Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G075900 Carya illinoinensis HOM05D002593 ORTHO05D006476 9.6e-189 663.3 328 100.0
QL01p049838 Quercus lobata HOM05D002593 ORTHO05D006476 4.1e-155 551.6 320 86.6
Actinidia06597 Actinidia chinensis HOM05D002593 ORTHO05D006476 1.6e-143 513.1 328 78.4
MD05G1249400 Malus domestica HOM05D002593 ORTHO05D006476 1.0e-142 510.4 329 77.2
CANSAT01G0469 Cannabis sativa HOM05D002593 ORTHO05D006476 4.0e-142 508.4 329 79.0
RcHm_v2.0_Chr5g0020561 Rosa chinensis HOM05D002593 ORTHO05D006476 4.0e-142 508.4 329 78.4
Atru.chr4.1131 Acer truncatum HOM05D002593 ORTHO05D006476 2.0e-141 506.1 329 78.1
CSS0033070 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 2.0e-141 506.1 328 78.0
Eucgr.I00094 Eucalyptus grandis HOM05D002593 ORTHO05D006476 1.7e-140 503.1 329 77.5
CSS0004310 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 2.8e-140 502.3 328 77.4
FAN16G0380 Fragaria x ananassa HOM05D002593 ORTHO05D006476 4.9e-140 501.5 328 75.9
FAN16G0459 Fragaria x ananassa HOM05D002593 ORTHO05D006476 4.9e-140 501.5 328 75.9
Lalb_Chr23g0272731 Lupinus albus HOM05D002593 ORTHO05D006476 4.9e-140 501.5 331 77.9
Potri.005G070700 Populus trichocarpa HOM05D002593 ORTHO05D006476 4.9e-140 501.5 329 77.5
TAR381G0271 Trochodendron aralioides HOM05D002593 ORTHO05D006476 1.4e-139 500.0 333 76.6
TAR381G0660 Trochodendron aralioides HOM05D002593 ORTHO05D006476 1.4e-139 500.0 333 76.6
PGR119G1937 Punica granatum HOM05D002593 ORTHO05D006476 3.1e-139 498.8 331 76.1
FAN25G3668 Fragaria x ananassa HOM05D002593 ORTHO05D006476 4.1e-139 498.4 328 75.3
FvH4_3g12600 Fragaria vesca HOM05D002593 ORTHO05D006476 9.2e-139 497.3 329 76.3
Rhsim10G0129800 Rhododendron simsii HOM05D002593 ORTHO05D006476 2.7e-138 495.7 325 76.6
GSVIVG01022377001 Vitis vinifera HOM05D002593 ORTHO05D006476 4.5e-138 495.0 330 76.7
Sabra05G0057500 Salix brachista HOM05D002593 ORTHO05D006476 2.9e-137 492.3 330 75.8
Psat7g043240 Pisum sativum HOM05D002593 ORTHO05D006476 1.1e-136 490.3 331 76.1
Lalb_Chr12g0202891 Lupinus albus HOM05D002593 ORTHO05D006476 1.5e-136 490.0 333 75.1
Duzib187G0031 Durio zibethinus HOM05D002593 ORTHO05D006476 2.5e-136 489.2 333 77.2
Hma1.2p1_0619F.1_g190360 Hydrangea macrophylla HOM05D002593 ORTHO05D006476 9.5e-136 487.3 329 75.7
Aqoxy6G00211 Aquilegia oxysepala HOM05D002593 ORTHO05D006476 1.2e-135 486.9 329 73.9
CsaV3_4G031190 Cucumis sativus L. HOM05D002593 ORTHO05D006476 1.6e-135 486.5 329 75.1
Oeu042316.1 Olea europaea HOM05D002593 ORTHO05D006476 2.1e-135 486.1 328 74.4
ClCG04G001200 Citrullus lanatus HOM05D002593 ORTHO05D006476 2.8e-135 485.7 329 74.5
Lj4g0024429 Lotus japonicus HOM05D002593 ORTHO05D006476 2.8e-135 485.7 331 76.1
Ciclev10000418m.g Citrus clementina HOM05D002593 ORTHO05D006476 1.4e-134 483.4 333 74.8
Cpa.g.sc37.46 Carica papaya HOM05D002593 ORTHO05D006476 1.8e-134 483.0 325 76.0
Lj1A109G43 Lonicera japonica HOM05D002593 ORTHO05D006476 2.3e-134 482.6 330 76.1
MELO3C008996.2 Cucumis melo HOM05D002593 ORTHO05D006476 8.9e-134 480.7 329 74.2
Thecc.01G142600 Theobroma cacao HOM05D002593 ORTHO05D006476 1.2e-133 480.3 330 75.5
Glyma.08G003500 Glycine max HOM05D002593 ORTHO05D006476 1.5e-133 479.9 331 74.9
Ca_17607_v3 Cicer arietinum L. HOM05D002593 ORTHO05D006476 5.7e-133 478.0 331 75.5
Glyma.05G195900 Glycine max HOM05D002593 ORTHO05D006476 9.8e-133 477.2 331 74.9
Hund21782 Selenicereus undatus HOM05D002593 ORTHO05D006476 1.7e-132 476.5 336 72.3
TWI79G0542 Tripterygium wilfordii HOM05D002593 ORTHO05D006476 1.7e-132 476.5 329 73.3
Phvul.002G276400 Phaseolus vulgaris HOM05D002593 ORTHO05D006476 2.2e-132 476.1 331 74.3
Peaxi162Scf00076g01057 Petunia axillaris HOM05D002593 ORTHO05D006476 6.4e-132 474.6 329 74.5
DCAR_000693 Daucus carota HOM05D002593 ORTHO05D006476 1.4e-131 473.4 328 73.5
Gohir.D09G005200 Gossypium hirsutum HOM05D002593 ORTHO05D006476 1.4e-131 473.4 333 75.4
Phvul.009G151900 Phaseolus vulgaris HOM05D002593 ORTHO05D006476 1.4e-131 473.4 329 74.5
Sed0011819 Sechium edule HOM05D002593 ORTHO05D006476 1.4e-131 473.4 331 72.5
Medtr8g094800 Medicago truncatula HOM05D002593 ORTHO05D006476 5.4e-131 471.5 332 73.8
Glyma.04G207200 Glycine max HOM05D002593 ORTHO05D006476 7.0e-131 471.1 329 74.2
Gorai.006G006800 Gossypium raimondii HOM05D002593 ORTHO05D006476 7.0e-131 471.1 333 75.4
COL.COLO4_12118 Corchorus olitorius HOM05D002593 ORTHO05D003294 2.0e-130 469.5 329 74.5
Cc11_g02090 Coffea canephora HOM05D002593 ORTHO05D006476 2.7e-130 469.2 328 71.0
Gohir.A09G006100 Gossypium hirsutum HOM05D002593 ORTHO05D006476 2.7e-130 469.2 333 75.1
vmacro12772 Vaccinium macrocarpon HOM05D002593 ORTHO05D006476 2.7e-130 469.2 341 72.1
VMungo1309G1997 Vigna mungo HOM05D002593 ORTHO05D006476 2.7e-130 469.2 326 74.5
VMungo0251G1864 Vigna mungo HOM05D002593 ORTHO05D006476 3.5e-130 468.8 331 73.1
EL10Ac4g09659 Beta vulgaris HOM05D002593 ORTHO05D006476 4.6e-130 468.4 345 69.3
MSTRG.3600 Avicennia marina HOM05D002593 ORTHO05D006476 5.9e-130 468.0 329 72.9
SGA_v2.0_scaffold244G44338 Striga asiatica HOM05D002593 ORTHO05D006476 1.7e-129 466.5 329 72.0
CAN.G610.52 Capsicum annuum HOM05D002593 ORTHO05D006476 3.0e-129 465.7 329 72.3
Migut.L00269 Erythranthe guttata HOM05D002593 ORTHO05D006476 3.9e-129 465.3 330 70.3
SalBow7G4483 Salvia bowleyana HOM05D002593 ORTHO05D006476 1.1e-128 463.8 328 70.7
Solyc05g009080.4 Solanum lycopersicum HOM05D002593 ORTHO05D006476 1.9e-128 463.0 328 71.6
arahy.Tifrunner.gnm1.ann1.2HG3UE Arachis hypogaea HOM05D002593 ORTHO05D006476 2.5e-128 462.6 335 73.4
arahy.Tifrunner.gnm1.ann1.VT8BG2 Arachis hypogaea HOM05D002593 ORTHO05D006476 2.5e-128 462.6 335 73.4
PSO170G1422 Papaver somniferum HOM05D002593 ORTHO05D006476 3.3e-128 462.2 337 69.7
PSO528G0279 Papaver somniferum HOM05D002593 ORTHO05D006476 4.3e-128 461.8 337 69.4
arahy.Tifrunner.gnm1.ann1.3HC2CW Arachis hypogaea HOM05D002593 ORTHO05D006476 5.6e-128 461.5 332 72.3
TWI31G0641 Tripterygium wilfordii HOM05D002593 ORTHO05D006476 5.6e-128 461.5 329 73.3
arahy.Tifrunner.gnm1.ann1.06HUX3 Arachis hypogaea HOM05D002593 ORTHO05D006476 1.6e-127 459.9 332 72.0
PGSC0003DMG401014557 Solanum tuberosum HOM05D002593 ORTHO05D006476 1.6e-127 459.9 328 71.3
Sopen05g004810 Solanum pennellii HOM05D002593 ORTHO05D006476 2.1e-127 459.5 328 71.3
AUR62000559 Chenopodium quinoa HOM05D002593 ORTHO05D006476 3.6e-127 458.8 333 70.3
CARHR204290 Cardamine hirsuta HOM05D002593 ORTHO05D006476 1.8e-126 456.4 336 70.5
AUR62006910 Chenopodium quinoa HOM05D002593 ORTHO05D006476 4.0e-126 455.3 335 69.9
Dinv07259 Davidia involucrata HOM05D002593 ORTHO05D006476 6.8e-126 454.5 299 77.6
Sp6g34150 Schrenkiella parvula HOM05D002593 ORTHO05D006476 1.2e-125 453.8 333 70.0
Haze_16323 Corylus avellana HOM05D002593 ORTHO05D006476 1.5e-125 453.4 306 79.4
A10p28060 Brassica napus HOM05D002593 ORTHO05D006476 2.0e-125 453.0 333 70.9
BraA10t44855Z Brassica rapa HOM05D002593 ORTHO05D006476 5.8e-125 451.4 333 70.9
AL6G19470 Arabidopsis lyrata HOM05D002593 ORTHO05D006476 9.8e-125 450.7 335 69.0
Carub.0006s0769 Capsella rubella HOM05D002593 ORTHO05D006476 9.8e-125 450.7 336 69.9
AT5G08720 Arabidopsis thaliana HOM05D002593 ORTHO05D006476 1.7e-124 449.9 336 70.5
BcaB08g37230 Brassica carinata HOM05D002593 ORTHO05D006476 2.2e-124 449.5 336 69.6
C09p68260 Brassica napus HOM05D002593 ORTHO05D006476 2.2e-124 449.5 336 69.6
BolC9t59574H Brassica oleracea HOM05D002593 ORTHO05D006476 2.2e-124 449.5 336 69.6
Sc06g0005350 Simmondsia chinensis HOM05D002593 ORTHO05D006476 2.9e-124 449.1 328 71.0
Aa31LG3G17840 Aethionema arabicum HOM05D002593 ORTHO05D006476 7.0e-123 444.5 344 67.4
Hma1.2p1_0619F.1_g190380 Hydrangea macrophylla HOM05D002593 ORTHO05D006476 9.2e-123 444.1 294 76.9
Ah.06g188520 Amaranthus hybridus HOM05D002593 ORTHO05D006476 3.0e-121 439.1 334 69.2
ECA248G3631 Erigeron canadensis HOM05D002593 ORTHO05D006476 1.6e-119 433.3 332 67.5
HanXRQChr03g0087641 Helianthus annuus HOM05D002593 ORTHO05D006476 8.9e-118 427.6 328 66.5
Manes.12G083900 Manihot esculenta HOM05D002593 ORTHO05D006476 1.2e-117 427.2 274 79.2
Lsat_1_v5_gn_1_80920 Lactuca sativa HOM05D002593 ORTHO05D006476 1.3e-116 423.7 328 68.3
TPR.G37380 Trifolium pratense HOM05D002593 ORTHO05D006476 2.1e-114 416.4 290 73.8
Os03g0837900 Oryza sativa ssp. japonica HOM05D002593 ORTHO05D006476 5.1e-113 411.8 329 64.4
unitig_899.g14455 Utricularia gibba HOM05D002593 ORTHO05D006476 2.5e-112 409.5 336 64.6
Thhalv10015845m.g Eutrema salsugineum HOM05D002593 ORTHO05D006476 8.4e-108 394.4 336 63.4
HPP92_025044 Vanilla planifolia HOM05D002593 ORTHO05D006476 1.3e-105 387.1 307 64.8
Nitab4.5_0002512g0060 Nicotiana tabacum HOM05D002593 ORTHO05D006476 8.6e-105 384.4 434 52.3
Cfa002121 Carpinus fangiana HOM05D002593 ORTHO05D006476 1.4e-99 367.1 224 84.8
Prupe.4G114800 Prunus persica HOM05D002593 ORTHO05D006476 5.6e-96 355.1 223 80.7
Actinidia20056 Actinidia chinensis HOM05D002593 ORTHO05D006476 2.1e-90 336.7 274 65.7
Glyma.06G158400 Glycine max HOM05D002593 ORTHO05D006476 3.6e-87 325.9 224 73.7
Zm00001eb063890 Zea mays HOM05D002593 ORTHO05D006476 9.9e-85 317.8 249 64.7
Eucgr.I00052 Eucalyptus grandis HOM05D002593 ORTHO05D006476 1.3e-81 307.4 212 75.5
PGSC0003DMG400012080 Solanum tuberosum HOM05D002593 ORTHO05D006476 8.7e-81 304.7 224 69.6
ATR0584G276 Amborella trichopoda HOM05D002593 ORTHO05D006476 3.3e-80 302.8 227 68.3
arahy.Tifrunner.gnm1.ann1.DM3640 Arachis hypogaea HOM05D002593 ORTHO05D006476 7.6e-77 291.6 248 62.5
AagrBONN_evm.TU.Sc2ySwM_117.116 Anthoceros agrestis HOM05D002593 ORTHO05D006476 1.3e-76 290.8 278 55.8
Pp3c16_9330 Physcomitrium patens HOM05D002593 ORTHO05D006476 1.7e-76 290.4 331 50.2
Mapoly0148s0001 Marchantia polymorpha HOM05D002593 ORTHO05D006476 1.1e-72 277.7 273 54.2
SMO230G0109 Selaginella moellendorffii HOM05D002593 ORTHO05D006476 5.9e-69 265.4 273 50.9
CDE02G1715 Ceratophyllum demersum HOM05D002593 ORTHO05D006476 2.6e-61 240.0 162 72.2
CBR_g48801 Chara braunii HOM05D002593 ORTHO05D006476 2.0e-56 223.8 313 41.5
SEGI_22974 Sequoiadendron giganteum HOM05D002593 ORTHO05D006476 7.7e-53 211.8 188 56.9
CDE08G0854 Ceratophyllum demersum HOM05D002593 ORTHO05D006476 3.6e-50 203.0 169 62.1
CSS0002822 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 2.0e-40 170.6 92 89.1
Cfa002122 Carpinus fangiana HOM05D002593 ORTHO05D006476 7.5e-40 168.7 97 83.5
CDE02G1036 Ceratophyllum demersum HOM05D002593 ORTHO05D006476 7.2e-35 152.1 108 72.2
CSS0038308 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 3.6e-26 123.2 81 75.3
CSS0001259 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D006476 1.0e-25 121.7 81 74.1
FAN26G1490 Fragaria x ananassa HOM05D002593 ORTHO05D006476 5.7e-24 115.9 69 78.3
PGSC0003DMG402014557 Solanum tuberosum HOM05D002593 ORTHO05D006476 1.8e-22 110.9 82 70.7
PRCOL_00005747 Prasinoderma coloniale HOM05D002593 ORTHO05D006476 4.1e-22 109.8 296 28.0
Cc11_g02630 Coffea canephora HOM05D002593 ORTHO05D006476 7.5e-16 89.0 49 79.6
arahy.Tifrunner.gnm1.ann1.898NT1 Arachis hypogaea HOM05D002593 ORTHO05D006476 8.0e-10 68.9 73 56.2
SEGI_39457 Sequoiadendron giganteum HOM05D002593 ORTHO05D006476 4.9e-07 59.7 46 56.5
AagrBONN_evm.TU.Sc2ySwM_344.627 Anthoceros agrestis HOM05D015006 ORTHO05D015881 8.3e-07 58.9 178 27.0


User provided reference genes

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