Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 1.1e-215 753.1 375 100.0
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 5.5e-140 501.5 386 69.7
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 4.7e-139 498.4 386 69.2
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 6.1e-139 498.0 376 70.2
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 1.4e-138 496.9 331 78.2
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 5.7e-137 491.5 379 70.2
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 1.6e-134 483.4 381 68.5
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 2.0e-134 483.0 379 69.9
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 1.3e-133 480.3 389 67.4
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 5.0e-133 478.4 378 69.0
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 9.5e-132 474.2 376 68.4
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 3.6e-131 472.2 365 70.1
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 6.1e-131 471.5 377 67.6
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 2.0e-129 466.5 372 68.5
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 4.4e-129 465.3 369 67.5
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 1.3e-128 463.8 385 66.8
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 2.2e-128 463.0 372 68.3
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 6.4e-128 461.5 369 66.9
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 1.1e-127 460.7 378 67.5
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 5.4e-127 458.4 379 65.2
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 9.2e-127 457.6 277 79.8
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 1.6e-126 456.8 383 65.3
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 1.6e-126 456.8 381 66.1
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 4.6e-126 455.3 378 64.8
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 6.6e-125 451.4 277 79.4
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 2.5e-124 449.5 296 75.0
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 7.3e-124 448.0 368 67.1
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 3.6e-123 445.7 383 64.8
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 3.6e-123 445.7 383 64.8
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 8.0e-123 444.5 369 64.5
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 1.1e-122 444.1 380 65.0
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 8.9e-122 441.0 378 63.8
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 4.4e-121 438.7 380 63.4
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 5.8e-121 438.3 282 77.0
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 2.2e-120 436.4 265 81.9
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 4.1e-119 432.2 385 60.8
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 7.1e-119 431.4 362 64.6
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 1.0e-117 427.6 386 60.1
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 1.3e-117 427.2 374 63.4
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 1.7e-117 426.8 273 76.2
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 2.3e-117 426.4 383 61.9
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 7.3e-116 421.4 292 72.6
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 9.5e-116 421.0 281 74.7
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 1.6e-115 420.2 300 71.0
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 4.7e-115 418.7 257 80.5
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 4.7e-115 418.7 372 61.8
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 4.7e-115 418.7 373 58.7
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 1.4e-114 417.2 290 72.1
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 2.3e-114 416.4 370 62.2
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 2.3e-114 416.4 288 71.9
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 3.1e-114 416.0 373 64.1
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 6.8e-114 414.8 283 73.9
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 4.4e-113 412.1 379 61.7
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 9.9e-113 411.0 310 67.7
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 9.9e-113 411.0 278 72.7
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 1.3e-112 410.6 381 61.4
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 1.7e-112 410.2 325 67.1
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 1.7e-112 410.2 287 71.8
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 2.2e-112 409.8 287 71.8
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 2.9e-112 409.5 377 60.2
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 6.4e-112 408.3 266 75.9
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 1.1e-111 407.5 368 60.3
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 1.1e-111 407.5 368 61.4
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 1.9e-111 406.8 370 61.4
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 7.1e-111 404.8 378 61.9
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 7.8e-110 401.4 286 71.0
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 1.3e-109 400.6 367 60.2
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 1.7e-109 400.2 382 60.5
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 3.0e-109 399.4 371 60.6
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 5.1e-109 398.7 254 78.7
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 7.3e-108 394.8 271 73.8
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 1.2e-107 394.0 295 69.8
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 4.7e-107 392.1 273 72.2
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 1.1e-106 391.0 290 68.3
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 2.4e-106 389.8 275 71.3
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 3.1e-106 389.4 382 57.9
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 3.1e-106 389.4 348 60.3
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 5.2e-106 388.7 290 67.6
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 1.2e-105 387.5 282 69.9
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 1.2e-105 387.5 380 58.9
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.5e-105 387.1 290 66.9
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 6.4e-104 381.7 391 56.5
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.1e-103 380.9 399 53.1
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 3.2e-103 379.4 300 64.7
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 5.1e-101 372.1 283 65.4
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 6.6e-101 371.7 295 65.1
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 3.4e-97 359.4 276 67.0
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 5.8e-97 358.6 283 66.4
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 1.6e-83 313.9 283 56.5
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.8e-82 310.5 254 64.2
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 2.4e-82 310.1 378 51.9
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 2.5e-79 300.1 263 63.1
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 4.6e-78 295.8 225 64.0
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 6.0e-78 295.4 277 60.6
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 6.0e-78 295.4 273 53.1
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 6.5e-72 275.4 244 56.1
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 6.5e-72 275.4 379 47.5
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.4e-71 274.2 236 54.2
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 9.3e-71 271.6 278 57.9
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 3.5e-70 269.6 278 57.6
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 3.1e-66 256.5 200 65.0
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 4.1e-66 256.1 238 52.5
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 4.5e-65 252.7 241 50.6
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 6.9e-58 228.8 183 63.9
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.0e-53 214.9 114 85.1
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 3.7e-51 206.5 183 59.6
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 9.4e-47 191.8 152 55.9
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 1.6e-46 191.0 238 38.7
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 2.3e-45 187.2 205 44.9
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 4.0e-45 186.4 120 76.7
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 5.3e-42 176.0 235 51.1
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 1.7e-40 171.0 221 49.8
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 8.5e-40 168.7 218 39.9
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 2.7e-30 137.1 149 55.0
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 4.0e-29 133.3 159 51.6
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 7.5e-28 129.0 127 59.1
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 1.1e-26 125.2 75 82.7
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 3.8e-24 116.7 105 61.9
QL02p073352 Quercus lobata HOM05D006539 ORTHO05D008694 5.9e-17 92.8 67 71.6
Cre09.g392950 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D044332 6.6e-16 89.4 202 32.2
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 4.0e-13 80.1 105 43.8
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 2.7e-09 67.4 141 30.5
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 6.0e-09 66.2 144 32.6
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 1.7e-08 64.7 141 29.1
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.7e-08 64.7 141 29.1
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 3.0e-08 63.9 141 29.1
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 3.0e-08 63.9 149 28.2
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 3.9e-08 63.5 160 30.0
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 3.9e-08 63.5 132 29.5
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 5.0e-08 63.2 145 30.3
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 6.6e-08 62.8 148 30.4
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 6.6e-08 62.8 141 29.1
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.5e-07 61.6 141 29.8
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.9e-07 61.2 140 27.9
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.9e-07 61.2 140 30.7
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 3.3e-07 60.5 141 29.8
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 3.3e-07 60.5 179 29.1
MCO05G154 Micromonas commoda HOM05D006539 ORTHO05D044332 3.3e-07 60.5 218 25.2
FvH4_6g47571 Fragaria vesca HOM05D006539 ORTHO05D008694 4.3e-07 60.1 126 40.5
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 7.3e-07 59.3 143 30.1
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 9.5e-07 58.9 142 31.0
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 9.5e-07 58.9 166 24.7
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 1.2e-06 58.5 226 26.1
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 1.2e-06 58.5 168 29.8
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 2.1e-06 57.8 173 25.4
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 2.1e-06 57.8 151 32.5
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.8e-06 57.4 140 28.6
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 3.6e-06 57.0 154 26.0
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 3.6e-06 57.0 141 24.8
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 4.7e-06 56.6 152 30.9
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 6.2e-06 56.2 157 30.6
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 8.1e-06 55.8 174 25.9


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