Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G243900 Carya illinoinensis HOM05D003776 ORTHO05D004459 1.5e-122 443.0 233 100.0
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 4.4e-111 404.8 230 91.7
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 7.5e-111 404.1 230 91.3
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 5.0e-107 391.3 230 87.8
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 8.6e-107 390.6 230 88.3
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 2.5e-106 389.0 230 88.7
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 2.5e-106 389.0 230 87.8
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 1.6e-105 386.3 230 87.8
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 5.2e-104 381.3 227 85.5
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 6.8e-104 380.9 230 85.2
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 2.6e-103 379.0 230 85.7
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 3.4e-103 378.6 230 85.7
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 5.7e-103 377.9 227 85.5
Actinidia26393 Actinidia chinensis HOM05D003776 ORTHO05D004459 9.8e-103 377.1 230 84.8
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 2.2e-102 375.9 230 84.3
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 4.9e-102 374.8 228 84.6
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.9e-102 374.8 228 84.6
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 8.3e-102 374.0 228 84.6
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 8.3e-102 374.0 231 85.3
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 1.4e-101 373.2 228 84.6
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 1.4e-101 373.2 230 81.7
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 1.8e-101 372.9 228 84.6
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 4.1e-101 371.7 230 81.7
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 1.2e-100 370.2 228 84.2
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 1.6e-100 369.8 229 81.7
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 1.6e-100 369.8 230 82.2
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 7.8e-100 367.5 229 82.1
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 1.0e-99 367.1 230 82.6
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 1.3e-99 366.7 230 82.2
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 2.3e-99 365.9 230 80.0
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 3.9e-99 365.2 230 81.7
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 5.0e-99 364.8 230 81.7
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 5.0e-99 364.8 230 81.3
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 5.0e-99 364.8 247 77.7
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 6.6e-99 364.4 229 81.7
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 6.6e-99 364.4 231 80.5
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.1e-98 363.6 230 80.4
Lalb_Chr08g0234831 Lupinus albus HOM05D003776 ORTHO05D004459 1.9e-98 362.8 230 80.9
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 3.3e-98 362.1 230 80.4
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 3.3e-98 362.1 230 80.4
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 5.6e-98 361.3 230 80.4
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 5.6e-98 361.3 230 80.9
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 5.6e-98 361.3 230 80.4
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 9.5e-98 360.5 230 80.9
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 1.6e-97 359.8 230 80.4
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea HOM05D003776 ORTHO05D004459 4.7e-97 358.2 230 80.0
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 4.7e-97 358.2 229 79.5
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 1.4e-96 356.7 243 79.4
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 2.3e-96 355.9 230 80.9
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 8.9e-96 354.0 230 79.6
COL.COLO4_35084 Corchorus olitorius HOM05D003776 ORTHO05D004459 2.0e-95 352.8 230 81.3
Oeu055885.1 Olea europaea HOM05D003776 ORTHO05D004459 2.6e-95 352.4 226 78.8
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 2.6e-95 352.4 228 79.4
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 3.4e-95 352.1 230 77.0
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 4.4e-95 351.7 230 79.1
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 5.8e-95 351.3 230 79.6
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 2.4e-93 345.9 228 76.3
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 5.4e-93 344.7 230 77.0
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 5.4e-93 344.7 230 78.3
CDE02G1439 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 7.0e-93 344.4 230 76.1
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 9.2e-93 344.0 232 76.3
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 2.3e-91 339.3 228 75.4
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 5.0e-91 338.2 228 76.3
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 4.3e-90 335.1 228 75.4
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 4.3e-90 335.1 228 75.4
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 7.3e-90 334.3 228 75.9
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 9.5e-90 334.0 228 75.0
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 2.1e-89 332.8 228 74.1
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 2.8e-89 332.4 228 75.4
Ah.09g226230 Amaranthus hybridus HOM05D003776 ORTHO05D004459 3.6e-89 332.0 230 72.6
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 3.6e-89 332.0 240 75.4
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 6.2e-89 331.3 228 74.6
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 6.2e-89 331.3 228 74.6
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 6.2e-89 331.3 228 73.7
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 1.4e-88 330.1 228 74.1
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 8.9e-88 327.4 228 73.7
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 1.7e-86 323.2 228 73.7
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 1.7e-86 323.2 228 72.8
HPP92_008649 Vanilla planifolia HOM05D003776 ORTHO05D004459 5.4e-85 318.2 230 69.6
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 2.7e-84 315.8 228 72.8
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 2.3e-83 312.8 228 70.2
ATR0322G072 Amborella trichopoda HOM05D003776 ORTHO05D004459 5.1e-83 311.6 228 70.6
QL02p088302 Quercus lobata HOM05D003776 ORTHO05D004459 3.4e-79 298.9 176 88.1
Os02g0202300 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 5.4e-77 291.6 221 66.1
unitig_26.g8982 Utricularia gibba HOM05D003776 ORTHO05D004459 3.9e-75 285.4 236 63.6
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 6.6e-75 284.6 230 67.4
Cpa.g.c32453 Carica papaya HOM05D003776 ORTHO05D004459 3.5e-68 262.3 152 88.2
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 3.9e-67 258.8 228 57.9
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 8.7e-67 257.7 228 60.1
SEGI_08250 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 2.8e-65 252.7 183 69.4
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 6.9e-64 248.1 237 57.8
SHI03382 Sapria himalayana HOM05D003776 ORTHO05D004459 5.8e-63 245.0 216 64.8
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 1.6e-57 226.9 232 55.2
HanXRQChr04g0119281 Helianthus annuus HOM05D003776 ORTHO05D004459 4.9e-54 215.3 183 65.6
HanXRQChr12g0373951 Helianthus annuus HOM05D003776 ORTHO05D004459 6.4e-54 214.9 184 64.7
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 3.0e-51 206.1 226 46.0
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 3.0e-43 179.5 152 64.5
FvH4_6g38790 Fragaria vesca HOM05D003776 ORTHO05D004459 5.3e-40 168.7 226 46.0
Pp3c20_13260 Physcomitrium patens HOM05D003776 ORTHO05D004459 1.7e-33 147.1 228 39.9
Pp3c23_3420 Physcomitrium patens HOM05D003776 ORTHO05D004459 4.5e-31 139.0 224 38.8
RcHm_v2.0_Chr2g0152391 Rosa chinensis HOM05D003776 ORTHO05D004459 3.8e-30 136.0 230 38.7
RcHm_v2.0_Chr2g0152361 Rosa chinensis HOM05D003776 ORTHO05D004459 1.1e-29 134.4 227 38.8
Cpa.g.sc75.37 Carica papaya HOM05D003776 ORTHO05D004459 2.8e-25 119.8 81 77.8
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 2.9e-22 109.8 55 98.2
HPP92_008668 Vanilla planifolia HOM05D003776 ORTHO05D004459 4.1e-16 89.4 105 46.7
PRCOL_00003394 Prasinoderma coloniale HOM05D003776 ORTHO05D004459 9.7e-10 68.2 233 27.0


User provided reference genes

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