Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 2.1e-70 268.9 132 100.0
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 2.9e-51 205.3 127 82.7
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 2.4e-50 202.2 160 67.5
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 7.9e-49 197.2 131 75.6
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 8.7e-48 193.7 133 70.7
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 4.3e-47 191.4 130 72.3
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.3e-46 189.9 133 71.4
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 2.4e-45 185.7 132 75.0
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 2.6e-44 182.2 147 65.3
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 4.5e-44 181.4 144 66.0
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 5.8e-44 181.0 131 69.5
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 1.3e-43 179.9 133 68.4
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 1.3e-43 179.9 130 70.0
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 2.9e-43 178.7 128 70.3
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 3.8e-43 178.3 163 62.6
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 8.4e-43 177.2 133 66.9
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 2.5e-42 175.6 133 66.2
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 1.3e-40 169.9 133 63.9
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 1.8e-40 169.5 147 61.9
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 8.7e-40 167.2 127 66.1
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 1.1e-39 166.8 163 55.8
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 1.9e-39 166.0 148 57.4
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 4.3e-39 164.9 130 63.1
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 4.3e-39 164.9 147 56.5
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 5.7e-39 164.5 146 59.6
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 1.3e-38 163.3 131 61.1
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 1.6e-38 162.9 134 63.4
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 2.2e-38 162.5 150 56.0
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 2.2e-38 162.5 150 56.0
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 3.7e-38 161.8 131 61.1
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 3.7e-38 161.8 146 58.2
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 4.8e-38 161.4 131 60.3
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 6.3e-38 161.0 130 63.1
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 1.4e-37 159.8 131 63.4
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 1.4e-37 159.8 134 59.7
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 1.8e-37 159.5 173 49.7
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 6.9e-37 157.5 134 62.7
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 1.5e-36 156.4 131 62.6
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 1.5e-36 156.4 126 62.7
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 3.4e-36 155.2 132 62.1
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 4.5e-36 154.8 131 55.7
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 7.6e-36 154.1 159 52.8
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 1.3e-35 153.3 130 59.2
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.7e-35 152.9 136 56.6
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 2.2e-35 152.5 132 62.1
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 2.2e-35 152.5 138 53.6
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 8.5e-35 150.6 134 56.0
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 1.1e-34 150.2 168 48.2
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.4e-34 149.8 136 54.4
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 1.9e-34 149.4 130 56.2
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 4.6e-33 144.8 138 55.1
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 4.6e-33 144.8 157 51.6
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 7.9e-33 144.1 138 51.4
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 1.0e-32 143.7 170 46.5
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 1.8e-32 142.9 142 53.5
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 3.0e-32 142.1 171 47.4
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 6.7e-32 141.0 129 55.0
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 3.3e-31 138.7 152 51.3
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 7.4e-31 137.5 93 74.2
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 7.4e-31 137.5 93 74.2
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 9.7e-31 137.1 166 46.4
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 1.7e-30 136.3 152 49.3
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 1.7e-30 136.3 152 50.7
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 2.8e-30 135.6 158 50.0
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 8.2e-30 134.0 159 48.4
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 1.1e-29 133.7 133 53.4
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 1.8e-29 132.9 169 47.3
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 2.4e-29 132.5 133 54.1
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 9.1e-29 130.6 140 48.6
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 9.1e-29 130.6 123 52.0
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 5.0e-27 124.8 159 47.2
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 8.5e-27 124.0 151 45.0
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 1.1e-26 123.6 142 49.3
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.1e-25 119.4 134 45.5
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 3.6e-25 118.6 196 38.3
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 1.0e-24 117.1 130 49.2
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 1.4e-24 116.7 100 62.0
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 1.8e-24 116.3 188 42.0
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 2.3e-24 115.9 132 47.0
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 3.9e-24 115.2 163 43.6
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 3.9e-24 115.2 166 42.8
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 9.7e-23 110.5 78 70.5
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 3.7e-22 108.6 163 41.7
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 4.8e-22 108.2 136 42.6
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 6.3e-22 107.8 130 45.4
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 8.2e-22 107.5 131 45.0
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 1.2e-20 103.6 198 36.9
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 1.2e-20 103.6 143 43.4
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 4.5e-20 101.7 133 42.9
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 5.9e-20 101.3 163 39.3
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.7e-19 99.8 130 45.4
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 2.2e-19 99.4 198 36.4
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 2.2e-19 99.4 124 46.0
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 8.5e-19 97.4 131 41.2
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 1.4e-18 96.7 107 50.5
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 1.9e-18 96.3 119 47.9
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 4.2e-18 95.1 195 35.9
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 6.1e-17 91.3 155 38.1
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 1.8e-16 89.7 50 76.0
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 5.2e-16 88.2 121 47.9
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 6.7e-16 87.8 96 51.0
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 3.3e-15 85.5 115 48.7
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 2.2e-14 82.8 98 45.9
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 8.2e-14 80.9 104 46.2
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 8.2e-14 80.9 130 38.5
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.1e-13 79.0 90 51.1
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 3.1e-13 79.0 106 43.4
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 9.1e-13 77.4 117 42.7
Gohir.A05G416601 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.5e-12 75.5 90 50.0
Gohir.A05G417001 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.5e-12 75.5 90 50.0
Gorai.012G000200 Gossypium raimondii HOM05D006778 ORTHO05D008341 3.5e-12 75.5 90 50.0
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 3.5e-12 75.5 95 47.4
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 2.9e-11 72.4 71 54.9
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 1.9e-10 69.7 54 64.8
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 8.8e-08 60.8 61 59.0
BraA03t14903Z Brassica rapa HOM05D006778 ORTHO05D008341 9.7e-07 57.4 115 36.5
Zm00001eb021220 Zea mays HOM05D002505 ORTHO05D007115 8.2e-06 54.3 97 34.0
Zm00001eb044440 Zea mays HOM05D002505 ORTHO05D007115 8.2e-06 54.3 97 34.0


User provided reference genes

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