Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 9.5e-181 636.7 324 100.0
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 2.7e-135 485.7 322 77.6
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 6.3e-132 474.6 323 75.2
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 2.4e-131 472.6 323 74.9
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 3.1e-131 472.2 322 75.5
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 2.4e-107 392.9 331 63.4
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 1.0e-105 387.5 324 62.0
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 2.9e-105 386.0 324 61.7
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.1e-104 384.0 329 62.6
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 2.5e-104 382.9 322 65.2
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 5.5e-104 381.7 324 61.7
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 7.2e-104 381.3 331 63.1
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 1.2e-103 380.6 322 64.0
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 1.0e-102 377.5 323 63.8
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 1.0e-102 377.5 335 60.3
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 4.0e-102 375.6 330 63.0
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 5.2e-102 375.2 335 62.7
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 5.2e-102 375.2 322 64.0
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 2.0e-101 373.2 327 63.6
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 3.4e-101 372.5 330 61.8
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 1.7e-100 370.2 326 61.0
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 1.4e-99 367.1 325 60.6
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 3.1e-99 365.9 326 60.4
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 7.0e-99 364.8 327 61.2
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.6e-98 363.6 326 60.1
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 2.0e-98 363.2 324 61.1
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 2.0e-98 363.2 324 60.8
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 5.9e-98 361.7 331 60.4
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 6.6e-97 358.2 324 60.2
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 1.2e-95 354.0 325 60.3
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 2.1e-95 353.2 324 60.2
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 8.0e-95 351.3 326 59.8
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 3.0e-94 349.4 325 60.0
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 3.0e-94 349.4 328 58.5
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 1.5e-93 347.1 329 55.9
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 2.0e-93 346.7 326 60.1
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 2.0e-93 346.7 322 58.7
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 4.4e-93 345.5 326 58.6
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 2.2e-92 343.2 326 59.2
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 3.7e-92 342.4 330 58.5
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 6.3e-92 341.7 371 54.2
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 1.1e-91 340.9 324 57.1
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 1.4e-91 340.5 323 57.6
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 3.2e-91 339.3 324 59.0
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.2e-91 339.3 324 59.0
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 3.2e-91 339.3 328 55.8
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 3.2e-91 339.3 328 55.8
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.7e-90 336.3 324 58.3
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 7.8e-90 334.7 324 56.5
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 7.8e-90 334.7 324 59.0
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 1.0e-89 334.3 323 55.4
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 3.9e-89 332.4 331 56.5
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 6.6e-89 331.6 324 57.1
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 8.6e-89 331.3 336 57.1
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 8.6e-89 331.3 336 57.4
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 1.5e-88 330.5 324 55.9
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 1.9e-88 330.1 329 54.7
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 3.3e-88 329.3 327 55.0
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 4.3e-88 328.9 318 57.9
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 1.2e-87 327.4 327 55.7
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 2.1e-87 326.6 327 54.4
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 1.4e-86 323.9 327 54.4
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 4.0e-86 322.4 321 56.7
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 4.4e-85 318.9 327 53.8
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 9.8e-85 317.8 327 56.6
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 4.9e-84 315.5 327 52.9
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 8.3e-84 314.7 333 54.1
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.1e-83 314.3 336 53.6
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 9.2e-83 311.2 323 52.6
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 8.6e-81 304.7 338 52.7
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 1.1e-80 304.3 333 55.6
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 2.5e-80 303.1 322 51.9
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 5.6e-80 302.0 325 53.2
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 1.2e-79 300.8 332 53.3
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 2.8e-79 299.7 327 53.2
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 4.7e-79 298.9 326 53.1
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 6.2e-79 298.5 302 58.6
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 5.2e-78 295.4 324 53.4
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 4.4e-77 292.4 324 50.9
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 1.3e-76 290.8 326 54.9
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 7.1e-75 285.0 324 50.6
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 9.2e-75 284.6 273 56.4
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 4.6e-74 282.3 323 52.9
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 1.9e-72 276.9 325 52.0
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 1.9e-72 276.9 325 52.0
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 3.3e-72 276.2 324 50.9
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 4.3e-72 275.8 326 52.1
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 1.2e-71 274.2 327 51.7
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 6.2e-71 271.9 331 49.5
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 8.1e-71 271.6 325 49.8
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.4e-70 270.8 324 49.4
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 1.8e-70 270.4 328 47.3
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 6.8e-70 268.5 341 48.4
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 5.8e-69 265.4 322 48.1
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 9.9e-69 264.6 339 48.1
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 8.3e-68 261.5 161 77.6
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.9e-67 260.4 333 46.8
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 2.4e-67 260.0 323 48.0
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.2e-63 247.7 325 46.5
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 2.1e-63 246.9 325 45.8
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 1.8e-62 243.8 411 42.3
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 1.1e-56 224.6 330 42.1
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 4.3e-56 222.6 323 42.7
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 2.0e-45 187.2 329 36.2
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 4.2e-43 179.5 320 39.7
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 1.1e-40 171.4 165 56.4
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 5.3e-38 162.5 266 38.7
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 1.0e-36 158.3 323 37.2
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 1.3e-36 157.9 266 44.4
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 8.4e-36 155.2 311 37.6
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 8.4e-36 155.2 337 35.9
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 1.3e-31 141.4 322 33.5
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 6.9e-30 135.6 320 34.7
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 3.8e-28 129.8 138 46.4
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.1e-27 128.3 358 29.6
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 2.5e-27 127.1 129 47.3
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 8.2e-23 112.1 236 36.0
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 3.1e-22 110.2 136 42.6
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 3.4e-21 106.7 236 35.2
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 1.0e-20 105.1 57 75.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 1.3e-20 104.8 57 75.4
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 5.5e-19 99.4 196 39.3
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 2.7e-18 97.1 160 41.9
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 7.2e-11 72.4 112 42.0
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 4.8e-07 59.7 38 71.1
GSVIVG01008148001 Vitis vinifera HOM05D006355 ORTHO05D000948 6.3e-07 59.3 92 41.3


User provided reference genes

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