Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G021600 Carya illinoinensis HOM05D003666 ORTHO05D004770 2.3e-88 328.9 172 100.0
FAN09G4889 Fragaria x ananassa HOM05D003666 ORTHO05D004770 2.4e-82 308.9 172 93.6
RcHm_v2.0_MTg0498681 Rosa chinensis HOM05D003666 ORTHO05D004770 2.4e-82 308.9 172 93.6
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 9.2e-82 307.0 172 93.0
Potri.007G061881 Populus trichocarpa HOM05D003666 ORTHO05D004770 2.3e-80 302.4 172 92.4
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 2.3e-80 302.4 172 92.4
SHI36046 Sapria himalayana HOM05D003666 ORTHO05D004770 4.3e-79 298.1 172 91.3
Solyc00g500171.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 9.5e-79 297.0 172 91.3
Solyc00g500188.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 9.5e-79 297.0 172 91.3
Solyc00g500252.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 9.5e-79 297.0 172 91.3
Sopen11g018260 Solanum pennellii HOM05D003666 ORTHO05D004770 9.5e-79 297.0 172 91.3
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 2.8e-78 295.4 172 90.7
Nn1g09957 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.9e-77 290.4 172 89.5
Nn1g09958 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.9e-77 290.4 172 89.5
Nn1g10168 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.9e-77 290.4 172 89.5
unitig_87.g28022 Utricularia gibba HOM05D003666 ORTHO05D004770 6.4e-75 284.3 159 91.2
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 1.1e-71 273.5 169 87.6
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 1.5e-71 273.1 158 91.1
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 1.5e-71 273.1 158 91.1
Lalb_Chr00c24g0407381 Lupinus albus HOM05D003666 ORTHO05D004770 1.5e-71 273.1 158 91.1
Lalb_Chr02g0154061 Lupinus albus HOM05D003666 ORTHO05D004770 7.3e-71 270.8 158 90.5
Nitab4.5_0000085g0130 Nicotiana tabacum HOM05D003666 ORTHO05D004770 6.2e-70 267.7 164 86.6
FAN09G2550 Fragaria x ananassa HOM05D003666 ORTHO05D004770 5.8e-68 261.2 155 87.7
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 1.2e-65 253.4 159 86.8
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.2e-65 253.4 159 86.8
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.2e-65 253.4 159 86.8
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 1.2e-65 253.4 159 86.8
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 1.6e-65 253.1 147 91.8
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 2.7e-65 252.3 147 91.8
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 2.7e-65 252.3 147 91.8
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 6.0e-65 251.1 147 91.8
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 1.7e-64 249.6 144 93.1
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 2.3e-64 249.2 159 85.5
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 4.3e-63 245.0 143 90.9
FAN09G4847 Fragaria x ananassa HOM05D003666 ORTHO05D004770 1.1e-61 240.4 148 89.9
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.4e-61 240.0 143 90.2
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 1.8e-61 239.6 162 80.9
CiPaw.15G113100 Carya illinoinensis HOM05D003666 ORTHO05D004770 1.2e-60 236.9 172 75.0
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 2.6e-60 235.7 142 90.1
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 5.8e-60 234.6 142 89.4
CDE02G3669 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 9.9e-60 233.8 138 91.3
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.3e-59 233.4 159 81.8
TAR626G0972 Trochodendron aralioides HOM05D003666 ORTHO05D004770 6.4e-59 231.1 157 82.8
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 4.6e-57 224.9 133 87.2
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 1.0e-56 223.8 142 86.6
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 2.5e-55 219.2 126 90.5
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.3e-55 218.4 146 81.5
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.3e-55 218.4 146 81.5
Gohir.A08G104701 Gossypium hirsutum HOM05D003666 ORTHO05D004770 4.8e-54 214.9 126 87.3
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 2.9e-51 205.7 147 79.6
SEGI_01871 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.3e-48 196.1 152 75.0
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.5e-47 193.4 146 76.7
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 1.1e-39 167.2 96 90.6
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 3.3e-39 165.6 96 89.6
Lalb_Chr00c54g0413591 Lupinus albus HOM05D003666 ORTHO05D004770 4.8e-38 161.8 144 69.4
Dinv06696 Davidia involucrata HOM05D003666 ORTHO05D016272 1.3e-35 153.7 92 88.0
Nitab4.5_0000172g1340 Nicotiana tabacum HOM05D003666 ORTHO05D004770 5.9e-28 128.3 82 84.1
BcaC05g26876 Brassica carinata HOM05D003666 ORTHO05D004770 1.0e-27 127.5 77 87.0
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 1.1e-26 124.0 129 46.5
Migut.L00682 Erythranthe guttata HOM05D003666 ORTHO05D004770 2.1e-25 119.8 104 69.2
Nitab4.5_0000172g1330 Nicotiana tabacum HOM05D003666 ORTHO05D016272 4.6e-25 118.6 75 80.0
Pp3c2_30660 Physcomitrium patens HOM05D003666 ORTHO05D004770 1.3e-22 110.5 71 85.9
Gohir.A11G199666 Gossypium hirsutum HOM05D003666 ORTHO05D004770 4.8e-22 108.6 62 91.9
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 2.4e-21 106.3 173 45.1
GSVIVG01029664001 Vitis vinifera HOM05D003666 ORTHO05D004770 1.2e-20 104.0 54 90.7
Solyc11g030570.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.0e-20 103.2 63 82.5
Nitab4.5_0010687g0060 Nicotiana tabacum HOM05D003666 ORTHO05D036870 1.7e-19 100.1 55 89.1
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 2.1e-17 93.2 129 38.8
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.1e-17 93.2 129 38.8
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 6.1e-17 91.7 129 38.8
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 7.9e-17 91.3 141 37.6
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 7.9e-17 91.3 129 38.8
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.0e-16 90.9 129 38.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.0e-16 90.9 129 38.0
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 1.0e-16 90.9 129 38.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.0e-16 90.9 129 38.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.0e-16 90.9 129 38.0
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 1.0e-16 90.9 129 38.8
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.8e-16 90.1 129 37.2
Pp3c6_27070 Physcomitrium patens HOM05D003666 ORTHO05D004770 1.8e-16 90.1 62 79.0
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.8e-16 90.1 129 38.8
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 2.3e-16 89.7 141 36.9
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.9e-16 89.0 141 36.9
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 5.1e-16 88.6 129 38.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.1e-15 87.4 113 40.7
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.5e-15 87.0 129 38.0
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 1.5e-15 87.0 129 37.2
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 2.0e-15 86.7 141 36.9
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-15 86.7 129 38.0
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 2.0e-15 86.7 129 38.0
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 2.6e-15 86.3 141 36.9
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 3.3e-15 85.9 113 40.7
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 3.3e-15 85.9 127 35.4
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 3.3e-15 85.9 129 34.1
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 5.7e-15 85.1 129 36.4
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 7.4e-15 84.7 141 36.9
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 7.4e-15 84.7 141 36.9
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 7.4e-15 84.7 141 36.9
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 7.4e-15 84.7 129 37.2
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 9.7e-15 84.3 141 36.9
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 9.7e-15 84.3 141 36.9
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 9.7e-15 84.3 141 36.9
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 4.8e-14 82.0 114 40.4
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 6.3e-14 81.6 141 36.2
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 2.0e-12 76.6 117 36.8
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 2.6e-12 76.3 142 37.3
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 3.4e-12 75.9 129 34.1
Hma1.2p1_0402F.1_g145120 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 4.5e-12 75.5 51 84.3
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 3.2e-10 69.3 100 35.0
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 2.1e-09 66.6 105 34.3
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 8.0e-09 64.7 122 32.8
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.0e-09 64.7 39 74.4
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-08 63.9 89 36.0
BolSC44t60820H Brassica oleracea HOM05D001200 ORTHO05D002731 1.8e-08 63.5 92 39.1
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 3.0e-08 62.8 122 33.6
Nitab4.5_0000172g0150 Nicotiana tabacum HOM05D016892 ORTHO05D016272 5.2e-08 62.0 41 75.6
Nitab4.5_0001346g0060 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-07 60.8 34 82.4
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.5e-07 60.5 105 31.4
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 2.6e-07 59.7 55 56.4
RcHm_v2.0_CPg0502801 Rosa chinensis HOM05D001200 ORTHO05D002731 2.6e-07 59.7 76 42.1
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 7.4e-07 58.2 93 31.2
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 9.7e-07 57.8 76 40.8
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 1.3e-06 57.4 145 31.0
Pp3c23_19840 Physcomitrium patens HOM05D003666 ORTHO05D004770 2.2e-06 56.6 37 70.3
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 4.8e-06 55.5 92 34.8
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 6.3e-06 55.1 112 40.2


User provided reference genes

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