Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.3e-93 345.5 168 100.0
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 5.0e-56 221.5 180 64.4
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 8.5e-56 220.7 174 66.1
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 2.3e-53 212.6 171 66.1
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 4.3e-52 208.4 168 66.7
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 2.8e-51 205.7 168 59.5
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.1e-50 203.8 162 62.3
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 5.3e-50 201.4 155 66.5
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 4.5e-49 198.4 112 82.1
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 2.9e-48 195.7 182 59.3
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.8e-48 195.3 131 68.7
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 6.5e-48 194.5 164 62.2
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 6.5e-48 194.5 162 60.5
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 1.1e-47 193.7 113 77.9
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 1.1e-47 193.7 154 61.0
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 3.2e-47 192.2 131 69.5
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 7.2e-47 191.0 127 70.1
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.2e-46 190.3 114 76.3
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 1.6e-46 189.9 126 70.6
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 2.1e-46 189.5 173 59.0
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.6e-46 188.7 132 66.7
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 7.9e-46 187.6 177 57.1
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 7.9e-46 187.6 263 44.9
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.0e-45 187.2 175 57.7
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.3e-45 186.0 108 76.9
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 8.8e-45 184.1 166 58.4
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 1.1e-44 183.7 170 58.2
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.1e-44 183.7 170 58.2
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 1.1e-44 183.7 136 64.0
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 2.0e-44 183.0 183 55.7
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 2.0e-44 183.0 136 63.2
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.6e-44 182.6 109 74.3
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 4.4e-44 181.8 157 58.0
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.7e-43 179.9 165 55.8
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 1.7e-43 179.9 170 57.6
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.7e-43 179.9 158 54.4
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 2.8e-43 179.1 132 63.6
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 3.7e-43 178.7 286 41.3
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 6.3e-43 177.9 165 55.8
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 6.3e-43 177.9 177 55.9
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 6.3e-43 177.9 169 56.8
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 8.2e-43 177.6 158 58.2
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.5e-41 172.2 145 60.7
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 5.9e-41 171.4 156 58.3
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 5.9e-41 171.4 165 49.7
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 7.7e-41 171.0 115 67.0
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 2.2e-40 169.5 108 73.1
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 2.2e-40 169.5 156 58.3
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 3.8e-40 168.7 178 51.7
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 5.0e-40 168.3 162 51.9
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 5.0e-40 168.3 99 75.8
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 1.9e-39 166.4 169 52.7
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 3.2e-39 165.6 121 68.6
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 7.2e-39 164.5 170 51.8
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 2.7e-38 162.5 183 47.5
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 4.7e-38 161.8 187 46.0
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.0e-37 160.6 107 69.2
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 4.0e-37 158.7 144 58.3
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.3e-36 155.6 105 63.8
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 9.7e-36 154.1 141 55.3
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 3.7e-35 152.1 108 61.1
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 6.3e-35 151.4 162 45.7
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 8.2e-35 151.0 107 60.7
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.4e-34 150.2 173 45.1
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 1.4e-34 150.2 108 63.0
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.8e-34 149.8 126 55.6
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 2.4e-34 149.4 137 54.7
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 2.4e-34 149.4 113 58.4
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 4.1e-34 148.7 130 55.4
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 4.1e-34 148.7 111 59.5
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 4.1e-34 148.7 111 59.5
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 5.3e-34 148.3 161 47.2
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 5.3e-34 148.3 108 62.0
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 5.3e-34 148.3 108 61.1
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 7.0e-34 147.9 107 61.7
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 7.0e-34 147.9 149 49.7
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 9.1e-34 147.5 107 57.0
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 9.1e-34 147.5 118 56.8
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 9.1e-34 147.5 111 58.6
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.2e-33 147.1 107 57.0
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 1.6e-33 146.7 158 47.5
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 1.6e-33 146.7 105 61.9
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.6e-33 146.7 174 46.0
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.0e-33 146.4 105 61.9
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.7e-33 146.0 105 62.9
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 3.5e-33 145.6 154 46.1
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 3.5e-33 145.6 107 57.0
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 3.5e-33 145.6 106 61.3
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.5e-33 145.6 107 59.8
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 4.5e-33 145.2 168 48.2
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 4.5e-33 145.2 107 59.8
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 4.5e-33 145.2 107 59.8
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 5.9e-33 144.8 107 60.7
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 5.9e-33 144.8 118 55.1
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 5.9e-33 144.8 108 54.6
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 7.7e-33 144.4 105 61.0
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.0e-32 144.1 108 60.2
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.0e-32 144.1 125 53.6
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.3e-32 143.7 131 53.4
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.3e-32 143.7 105 61.9
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.7e-32 143.3 105 61.0
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.7e-32 143.3 107 56.1
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.2e-32 142.9 105 61.9
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 2.2e-32 142.9 112 58.0
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 2.9e-32 142.5 105 60.0
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 3.8e-32 142.1 107 57.9
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 3.8e-32 142.1 165 46.1
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 3.8e-32 142.1 121 56.2
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 5.0e-32 141.7 109 58.7
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 5.0e-32 141.7 108 56.5
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 6.5e-32 141.4 166 45.8
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 6.5e-32 141.4 105 58.1
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 8.5e-32 141.0 108 57.4
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 8.5e-32 141.0 165 45.5
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.5e-31 140.2 148 48.6
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.9e-31 139.8 123 51.2
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.9e-31 139.8 105 59.0
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 1.9e-31 139.8 153 45.1
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 2.5e-31 139.4 111 55.9
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 2.5e-31 139.4 153 44.4
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 2.5e-31 139.4 153 44.4
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 2.5e-31 139.4 153 44.4
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 2.5e-31 139.4 153 44.4
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 2.5e-31 139.4 153 44.4
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 2.5e-31 139.4 105 58.1
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 3.2e-31 139.0 153 44.4
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 4.2e-31 138.7 123 51.2
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 4.2e-31 138.7 123 52.0
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 4.2e-31 138.7 108 57.4
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 4.2e-31 138.7 121 52.1
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 5.5e-31 138.3 103 57.3
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 5.5e-31 138.3 116 57.8
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 5.5e-31 138.3 108 56.5
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 7.2e-31 137.9 123 51.2
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 7.2e-31 137.9 107 57.0
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 7.2e-31 137.9 133 53.4
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 9.4e-31 137.5 161 47.8
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.2e-30 137.1 108 57.4
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.6e-30 136.7 163 46.0
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.6e-30 136.7 161 47.2
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 2.7e-30 136.0 112 54.5
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 2.7e-30 136.0 111 55.0
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 2.7e-30 136.0 108 57.4
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.7e-30 136.0 108 56.5
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 2.7e-30 136.0 168 43.5
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.7e-30 136.0 103 58.3
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 3.6e-30 135.6 146 51.4
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.6e-30 135.6 152 48.0
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.6e-30 135.6 108 56.5
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 4.7e-30 135.2 108 56.5
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 8.0e-30 134.4 110 55.5
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.3e-29 132.9 102 58.8
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 8.8e-29 131.0 122 54.1
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.5e-28 130.2 130 46.9
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 4.4e-28 128.6 112 54.5
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 9.8e-28 127.5 155 41.3
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.3e-27 127.1 105 51.4
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 9.1e-26 120.9 61 88.5
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.9e-24 115.9 93 54.8
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 8.5e-24 114.4 82 68.3
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.6e-22 109.0 108 49.1
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 6.1e-22 108.2 167 40.1
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 6.1e-22 108.2 143 42.0
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 5.0e-16 88.6 79 51.9
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 1.1e-15 87.4 81 53.1
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 1.9e-15 86.7 58 63.8
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.3e-15 85.9 111 45.9
CSS0019058 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 5.6e-15 85.1 129 44.2
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 7.3e-15 84.7 98 51.0
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 6.1e-14 81.6 119 46.2
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 6.1e-14 81.6 59 57.6
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 8.0e-14 81.3 63 55.6
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 6.8e-13 78.2 52 71.2
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 3.4e-12 75.9 93 44.1
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 9.8e-12 74.3 71 52.1
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.2e-11 73.2 98 39.8
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 2.2e-11 73.2 58 55.2
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 8.3e-11 71.2 127 36.2
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 2.4e-10 69.7 53 60.4
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 9.2e-10 67.8 98 39.8
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 1.6e-09 67.0 61 49.2
TPR.G36109 Trifolium pratense HOM05D003884 ORTHO05D004482 2.5e-07 59.7 66 47.0


User provided reference genes

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