Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G197400 Carya illinoinensis HOM05D002744 ORTHO05D006546 3.0e-199 698.4 365 100.0
Haze_17322 Corylus avellana HOM05D002744 ORTHO05D006546 3.2e-148 528.9 383 74.9
QL08p064289 Quercus lobata HOM05D002744 ORTHO05D006546 2.1e-144 516.2 364 74.7
Dinv21810 Davidia involucrata HOM05D002744 ORTHO05D006546 2.8e-144 515.8 362 73.8
Hma1.2p1_1240F.1_g269620 Hydrangea macrophylla HOM05D002744 ORTHO05D006546 1.1e-140 503.8 364 72.3
Prupe.2G259600 Prunus persica HOM05D002744 ORTHO05D006546 4.1e-140 501.9 365 71.8
vmacro09982 Vaccinium macrocarpon HOM05D002744 ORTHO05D006546 1.6e-139 500.0 381 68.8
GSVIVG01032722001 Vitis vinifera HOM05D002744 ORTHO05D006546 1.3e-138 496.9 366 72.4
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.7e-138 496.5 364 72.8
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 8.6e-138 494.2 364 72.3
CSS0032617 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.9e-137 493.0 362 71.3
FvH4_7g25510 Fragaria vesca HOM05D002744 ORTHO05D006546 4.3e-137 491.9 365 71.0
ClCG00G004700 Citrullus lanatus HOM05D002744 ORTHO05D006546 2.8e-136 489.2 365 71.0
ClCG06G010230 Citrullus lanatus HOM05D002744 ORTHO05D006546 2.8e-136 489.2 365 71.0
TAR623G1472 Trochodendron aralioides HOM05D002744 ORTHO05D006546 4.7e-136 488.4 358 70.9
ClCG07G004810 Citrullus lanatus HOM05D002744 ORTHO05D006546 1.4e-135 486.9 365 69.9
RcHm_v2.0_Chr1g0371491 Rosa chinensis HOM05D002744 ORTHO05D006546 1.4e-135 486.9 364 70.6
MD07G1229400 Malus domestica HOM05D002744 ORTHO05D006546 1.8e-135 486.5 365 70.4
Actinidia00987 Actinidia chinensis HOM05D002744 ORTHO05D006546 2.3e-135 486.1 362 70.2
Cc02_g05710 Coffea canephora HOM05D002744 ORTHO05D006546 2.3e-135 486.1 364 70.6
Rhsim09G0183300 Rhododendron simsii HOM05D002744 ORTHO05D006546 5.2e-135 485.0 380 67.4
Ca_06017_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 1.2e-134 483.8 358 69.3
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 7.6e-134 481.1 381 68.5
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.7e-133 479.9 381 68.2
MELO3C020109.2 Cucumis melo HOM05D002744 ORTHO05D006546 2.2e-133 479.6 365 69.3
Lj1C963G12 Lonicera japonica HOM05D002744 ORTHO05D006546 4.9e-133 478.4 362 70.4
Nn2g11076 Nelumbo nucifera HOM05D002744 ORTHO05D006546 4.9e-133 478.4 363 67.8
MBI16_g02735_MAGBIO Magnolia biondii HOM05D002744 ORTHO05D006546 6.4e-133 478.0 361 68.4
MD01G1161500 Malus domestica HOM05D002744 ORTHO05D006546 6.4e-133 478.0 365 70.1
CsaV3_5G010730 Cucumis sativus L. HOM05D002744 ORTHO05D006546 1.1e-132 477.2 365 69.6
Potri.008G075700 Populus trichocarpa HOM05D002744 ORTHO05D006546 1.2e-131 473.8 367 68.1
MSTRG.5049 Avicennia marina HOM05D002744 ORTHO05D006546 1.1e-129 467.2 370 66.2
CDE04G1223 Ceratophyllum demersum HOM05D002744 ORTHO05D006546 1.1e-129 467.2 361 67.0
Duzib106G0255 Durio zibethinus HOM05D002744 ORTHO05D006546 1.5e-129 466.8 363 67.8
Manes.07G139400 Manihot esculenta HOM05D002744 ORTHO05D006546 1.2e-128 463.8 366 70.2
Nitab4.5_0000928g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 4.7e-128 461.8 363 67.8
Sed0016960 Sechium edule HOM05D002744 ORTHO05D006546 1.1e-127 460.7 364 68.7
Ciclev10031901m.g Citrus clementina HOM05D002744 ORTHO05D006546 1.4e-127 460.3 368 67.9
Eucgr.J00153 Eucalyptus grandis HOM05D002744 ORTHO05D006546 1.4e-127 460.3 364 68.7
Glyma.02G230100 Glycine max HOM05D002744 ORTHO05D006546 4.0e-127 458.8 360 66.7
Lalb_Chr17g0336941 Lupinus albus HOM05D002744 ORTHO05D006546 1.2e-126 457.2 364 64.8
Glyma.14G196400 Glycine max HOM05D002744 ORTHO05D006546 3.4e-126 455.7 367 65.7
Lsat_1_v5_gn_2_125961 Lactuca sativa HOM05D002744 ORTHO05D006546 9.9e-126 454.1 360 67.2
CANSAT56G2377 Cannabis sativa HOM05D002744 ORTHO05D006546 2.9e-125 452.6 358 67.9
VMungo0647G1938 Vigna mungo HOM05D002744 ORTHO05D006546 3.2e-124 449.1 359 65.5
DCAR_011892 Daucus carota HOM05D002744 ORTHO05D006546 4.2e-124 448.7 364 65.4
Actinidia07807 Actinidia chinensis HOM05D002744 ORTHO05D006546 5.4e-124 448.4 361 65.4
PGSC0003DMG400024457 Solanum tuberosum HOM05D002744 ORTHO05D006546 5.4e-124 448.4 368 65.5
Thecc.10G007000 Theobroma cacao HOM05D002744 ORTHO05D006546 7.1e-124 448.0 363 66.1
PGR044G1552 Punica granatum HOM05D002744 ORTHO05D006546 1.6e-123 446.8 366 65.6
PGSC0003DMG400009431 Solanum tuberosum HOM05D002744 ORTHO05D006546 1.6e-123 446.8 367 66.8
SGA_v2.0_scaffold5G02937 Striga asiatica HOM05D000129 ORTHO05D000144 2.1e-123 446.4 364 65.1
Migut.N01809 Erythranthe guttata HOM05D002744 ORTHO05D006546 2.7e-123 446.0 369 65.0
Gohir.D10G253000 Gossypium hirsutum HOM05D002744 ORTHO05D006546 4.6e-123 445.3 364 65.1
Phvul.008G258300 Phaseolus vulgaris HOM05D002744 ORTHO05D006546 4.6e-123 445.3 359 65.7
Gorai.011G293300 Gossypium raimondii HOM05D002744 ORTHO05D006546 6.0e-123 444.9 364 65.1
LjContig00357g0012394 Lotus japonicus HOM05D002744 ORTHO05D006546 6.0e-123 444.9 367 65.4
Sopen02g017560 Solanum pennellii HOM05D002744 ORTHO05D006546 1.3e-122 443.7 367 66.5
Solyc02g068420.4 Solanum lycopersicum HOM05D002744 ORTHO05D006546 2.3e-122 443.0 367 66.5
Nitab4.5_0000263g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 1.5e-121 440.3 396 61.1
Sabra08G0056300 Salix brachista HOM05D002744 ORTHO05D006546 2.5e-121 439.5 428 57.2
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 3.3e-121 439.1 362 64.9
ECA238G3482 Erigeron canadensis HOM05D002744 ORTHO05D006546 9.6e-121 437.6 359 66.6
Gohir.A10G240800 Gossypium hirsutum HOM05D002744 ORTHO05D006546 3.6e-120 435.6 363 63.6
Psat0s1511g0040 Pisum sativum HOM05D002744 ORTHO05D006546 1.1e-119 434.1 358 64.2
Lj1g0011333 Lotus japonicus HOM05D002744 ORTHO05D006546 5.3e-119 431.8 381 63.0
Aqoxy2G00754 Aquilegia oxysepala HOM05D002744 ORTHO05D006546 6.9e-119 431.4 366 63.9
HanXRQChr10g0309081 Helianthus annuus HOM05D002744 ORTHO05D006546 6.9e-119 431.4 360 65.0
PSO832G1082 Papaver somniferum HOM05D002744 ORTHO05D006546 2.0e-118 429.9 382 61.3
PSO210G7497 Papaver somniferum HOM05D002744 ORTHO05D006546 1.7e-117 426.8 382 61.0
HanXRQChr07g0186551 Helianthus annuus HOM05D002744 ORTHO05D006546 3.8e-117 425.6 363 63.9
THA.LOC104824347 Tarenaya hassleriana HOM05D002744 ORTHO05D006546 5.6e-113 411.8 368 63.9
Sc10g0002810 Simmondsia chinensis HOM05D002744 ORTHO05D006546 2.1e-112 409.8 366 60.9
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 4.8e-112 408.7 340 65.9
Peaxi162Scf00284g00133 Petunia axillaris HOM05D002744 ORTHO05D006546 1.1e-111 407.5 366 62.3
THA.LOC104814944 Tarenaya hassleriana HOM05D002744 ORTHO05D006546 1.5e-110 403.7 381 60.9
Hund13511 Selenicereus undatus HOM05D002744 ORTHO05D006546 1.9e-108 396.7 364 58.2
Ah.05g176210 Amaranthus hybridus HOM05D002744 ORTHO05D006546 5.4e-108 395.2 365 58.6
TWI56G0434 Tripterygium wilfordii HOM05D002744 ORTHO05D006546 7.9e-107 391.3 367 61.6
TPR.G14721 Trifolium pratense HOM05D002744 ORTHO05D006546 1.3e-106 390.6 365 58.4
Os05g0144200 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D006546 5.1e-106 388.7 389 56.6
HPP92_001733 Vanilla planifolia HOM05D002744 ORTHO05D006546 5.6e-105 385.2 361 59.3
SalBow1G3835 Salvia bowleyana HOM05D002744 ORTHO05D006546 9.6e-105 384.4 343 61.8
EL10Ac2g04290 Beta vulgaris HOM05D002744 ORTHO05D006546 1.6e-104 383.6 364 58.2
arahy.Tifrunner.gnm1.ann1.T368MT Arachis hypogaea HOM05D002744 ORTHO05D006546 1.1e-103 380.9 364 58.2
Medtr5g083780 Medicago truncatula HOM05D002744 ORTHO05D006546 1.4e-103 380.6 368 59.2
Carub.0004s2268 Capsella rubella HOM05D002744 ORTHO05D006546 3.1e-103 379.4 388 57.5
Aa31LG5G19130 Aethionema arabicum HOM05D002744 ORTHO05D006546 2.0e-102 376.7 371 57.4
ATR1127G109 Amborella trichopoda HOM05D002744 ORTHO05D006546 1.3e-101 374.0 342 58.2
arahy.Tifrunner.gnm1.ann1.G9S3DZ Arachis hypogaea HOM05D002744 ORTHO05D006546 1.7e-101 373.6 364 57.4
Thhalv10016839m.g Eutrema salsugineum HOM05D002744 ORTHO05D006546 3.8e-101 372.5 369 57.2
CARHR135540 Cardamine hirsuta HOM05D002744 ORTHO05D006546 6.5e-101 371.7 366 58.7
Zm00001eb417890 Zea mays HOM05D002744 ORTHO05D006546 1.4e-100 370.5 391 53.7
SalBow8G4474 Salvia bowleyana HOM05D002744 ORTHO05D006546 3.2e-100 369.4 366 57.9
Sp4g22770 Schrenkiella parvula HOM05D002744 ORTHO05D006546 5.5e-100 368.6 384 55.7
SalBow8G2269 Salvia bowleyana HOM05D002744 ORTHO05D006546 1.6e-99 367.1 366 57.7
AL4G38260 Arabidopsis lyrata HOM05D002744 ORTHO05D006546 2.7e-99 366.3 433 50.3
AUR62022979 Chenopodium quinoa HOM05D002744 ORTHO05D006546 6.0e-99 365.2 366 56.8
AUR62012335 Chenopodium quinoa HOM05D002744 ORTHO05D006546 3.0e-98 362.8 365 55.9
BcaC02g12712 Brassica carinata HOM05D002744 ORTHO05D006546 5.7e-97 358.6 386 54.7
CDE03G0451 Ceratophyllum demersum HOM05D002744 ORTHO05D006546 2.8e-96 356.3 363 55.9
BcaB06g29140 Brassica carinata HOM05D002744 ORTHO05D006546 5.3e-95 352.1 384 53.9
A05p01680 Brassica napus HOM05D002744 ORTHO05D006546 1.0e-93 347.8 384 51.8
BraA05t19165Z Brassica rapa HOM05D002744 ORTHO05D006546 1.0e-93 347.8 384 51.8
unitig_27.g25095 Utricularia gibba HOM05D002744 ORTHO05D006546 3.8e-93 345.9 357 56.6
SEGI_20256 Sequoiadendron giganteum HOM05D002744 ORTHO05D006546 1.4e-92 344.0 379 52.0
BraA04t18540Z Brassica rapa HOM05D002744 ORTHO05D006546 5.3e-87 325.5 384 50.8
C04p68230 Brassica napus HOM05D002744 ORTHO05D006546 1.0e-85 321.2 384 50.5
BolC4t28327H Brassica oleracea HOM05D002744 ORTHO05D006546 1.0e-85 321.2 384 50.5
A04p30810 Brassica napus HOM05D002744 ORTHO05D006546 6.5e-85 318.5 384 50.0
BolC4t21844H Brassica oleracea HOM05D002744 ORTHO05D006546 8.5e-85 318.2 384 48.4
C04p01940 Brassica napus HOM05D002744 ORTHO05D006546 5.5e-84 315.5 383 48.3
BcaC02g07313 Brassica carinata HOM05D002744 ORTHO05D006546 2.7e-83 313.2 379 49.9
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 7.4e-81 305.1 336 53.6
Oeu026182.1 Olea europaea HOM05D002744 ORTHO05D006546 5.7e-73 278.9 238 64.3
Mapoly0001s0132 Marchantia polymorpha HOM05D002744 ORTHO05D006546 2.8e-72 276.6 390 41.3
CAN.G39.17 Capsicum annuum HOM05D002744 ORTHO05D006546 4.8e-72 275.8 235 63.8
Ca_27928_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 8.2e-72 275.0 299 52.8
AT2G40430 Arabidopsis thaliana HOM05D002744 ORTHO05D006546 4.1e-71 272.7 367 46.0
Ca_06977_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 1.2e-67 261.2 189 68.3
AagrBONN_evm.TU.Sc2ySwM_344.2566 Anthoceros agrestis HOM05D002744 ORTHO05D006546 3.8e-61 239.6 346 41.3
SHI18675 Sapria himalayana HOM05D002744 ORTHO05D006546 4.0e-58 229.6 283 47.7
CBR_g88544 Chara braunii HOM05D002744 ORTHO05D006546 6.3e-56 222.2 433 35.6
MBI16_g06795_MAGBIO Magnolia biondii HOM05D002744 ORTHO05D018022 1.4e-55 221.1 226 55.3
Pp3c22_7700 Physcomitrium patens HOM05D002744 ORTHO05D006546 7.7e-46 188.7 364 35.4
Oeu017758.1 Olea europaea HOM05D002744 ORTHO05D006546 1.8e-42 177.6 117 72.6
CAN.G39.16 Capsicum annuum HOM05D002744 ORTHO05D006546 2.0e-41 174.1 124 72.6
Solyc06g050820.3 Solanum lycopersicum HOM05D002744 ORTHO05D006546 2.3e-37 160.6 162 58.0
MCO01G055 Micromonas commoda HOM05D002744 ORTHO05D006546 4.7e-19 99.8 422 23.9
HanXRQChr04g0102991 Helianthus annuus HOM05D002744 ORTHO05D006546 2.0e-17 94.4 62 74.2
Aqoxy466s002 Aquilegia oxysepala HOM05D002744 ORTHO05D006546 4.4e-17 93.2 118 47.5
Atru.chr12.137 Acer truncatum HOM05D002744 ORTHO05D006546 1.7e-16 91.3 56 83.9
PRCOL_00000452 Prasinoderma coloniale HOM05D002744 ORTHO05D006546 1.9e-15 87.8 399 27.1
AUR62042571 Chenopodium quinoa HOM05D002744 ORTHO05D006546 2.4e-15 87.4 100 48.0
SHI18673 Sapria himalayana HOM05D002744 ORTHO05D006546 3.9e-13 80.1 56 69.6
Lsat_1_v5_gn_5_82241 Lactuca sativa HOM05D002744 ORTHO05D006546 2.8e-11 73.9 50 66.0
Cre07.g348250 Chlamydomonas reinhardtii HOM05D002744 ORTHO05D006546 3.6e-11 73.6 249 27.3
arahy.Tifrunner.gnm1.ann1.LJQ8FI Arachis hypogaea HOM05D002744 ORTHO05D006546 8.1e-11 72.4 60 63.3
arahy.Tifrunner.gnm1.ann1.WF3XAB Arachis hypogaea HOM05D002744 ORTHO05D006546 6.8e-10 69.3 59 62.7
arahy.Tifrunner.gnm1.ann1.XR4RRM Arachis hypogaea HOM05D002744 ORTHO05D006546 1.5e-09 68.2 59 62.7
arahy.Tifrunner.gnm1.ann1.U77MTX Arachis hypogaea HOM05D002744 ORTHO05D006546 2.0e-09 67.8 59 61.0
Cfa025636 Carpinus fangiana HOM05D002744 ORTHO05D006546 1.6e-06 58.2 420 26.2


User provided reference genes

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