Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 4.2e-237 824.3 422 100.0
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 1.4e-211 739.6 421 87.6
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 3.5e-199 698.4 421 84.6
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 1.8e-195 686.0 421 82.7
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 8.9e-195 683.7 421 81.9
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 1.5e-194 682.9 421 81.0
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 3.4e-194 681.8 421 81.9
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 3.4e-194 681.8 419 82.3
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 1.7e-193 679.5 421 81.0
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 1.7e-193 679.5 454 79.1
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 2.9e-193 678.7 421 80.3
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 1.8e-192 676.0 421 80.8
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 7.0e-192 674.1 421 79.8
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 7.8e-191 670.6 421 80.5
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 2.3e-190 669.1 421 81.0
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 5.0e-190 667.9 421 79.3
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.5e-189 666.4 421 80.0
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 1.9e-189 666.0 421 79.8
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.9e-189 666.0 421 79.8
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 5.6e-189 664.5 421 79.3
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 5.6e-189 664.5 421 79.8
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 1.6e-188 662.9 421 78.4
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 6.2e-188 661.0 423 79.4
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 1.8e-187 659.4 418 78.0
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 3.1e-187 658.7 422 78.4
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 3.1e-187 658.7 421 77.4
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 8.9e-187 657.1 421 78.6
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 1.5e-186 656.4 421 77.9
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 3.4e-186 655.2 421 77.9
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 5.8e-186 654.4 421 77.4
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 7.5e-186 654.1 421 78.6
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.3e-185 653.3 421 76.7
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.3e-185 653.3 421 76.5
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 1.7e-185 652.9 421 77.7
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 2.9e-185 652.1 430 78.1
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 2.9e-185 652.1 421 77.4
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 3.7e-185 651.7 423 79.0
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 1.1e-184 650.2 422 78.2
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.0e-182 643.7 421 75.5
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 1.3e-182 643.3 421 77.4
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 3.0e-182 642.1 421 75.1
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 3.9e-182 641.7 421 75.1
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 8.6e-182 640.6 421 74.6
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 1.5e-181 639.8 421 77.0
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.9e-181 639.4 421 74.6
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 4.3e-181 638.3 418 76.1
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 4.3e-181 638.3 422 76.8
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.6e-180 636.3 421 75.5
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 3.6e-180 635.2 418 75.8
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 4.7e-180 634.8 418 75.8
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 1.8e-179 632.9 421 76.7
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 1.8e-179 632.9 423 76.6
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 3.1e-179 632.1 421 74.1
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 4.0e-179 631.7 421 76.0
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 4.0e-179 631.7 419 76.1
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 6.8e-179 630.9 421 75.3
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 1.5e-178 629.8 455 72.3
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 4.4e-178 628.2 422 75.6
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 2.9e-177 625.5 423 74.9
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 3.7e-177 625.2 419 74.5
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 2.4e-176 622.5 421 72.2
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 2.4e-176 622.5 428 73.8
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 5.4e-176 621.3 418 76.6
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 7.1e-176 620.9 423 76.1
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 3.5e-175 618.6 422 72.0
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 6.0e-175 617.8 402 76.6
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 6.6e-174 614.4 425 72.5
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 1.5e-173 613.2 418 73.9
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 2.1e-172 609.4 421 71.3
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 2.1e-172 609.4 460 68.9
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 2.8e-172 609.0 419 71.6
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 3.6e-172 608.6 421 72.9
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 4.7e-172 608.2 419 72.3
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 6.8e-171 604.4 422 72.5
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 2.2e-169 599.4 423 72.6
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 7.1e-168 594.3 421 69.8
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 4.7e-164 581.6 429 69.9
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 1.1e-163 580.5 421 68.6
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 3.1e-163 578.9 420 68.8
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 3.1e-163 578.9 421 70.3
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 6.9e-163 577.8 421 71.7
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 3.2e-160 568.9 419 71.6
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 4.2e-160 568.5 421 69.6
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 2.1e-159 566.2 421 68.6
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 4.6e-159 565.1 422 68.2
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 2.3e-158 562.8 422 68.7
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 2.3e-158 562.8 421 65.8
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 3.3e-157 558.9 422 68.0
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 2.8e-156 555.8 421 68.2
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 3.1e-155 552.4 383 73.6
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 1.2e-154 550.4 422 67.1
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 1.2e-154 550.4 422 67.1
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 2.0e-154 549.7 421 68.6
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 3.4e-154 548.9 422 66.4
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 5.8e-154 548.1 419 66.3
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 1.4e-152 543.5 423 66.2
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 1.4e-152 543.5 423 66.2
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 2.4e-152 542.7 423 66.2
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 2.4e-152 542.7 422 66.4
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 3.2e-152 542.3 421 67.2
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 2.1e-151 539.7 320 83.1
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 2.3e-150 536.2 422 66.4
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 3.9e-150 535.4 422 65.6
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 1.9e-149 533.1 415 63.4
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 7.4e-149 531.2 422 64.9
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 7.4e-149 531.2 309 85.4
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 7.4e-149 531.2 432 65.3
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 1.6e-148 530.0 422 65.2
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 1.6e-148 530.0 422 65.2
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 4.8e-148 528.5 422 64.5
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 8.1e-148 527.7 424 63.9
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 1.8e-147 526.6 422 64.9
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 2.4e-147 526.2 422 64.0
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 9.0e-147 524.2 425 63.3
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 4.5e-146 521.9 418 64.4
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 1.7e-145 520.0 422 63.7
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 7.9e-143 511.1 422 62.1
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 3.0e-142 509.2 387 67.4
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 1.3e-140 503.8 383 67.1
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 1.4e-139 500.4 443 61.4
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 1.3e-137 493.8 359 68.2
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 1.8e-131 473.4 424 55.9
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 8.5e-129 464.5 385 64.7
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 3.2e-128 462.6 427 53.4
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 1.4e-126 457.2 427 54.6
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 1.1e-125 454.1 451 53.4
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 1.6e-119 433.7 400 59.8
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 8.5e-113 411.4 430 50.9
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 3.2e-112 409.5 237 85.7
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 9.4e-112 407.9 238 86.1
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 2.2e-108 396.7 284 69.0
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 1.2e-103 380.9 425 54.4
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 1.8e-99 367.1 351 57.0
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 4.1e-99 365.9 336 58.9
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 2.9e-97 359.8 352 56.2
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 5.0e-73 279.3 214 67.8
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 5.6e-72 275.8 430 37.9
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 4.1e-67 259.6 322 48.1
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 4.0e-62 243.0 190 66.8
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 4.0e-62 243.0 341 40.2
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 6.6e-57 225.7 190 63.2
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 1.5e-56 224.6 358 41.9
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 9.2e-51 205.3 190 57.9
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 2.1e-50 204.1 305 43.0
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 7.6e-45 185.7 251 47.4
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 9.9e-45 185.3 140 63.6
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 2.2e-36 157.5 313 33.2
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.1e-32 145.2 150 54.7
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 3.1e-30 137.1 101 70.3
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.2e-29 135.2 119 58.8
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 9.3e-27 125.6 78 75.6
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 9.3e-27 125.6 78 75.6
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 4.3e-24 116.7 76 72.4
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 1.1e-22 112.1 124 49.2
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 2.4e-14 84.3 73 60.3
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 3.1e-14 84.0 57 71.9
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 3.8e-12 77.0 62 64.5
FvH4_2g01181 Fragaria vesca HOM05D000564 ORTHO05D005446 2.5e-11 74.3 53 75.5
ECA232G4246 Erigeron canadensis HOM05D004649 ORTHO05D005446 7.2e-11 72.8 53 64.2
FAN14G5770 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.5e-08 65.1 133 35.3
EL10As11g23980 Beta vulgaris HOM05D004649 ORTHO05D005446 2.0e-08 64.7 37 73.0
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 4.3e-08 63.5 49 61.2
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 4.3e-08 63.5 49 61.2
FvH4_6g52500 Fragaria vesca HOM05D004649 ORTHO05D005446 9.7e-08 62.4 48 60.4
Nn4g22394 Nelumbo nucifera HOM05D004649 ORTHO05D005446 3.7e-07 60.5 49 61.2
CARHR069530 Cardamine hirsuta HOM05D002716 ORTHO05D003324 6.3e-07 59.7 194 28.4
AL2G36010 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 8.2e-07 59.3 194 28.9
AT1G75990 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 1.4e-06 58.5 193 26.4
Thhalv10007479m.g Eutrema salsugineum HOM05D002716 ORTHO05D003324 1.4e-06 58.5 193 25.9
Carub.0002s2288 Capsella rubella HOM05D002716 ORTHO05D003324 1.8e-06 58.2 194 28.4
Carub.0001s1973 Capsella rubella HOM05D002716 ORTHO05D003324 2.4e-06 57.8 193 25.9
Sp1g17970 Schrenkiella parvula HOM05D002716 ORTHO05D003324 2.4e-06 57.8 193 25.9
AT1G20200 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 3.1e-06 57.4 193 25.9
CARHR020700 Cardamine hirsuta HOM05D002716 ORTHO05D003324 3.1e-06 57.4 193 25.9
AL1G33040 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 4.1e-06 57.0 193 25.9
BcaB03g12876 Brassica carinata HOM05D002716 ORTHO05D003324 4.1e-06 57.0 193 25.9
BcaC08g47308 Brassica carinata HOM05D002716 ORTHO05D003324 4.1e-06 57.0 202 26.2
A07p41500 Brassica napus HOM05D002716 ORTHO05D003324 4.1e-06 57.0 202 26.2
C06p49910 Brassica napus HOM05D002716 ORTHO05D003324 4.1e-06 57.0 202 26.2
BolC6t40029H Brassica oleracea HOM05D002716 ORTHO05D003324 4.1e-06 57.0 202 26.2
BraA07t31682Z Brassica rapa HOM05D002716 ORTHO05D003324 4.1e-06 57.0 202 26.2
Sp5g31110 Schrenkiella parvula HOM05D002716 ORTHO05D003324 4.1e-06 57.0 202 25.7
Ah.00g000740 Amaranthus hybridus HOM05D002716 ORTHO05D003324 5.3e-06 56.6 134 26.1


User provided reference genes

Program Settings