
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 66.9
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 66.9
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 66.3
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 167 67.1
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 66.9
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.7e-54 215.7 172 66.3
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 2.7e-54 215.7 167 67.1
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.7e-54 215.7 167 66.5
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 4.6e-54 214.9 156 69.9
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 6.0e-54 214.5 168 67.3
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 6.0e-54 214.5 168 67.3
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 7.9e-54 214.2 168 67.3
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 1.0e-53 213.8 170 71.2
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 1.0e-53 213.8 171 67.8
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 1.0e-53 213.8 171 67.8
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-53 213.4 171 66.1
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 3.0e-53 212.2 165 66.1
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 3.0e-53 212.2 171 65.5
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 3.9e-53 211.8 170 67.6
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 3.9e-53 211.8 170 65.9
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 3.9e-53 211.8 168 67.3
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 3.9e-53 211.8 146 76.0
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 5.1e-53 211.5 171 65.5
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 5.1e-53 211.5 171 65.5
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 5.1e-53 211.5 171 65.5
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 6.7e-53 211.1 164 66.5
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.1e-52 210.3 168 64.9
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 1.5e-52 209.9 169 65.7
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 1.5e-52 209.9 169 65.7
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 1.5e-52 209.9 169 65.7
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 3.3e-52 208.8 167 65.9
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 1.3e-51 206.8 170 67.6
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 6.2e-51 204.5 171 64.9
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 6.2e-51 204.5 170 66.5
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.4e-50 203.4 162 67.3
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.6e-49 199.1 169 65.1
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 2.1e-46 189.5 102 88.2
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 3.0e-45 185.7 100 88.0
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.1e-44 183.7 102 83.3
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 1.3e-40 170.2 168 60.1
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 1.7e-40 169.9 100 80.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.9e-40 169.1 158 59.5
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 3.2e-39 165.6 169 58.6
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 1.2e-38 163.7 168 57.7
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 1.8e-37 159.8 217 47.9
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 3.0e-37 159.1 141 62.4
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.2e-35 152.9 171 50.3
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.2e-33 147.1 167 49.7
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 2.6e-33 146.0 175 48.6
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 2.2e-32 142.9 174 47.1
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.1e-30 136.3 171 46.2
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 6.1e-30 134.8 178 55.1
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 7.9e-30 134.4 171 49.1
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 7.4e-28 127.9 132 50.8
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 9.7e-28 127.5 140 50.7
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.3e-26 121.7 70 77.1
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 2.6e-25 119.4 154 46.8
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.6e-25 119.4 70 74.3
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 2.9e-24 115.9 168 43.5
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 8.8e-21 104.4 67 73.1
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-19 100.5 82 62.2
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 3.2e-15 85.9 44 86.4
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 1.1e-10 70.9 69 66.7
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 4.5e-09 65.5 62 62.9


User provided reference genes

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