Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.4e-259 897.9 483 100.0
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.1e-244 848.2 492 94.1
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.0e-218 763.5 487 87.9
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 2.5e-209 732.3 480 77.5
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 5.4e-196 688.0 480 72.1
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 7.8e-195 684.1 481 72.6
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 1.0e-194 683.7 481 72.6
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 2.3e-194 682.6 480 72.3
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 6.6e-194 681.0 481 71.3
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 1.1e-193 680.2 521 67.6
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 1.5e-193 679.9 477 72.5
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 1.9e-193 679.5 480 72.1
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 1.2e-192 676.8 481 71.7
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 2.1e-192 676.0 480 71.0
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 8.0e-192 674.1 477 72.1
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 1.1e-191 673.7 480 76.9
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 1.1e-191 673.7 480 73.1
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 1.8e-191 672.9 480 74.2
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 6.8e-191 671.0 488 69.5
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 5.8e-190 667.9 480 70.0
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 7.5e-190 667.5 480 73.3
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 2.9e-189 665.6 480 75.6
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 6.4e-189 664.5 481 70.7
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 1.4e-188 663.3 480 70.6
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 2.4e-188 662.5 481 70.7
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 5.4e-188 661.4 480 69.2
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 1.2e-187 660.2 475 69.9
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 1.5e-185 653.3 503 69.6
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 2.0e-182 642.9 480 73.5
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 3.4e-182 642.1 480 74.8
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 4.9e-181 638.3 471 68.8
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 3.2e-180 635.6 480 67.9
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 2.7e-179 632.5 472 67.8
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 1.7e-178 629.8 480 65.8
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 1.5e-177 626.7 446 71.3
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 1.9e-177 626.3 470 67.7
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 1.2e-176 623.6 480 63.8
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 1.6e-176 623.2 473 66.0
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 1.1e-175 620.5 488 64.3
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 3.1e-175 619.0 498 64.7
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 3.1e-175 619.0 472 65.0
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 3.4e-174 615.5 474 72.6
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 9.9e-174 614.0 481 64.9
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 9.9e-174 614.0 470 66.2
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 1.7e-173 613.2 480 63.3
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 8.4e-173 610.9 473 68.9
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 8.4e-173 610.9 470 66.0
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 1.1e-172 610.5 470 70.0
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 9.2e-172 607.4 488 63.7
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 1.0e-170 604.0 473 67.9
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 1.0e-170 604.0 473 63.6
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 1.7e-170 603.2 470 70.2
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 9.6e-169 597.4 470 69.6
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 1.2e-168 597.0 470 70.4
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.4e-167 593.6 478 64.0
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 3.1e-167 592.4 471 65.2
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 6.9e-167 591.3 479 62.8
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 6.9e-167 591.3 479 63.9
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 2.0e-166 589.7 473 68.3
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 4.4e-166 588.6 474 63.7
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 2.9e-165 585.9 480 62.7
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 2.4e-164 582.8 480 62.9
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 5.4e-164 581.6 486 61.1
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 2.1e-163 579.7 475 61.3
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 2.1e-163 579.7 477 61.8
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 3.0e-162 575.9 482 60.6
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 5.1e-162 575.1 470 67.9
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 5.1e-162 575.1 478 60.9
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 5.1e-162 575.1 479 61.2
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 8.7e-162 574.3 482 60.8
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 1.1e-161 573.9 480 63.1
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 3.6e-160 568.9 471 61.8
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 3.6e-160 568.9 475 61.3
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 1.8e-159 566.6 470 61.7
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 5.3e-159 565.1 471 60.9
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 4.5e-158 562.0 479 60.1
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 7.6e-158 561.2 471 60.1
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 9.9e-158 560.8 471 60.1
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.3e-157 560.5 479 60.1
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 4.9e-157 558.5 471 59.9
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 4.9e-157 558.5 479 59.9
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 6.4e-157 558.1 472 60.6
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 6.4e-157 558.1 479 59.9
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 1.1e-156 557.4 471 59.9
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 1.1e-156 557.4 471 59.9
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 1.1e-156 557.4 471 59.9
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 1.1e-156 557.4 480 60.4
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 4.2e-156 555.4 471 66.0
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 5.4e-156 555.1 472 59.1
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 5.4e-156 555.1 472 59.7
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 5.4e-156 555.1 479 59.5
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 3.5e-155 552.4 470 64.9
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 2.3e-154 549.7 480 64.4
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 4.3e-153 545.4 480 58.1
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 5.3e-151 538.5 481 63.4
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 5.3e-151 538.5 480 66.5
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 2.0e-150 536.6 497 63.4
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 2.9e-149 532.7 480 57.5
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 4.2e-148 528.9 477 66.5
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 9.6e-145 517.7 479 56.6
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 1.8e-143 513.5 359 73.8
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.2e-132 475.7 480 49.8
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 6.3e-120 435.3 368 68.2
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 1.1e-119 434.5 387 59.7
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 9.4e-116 421.4 359 60.4
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.5e-102 375.9 417 47.0
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 3.8e-101 372.9 317 60.6
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 3.6e-91 339.7 483 41.2
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 1.3e-88 331.3 481 39.1
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 9.2e-87 325.1 475 40.0
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 4.0e-82 309.7 439 41.2
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.3e-74 283.9 185 75.7
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.4e-71 273.9 326 44.2
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.4e-63 248.1 352 43.2
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 4.8e-51 206.5 358 33.0
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 2.5e-31 141.0 483 31.7
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 9.6e-28 129.0 121 58.7
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 2.1e-27 127.9 311 30.9
vmacro12843 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 1.2e-22 112.1 67 77.6
TAR376G0117 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.3e-21 108.6 152 44.1
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 3.0e-21 107.5 383 26.4
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 1.1e-20 105.5 82 62.2
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.4e-15 85.9 63 58.7
SEGI_13008 Sequoiadendron giganteum HOM05D005030 ORTHO05D050943 6.7e-13 79.7 64 53.1
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 1.0e-08 65.9 33 90.9
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 4.2e-07 60.5 32 81.2
TAR625G0866 Trochodendron aralioides HOM05D005030 ORTHO05D006490 9.4e-07 59.3 45 62.2
MBI17_g19044_MAGBIO Magnolia biondii HOM05D000853 ORTHO05D011152 7.9e-06 56.2 37 67.6


User provided reference genes

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