Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.5e-140 503.4 388 100.0
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 2.2e-22 110.9 180 47.8
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 8.6e-19 99.0 150 44.0
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 3.3e-18 97.1 168 44.6
TWI59G0499 Tripterygium wilfordii HOM05D012920 ORTHO05D012188 1.4e-16 91.7 131 49.6
Ciclev10014817m.g Citrus clementina HOM05D008991 ORTHO05D010442 2.0e-15 87.8 126 46.0
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 3.4e-15 87.0 451 41.7
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 1.3e-14 85.1 209 38.3
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 2.2e-14 84.3 431 43.6
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 4.9e-14 83.2 475 37.5
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 6.4e-14 82.8 240 35.0
Manes.13G139000 Manihot esculenta HOM05D012920 ORTHO05D012188 1.6e-12 78.2 160 40.0
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 2.7e-12 77.4 180 38.3
Atru.chr6.2817 Acer truncatum HOM05D015016 ORTHO05D016410 3.5e-12 77.0 178 35.4
ClCG02G017970 Citrullus lanatus HOM05D024384 ORTHO05D010442 7.8e-12 75.9 408 46.8
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 1.3e-11 75.1 435 42.8
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 5.0e-11 73.2 172 40.1
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 5.0e-11 73.2 194 40.2
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 1.5e-10 71.6 150 42.7
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 1.9e-10 71.2 178 37.6
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 3.3e-10 70.5 189 38.1
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 4.3e-10 70.1 160 39.4
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 4.3e-10 70.1 160 39.4
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 4.3e-10 70.1 194 36.6
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 7.3e-10 69.3 149 38.3
Eucgr.K01100 Eucalyptus grandis HOM05D020995 ORTHO05D010442 7.3e-10 69.3 94 47.9
Nitab4.5_0008704g0010 Nicotiana tabacum HOM05D011296 ORTHO05D013264 7.3e-10 69.3 129 45.0
MELO3C019755.2 Cucumis melo HOM05D024384 ORTHO05D010442 1.2e-09 68.6 407 43.0
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 1.6e-09 68.2 161 42.9
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 2.8e-09 67.4 154 38.3
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 3.6e-09 67.0 203 36.0
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 4.7e-09 66.6 161 39.1
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 6.2e-09 66.2 147 41.5
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 6.2e-09 66.2 122 37.7
Ca_01464_v3 Cicer arietinum L. HOM05D012920 ORTHO05D012188 6.2e-09 66.2 137 38.7
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 1.1e-08 65.5 161 41.6
CsaV3_6G018720 Cucumis sativus L. HOM05D024384 ORTHO05D010442 2.3e-08 64.3 403 40.2
Gohir.D11G064300 Gossypium hirsutum HOM05D020995 ORTHO05D010442 2.3e-08 64.3 53 67.9
Lj3g0021605 Lotus japonicus HOM05D012920 ORTHO05D012188 2.3e-08 64.3 85 44.7
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 2.3e-08 64.3 158 38.6
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 3.1e-08 63.9 159 38.4
Nitab4.5_0014887g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 4.0e-08 63.5 249 33.3
PGSC0003DMG400019976 Solanum tuberosum HOM05D011296 ORTHO05D013264 5.2e-08 63.2 167 38.3
CANSAT64G0119 Cannabis sativa HOM05D008991 ORTHO05D010442 6.8e-08 62.8 454 37.9
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 8.9e-08 62.4 161 37.3
Eucgr.A01897 Eucalyptus grandis HOM05D024384 ORTHO05D010442 1.2e-07 62.0 119 37.0
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 1.5e-07 61.6 162 36.4
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 2.0e-07 61.2 198 37.4
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 4.4e-07 60.1 150 39.3
EL10Ac9g20880 Beta vulgaris HOM05D024247 ORTHO05D019537 9.8e-07 58.9 96 50.0
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 9.8e-07 58.9 149 39.6
VMungo1127G0688 Vigna mungo HOM05D012920 ORTHO05D012188 1.3e-06 58.5 393 32.8
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 1.7e-06 58.2 185 36.2
Phvul.011G135600 Phaseolus vulgaris HOM05D012920 ORTHO05D012188 2.2e-06 57.8 335 26.6
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 3.7e-06 57.0 437 36.4
Gorai.007G069500 Gossypium raimondii HOM05D020995 ORTHO05D010442 6.4e-06 56.2 249 30.1


User provided reference genes

Program Settings