Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G067300 Carya illinoinensis HOM05D005908 ORTHO05D007235 5.2e-162 574.3 290 100.0
QL09p014976 Quercus lobata HOM05D005908 ORTHO05D007235 7.6e-121 437.6 283 79.2
Cfa008281 Carpinus fangiana HOM05D005908 ORTHO05D007235 2.5e-111 406.0 229 86.0
Actinidia32893 Actinidia chinensis HOM05D005908 ORTHO05D007235 6.9e-106 387.9 292 67.8
Dinv35179 Davidia involucrata HOM05D005908 ORTHO05D007235 4.2e-103 378.6 252 73.0
GSVIVG01010617001 Vitis vinifera HOM05D005908 ORTHO05D007235 2.1e-102 376.3 283 67.5
MD13G1243600 Malus domestica HOM05D005908 ORTHO05D007235 3.6e-102 375.6 286 67.8
CANSAT21G0021 Cannabis sativa HOM05D005908 ORTHO05D007235 1.1e-100 370.5 284 66.5
TAR375G0795 Trochodendron aralioides HOM05D005908 ORTHO05D007235 5.7e-100 368.2 284 65.5
CANSAT21G0323 Cannabis sativa HOM05D005908 ORTHO05D007235 7.4e-100 367.9 284 66.2
RcHm_v2.0_Chr1g0376741 Rosa chinensis HOM05D005908 ORTHO05D007235 1.3e-99 367.1 283 67.8
Lj1A993G71 Lonicera japonica HOM05D005908 ORTHO05D007235 8.2e-99 364.4 284 66.2
ClCG05G007830 Citrullus lanatus HOM05D005908 ORTHO05D007235 2.4e-98 362.8 269 67.7
Atru.chr1.515 Acer truncatum HOM05D005908 ORTHO05D007235 9.0e-98 360.9 284 65.8
vmacro08977 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.5e-97 360.1 282 63.8
Haze_13753 Corylus avellana HOM05D005908 ORTHO05D007235 5.9e-97 358.2 221 81.4
TWI23G0151 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 1.0e-96 357.5 288 63.2
TWI39G0968 Tripterygium wilfordii HOM05D005908 ORTHO05D007235 3.8e-96 355.5 288 63.5
CsaV3_3G016830 Cucumis sativus L. HOM05D005908 ORTHO05D007235 5.0e-96 355.1 289 62.6
FvH4_7g15530 Fragaria vesca HOM05D005908 ORTHO05D007235 5.0e-96 355.1 279 65.9
FAN06G2086 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.0e-96 355.1 279 65.9
FAN06G0652 Fragaria x ananassa HOM05D005908 ORTHO05D007235 8.5e-96 354.4 279 65.9
FAN10G2728 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.4e-95 353.6 279 65.6
Hma1.2p1_0270F.1_g108430 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 4.2e-95 352.1 245 69.8
Potri.015G138400 Populus trichocarpa HOM05D005908 ORTHO05D007235 4.2e-95 352.1 284 64.8
FAN03G0397 Fragaria x ananassa HOM05D005908 ORTHO05D007235 5.5e-95 351.7 278 64.4
Sed0015226 Sechium edule HOM05D005908 ORTHO05D007235 7.2e-95 351.3 290 62.1
FAN01G2408 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.2e-94 350.5 283 65.0
FAN10G3232 Fragaria x ananassa HOM05D005908 ORTHO05D007235 2.7e-94 349.4 279 64.9
Gohir.D09G040800 Gossypium hirsutum HOM05D005908 ORTHO05D007235 2.7e-94 349.4 278 64.7
Ciclev10005584m.g Citrus clementina HOM05D005908 ORTHO05D007235 3.6e-94 349.0 284 64.4
Gorai.006G046700 Gossypium raimondii HOM05D005908 ORTHO05D007235 7.9e-94 347.8 278 64.4
vmacro06719 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 1.0e-93 347.4 299 60.9
Nn6g34248 Nelumbo nucifera HOM05D005908 ORTHO05D007235 1.8e-93 346.7 255 65.5
Sabra15G0149500 Salix brachista HOM05D005908 ORTHO05D007235 1.5e-92 343.6 266 64.7
Thecc.03G170900 Theobroma cacao HOM05D005908 ORTHO05D007235 3.3e-92 342.4 281 63.7
DCAR_009351 Daucus carota HOM05D005908 ORTHO05D007235 1.3e-91 340.5 259 64.5
Rhsim04G0117700 Rhododendron simsii HOM05D005908 ORTHO05D007235 4.8e-91 338.6 345 53.9
VMungo0464G0636 Vigna mungo HOM05D005908 ORTHO05D007235 6.3e-91 338.2 273 62.6
Manes.06G144000 Manihot esculenta HOM05D005908 ORTHO05D007235 1.4e-90 337.0 288 60.8
CAN.G548.2 Capsicum annuum HOM05D005908 ORTHO05D007235 3.1e-90 335.9 282 59.9
COL.COLO4_14265 Corchorus olitorius HOM05D005908 ORTHO05D007235 5.3e-90 335.1 278 62.6
MBI12_g29759_MAGBIO Magnolia biondii HOM05D005908 ORTHO05D007235 2.0e-89 333.2 281 59.8
Oeu030124.1 Olea europaea HOM05D005908 ORTHO05D007235 4.5e-89 332.0 262 64.5
Eucgr.K00226 Eucalyptus grandis HOM05D005908 ORTHO05D007235 5.9e-89 331.6 269 62.8
PSO782G1770 Papaver somniferum HOM05D005908 ORTHO05D007235 7.7e-89 331.3 289 58.5
MSTRG.8762 Avicennia marina HOM05D005908 ORTHO05D007235 1.7e-88 330.1 283 58.3
Lsat_1_v5_gn_2_133120 Lactuca sativa HOM05D005908 ORTHO05D007235 1.7e-88 330.1 266 63.9
Cpa.g.sc107.9 Carica papaya HOM05D005908 ORTHO05D007235 2.9e-88 329.3 288 61.8
Glyma.16G198400 Glycine max HOM05D005908 ORTHO05D007235 2.9e-88 329.3 284 58.8
Sopen03g005070 Solanum pennellii HOM05D005908 ORTHO05D007235 2.9e-88 329.3 284 58.1
PGSC0003DMG402014313 Solanum tuberosum HOM05D005908 ORTHO05D007235 6.5e-88 328.2 284 58.8
Lalb_Chr01g0009141 Lupinus albus HOM05D005908 ORTHO05D007235 8.5e-88 327.8 287 57.8
Lj4g0016789 Lotus japonicus HOM05D005908 ORTHO05D007235 1.1e-87 327.4 267 61.0
Solyc03g026200.4 Solanum lycopersicum HOM05D005908 ORTHO05D007235 1.1e-87 327.4 284 57.7
Lj2g0007665 Lotus japonicus HOM05D005908 ORTHO05D007235 3.2e-87 325.9 267 61.0
Aqoxy7G00441 Aquilegia oxysepala HOM05D005908 ORTHO05D007235 1.2e-86 323.9 288 58.0
PSO478G3277 Papaver somniferum HOM05D005908 ORTHO05D007235 1.6e-86 323.6 289 57.4
Lj2g0024281 Lotus japonicus HOM05D005908 ORTHO05D007235 2.1e-86 323.2 270 60.7
arahy.Tifrunner.gnm1.ann1.580JC2 Arachis hypogaea HOM05D005908 ORTHO05D007235 3.6e-86 322.4 295 58.3
Migut.F00374 Erythranthe guttata HOM05D005908 ORTHO05D007235 3.6e-86 322.4 267 59.9
Psat1g113160 Pisum sativum HOM05D005908 ORTHO05D007235 3.6e-86 322.4 285 58.6
TPR.G5821 Trifolium pratense HOM05D005908 ORTHO05D007235 4.7e-86 322.0 278 58.3
arahy.Tifrunner.gnm1.ann1.K8NCYF Arachis hypogaea HOM05D005908 ORTHO05D007235 6.1e-86 321.6 293 58.7
Cc10_g10330 Coffea canephora HOM05D005908 ORTHO05D007235 7.9e-86 321.2 285 59.3
HanXRQChr07g0206851 Helianthus annuus HOM05D005908 ORTHO05D007235 6.7e-85 318.2 276 59.1
Prupe.1G077000 Prunus persica HOM05D005908 ORTHO05D007235 8.8e-85 317.8 284 59.9
SalBow1G0690 Salvia bowleyana HOM05D005908 ORTHO05D007235 8.8e-85 317.8 264 59.5
AL8G26480 Arabidopsis lyrata HOM05D005908 ORTHO05D007235 9.7e-84 314.3 267 59.2
ECA238G1518 Erigeron canadensis HOM05D005908 ORTHO05D007235 3.7e-83 312.4 263 60.8
Sp6g14360 Schrenkiella parvula HOM05D005908 ORTHO05D007235 6.3e-83 311.6 269 59.1
SpUn0060_0050 Schrenkiella parvula HOM05D005908 ORTHO05D007235 6.3e-83 311.6 269 59.1
THA.LOC104811995 Tarenaya hassleriana HOM05D005908 ORTHO05D007235 1.8e-82 310.1 241 64.3
SGA_v2.0_scaffold2G01076 Striga asiatica HOM05D005908 ORTHO05D007235 2.4e-82 309.7 318 53.1
CARHR265040 Cardamine hirsuta HOM05D005908 ORTHO05D007235 9.1e-82 307.8 262 60.7
Carub.0008s1219 Capsella rubella HOM05D005908 ORTHO05D007235 1.6e-81 307.0 269 58.4
AT5G52110 Arabidopsis thaliana HOM05D005908 ORTHO05D007235 2.6e-81 306.2 264 60.2
Aa31LG3G8480 Aethionema arabicum HOM05D005908 ORTHO05D007235 4.5e-81 305.4 268 57.8
BcaB01g04184 Brassica carinata HOM05D005908 ORTHO05D007235 1.7e-80 303.5 263 58.2
Thhalv10014339m.g Eutrema salsugineum HOM05D005908 ORTHO05D007235 5.0e-80 302.0 287 55.1
BcaC01g06164 Brassica carinata HOM05D005908 ORTHO05D007235 6.5e-80 301.6 266 56.4
C03p18500 Brassica napus HOM05D005908 ORTHO05D007235 6.5e-80 301.6 266 56.4
BolC3t14247H Brassica oleracea HOM05D005908 ORTHO05D007235 6.5e-80 301.6 266 56.4
Hma1.2p1_0270F.1_g108420 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 6.5e-80 301.6 295 55.3
BraA03t10874Z Brassica rapa HOM05D005908 ORTHO05D007235 8.5e-80 301.2 266 56.4
A03p15840 Brassica napus HOM05D005908 ORTHO05D007235 1.1e-79 300.8 266 56.4
Zm00001eb021390 Zea mays HOM05D005908 ORTHO05D007235 1.2e-76 290.8 285 51.6
Hund04705 Selenicereus undatus HOM05D005908 ORTHO05D007235 3.3e-76 289.3 273 55.3
Nitab4.5_0005024g0020 Nicotiana tabacum HOM05D005908 ORTHO05D007235 1.7e-75 287.0 281 53.7
Ah.13g068320 Amaranthus hybridus HOM05D005908 ORTHO05D007235 2.8e-75 286.2 258 55.4
AUR62016029 Chenopodium quinoa HOM05D005908 ORTHO05D007235 3.7e-75 285.8 264 53.4
Sc25g0000390 Simmondsia chinensis HOM05D005908 ORTHO05D007235 1.2e-73 280.8 262 54.2
Nitab4.5_0001083g0110 Nicotiana tabacum HOM05D005908 ORTHO05D007235 3.5e-73 279.3 302 51.0
Gohir.A09G040000 Gossypium hirsutum HOM05D005908 ORTHO05D007235 1.9e-71 273.5 221 66.1
Phvul.004G121600 Phaseolus vulgaris HOM05D005908 ORTHO05D007235 2.5e-71 273.1 197 67.0
HPP92_001363 Vanilla planifolia HOM05D005908 ORTHO05D007235 1.6e-70 270.4 241 55.2
ATR0757G107 Amborella trichopoda HOM05D005908 ORTHO05D007235 3.6e-70 269.2 233 56.2
CDE11G0458 Ceratophyllum demersum HOM05D003547 ORTHO05D004236 4.0e-69 265.8 236 52.1
AUR62021234 Chenopodium quinoa HOM05D005908 ORTHO05D007235 6.3e-67 258.5 226 55.3
vmacro06721 Vaccinium macrocarpon HOM05D005908 ORTHO05D007235 3.8e-64 249.2 266 52.3
MELO3C006877.2 Cucumis melo HOM05D005908 ORTHO05D007235 2.5e-63 246.5 262 51.9
Peaxi162Scf00915g00250 Petunia axillaris HOM05D005908 ORTHO05D007235 1.2e-62 244.2 292 49.3
EL10Ac3g05695 Beta vulgaris HOM05D005908 ORTHO05D007235 1.1e-58 231.1 202 55.9
HPP92_001354 Vanilla planifolia HOM05D005908 ORTHO05D007235 3.5e-49 199.5 241 45.2
unitig_37.g11958 Utricularia gibba HOM05D005908 ORTHO05D007235 4.6e-49 199.1 206 50.5
SEGI_20513 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 2.1e-46 190.3 245 43.7
Mapoly0051s0108 Marchantia polymorpha HOM05D005908 ORTHO05D007235 2.7e-41 173.3 241 39.4
Lsat_1_v5_gn_2_133160 Lactuca sativa HOM05D005908 ORTHO05D007235 5.2e-37 159.1 138 60.9
CSS0026196 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 3.7e-35 152.9 106 64.2
CSS0048064 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 3.7e-35 152.9 106 64.2
AagrBONN_evm.TU.Sc2ySwM_228.723 Anthoceros agrestis HOM05D005908 ORTHO05D007235 3.2e-34 149.8 242 35.5
Actinidia34081 Actinidia chinensis HOM05D005908 ORTHO05D007235 1.7e-32 144.1 145 54.5
FAN03G3234 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.5e-31 141.0 168 48.2
FAN03G2347 Fragaria x ananassa HOM05D005908 ORTHO05D007235 1.9e-31 140.6 168 48.8
Pp3c13_15400 Physcomitrium patens HOM05D005908 ORTHO05D007235 4.3e-31 139.4 248 32.3
CSS0007682 Camellia sinensis var. sinensis HOM05D005908 ORTHO05D007235 2.1e-30 137.1 94 74.5
SMO364G0827 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 2.2e-27 127.1 232 34.9
Dinv28477 Davidia involucrata HOM05D005908 ORTHO05D007235 4.9e-27 125.9 88 72.7
Cre12.g537850 Chlamydomonas reinhardtii HOM05D005908 ORTHO05D007235 7.1e-26 122.1 318 29.6
MCO01G567 Micromonas commoda HOM05D005908 ORTHO05D007235 4.7e-22 109.4 253 31.2
SEGI_01877 Sequoiadendron giganteum HOM05D005908 ORTHO05D007235 8.9e-21 105.1 124 47.6
SMO353G0077 Selaginella moellendorffii HOM05D005908 ORTHO05D007235 3.8e-19 99.8 233 31.3
MD16G1250200 Malus domestica HOM05D005908 ORTHO05D007235 1.4e-18 97.8 76 67.1
CBR_g58789 Chara braunii HOM05D005908 ORTHO05D007235 1.7e-16 90.9 139 42.4
FAN01G0300 Fragaria x ananassa HOM05D005908 ORTHO05D007235 3.9e-16 89.7 103 45.6
MELO3C031805.2 Cucumis melo HOM05D005908 ORTHO05D007235 3.3e-15 86.7 67 62.7
FvH4_7g29023 Fragaria vesca HOM05D005908 ORTHO05D007235 5.6e-15 85.9 65 66.2
Os10g0522500 Oryza sativa ssp. japonica HOM05D005908 ORTHO05D007235 1.4e-13 81.3 51 76.5
Hma1.2p1_0010F.1_g006900 Hydrangea macrophylla HOM05D005908 ORTHO05D007235 3.8e-11 73.2 60 58.3
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 2.4e-10 70.5 44 75.0


User provided reference genes

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