Gene: Solyc05g009080.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g009080.4
  • Transcript Identifier Solyc05g009080.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 3271262-3275356 : negative

Gene Family Information

  • ID HOM05D002593
  • #Genes/#Species 263/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g009080.4.1
  • uniprot A0A3Q7H6R7
  • gene_id Solyc05g009080

Descriptions

  • Description Cyclase/dehydrase family protein (AHRD V3.3 *** A0A2K3P6S6_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042548
ISO
PLAZA Integrative Orthologyregulation of photosynthesis, light reaction AT5G08720
GO:0031426
ISO
PLAZA Integrative Orthologypolycistronic mRNA processing AT5G08720
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT5G08720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G08720
GO:0048027
ISO
PLAZA Integrative OrthologymRNA 5'-UTR binding AT5G08720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G08720
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G08720
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT5G08720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005031 Coenzyme Q-binding protein COQ10, START domain
IPR023393 START-like domain superfamily
Mapman id Description
35.1 not assigned.annotated