Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 2.9e-80 302.4 218 100.0
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 8.1e-51 204.5 226 75.7
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 4.2e-47 192.2 187 87.7
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.2e-46 190.7 227 76.2
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.2e-46 190.7 205 76.6
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.6e-46 190.3 171 91.2
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 2.1e-46 189.9 171 90.6
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 3.5e-46 189.1 222 76.1
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 3.5e-46 189.1 218 77.5
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 2.3e-45 186.4 171 90.1
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 3.9e-45 185.7 224 71.9
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 6.7e-45 184.9 221 75.1
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.1e-44 184.1 219 74.4
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 1.1e-44 184.1 219 75.3
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 1.1e-44 184.1 195 82.6
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 1.1e-44 184.1 221 75.6
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.5e-44 183.7 174 89.1
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.9e-44 183.3 222 77.0
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 7.4e-44 181.4 220 75.9
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 9.6e-44 181.0 221 73.8
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 1.3e-43 180.6 228 74.1
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 1.3e-43 180.6 220 75.0
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.6e-43 180.3 174 87.4
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 3.7e-43 179.1 223 73.1
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 4.8e-43 178.7 222 75.7
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 4.8e-43 178.7 220 70.5
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 6.3e-43 178.3 217 76.0
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 6.3e-43 178.3 218 75.2
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 1.8e-42 176.8 223 72.2
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 2.4e-42 176.4 227 71.4
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.1e-42 176.0 220 74.1
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 4.1e-42 175.6 219 74.0
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 4.1e-42 175.6 224 73.2
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 5.3e-42 175.3 235 71.5
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 5.3e-42 175.3 174 86.8
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 5.3e-42 175.3 219 73.1
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 6.9e-42 174.9 222 72.5
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 6.9e-42 174.9 221 73.8
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 1.2e-41 174.1 233 69.5
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 1.2e-41 174.1 233 70.4
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.5e-41 173.7 183 81.4
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.5e-41 173.7 172 86.0
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 2.6e-41 172.9 220 74.5
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 4.5e-41 172.2 197 79.7
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.3e-40 170.6 230 70.0
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 2.2e-40 169.9 227 74.0
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.9e-40 169.5 218 70.6
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 3.8e-40 169.1 234 69.7
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 3.8e-40 169.1 212 75.9
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 3.8e-40 169.1 172 82.0
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 8.5e-40 167.9 223 71.3
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.4e-39 167.2 218 70.2
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.4e-39 167.2 218 70.2
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.4e-39 167.2 174 78.2
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.9e-39 166.8 219 74.4
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.2e-38 164.1 239 63.6
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.2e-38 164.1 222 71.2
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 1.6e-38 163.7 237 68.8
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.1e-38 163.3 206 65.5
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 3.6e-38 162.5 234 60.7
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 3.6e-38 162.5 224 66.1
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 4.6e-38 162.2 218 69.7
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 7.9e-38 161.4 221 71.0
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 2.3e-37 159.8 223 72.6
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 3.0e-37 159.5 174 83.9
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 5.1e-37 158.7 223 68.6
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 1.1e-36 157.5 208 75.0
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 1.5e-36 157.1 171 81.3
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 2.5e-36 156.4 227 67.8
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 5.7e-36 155.2 229 69.0
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 1.3e-35 154.1 186 74.2
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 4.8e-35 152.1 223 68.6
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 6.3e-35 151.8 166 80.1
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 2.4e-34 149.8 204 71.6
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 2.4e-34 149.8 204 71.6
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 2.4e-34 149.8 204 71.6
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 2.0e-33 146.7 142 93.7
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 7.7e-33 144.8 208 70.2
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 7.7e-33 144.8 165 79.4
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.7e-32 143.7 225 65.3
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 2.2e-32 143.3 224 66.1
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 2.9e-32 142.9 225 66.7
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 2.9e-32 142.9 225 66.7
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 3.8e-32 142.5 201 69.7
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 6.5e-32 141.7 144 90.3
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 1.1e-31 141.0 162 80.2
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.2e-31 139.4 201 69.2
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 5.5e-31 138.7 183 72.7
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 5.5e-31 138.7 169 80.5
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 1.6e-30 137.1 214 69.2
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 6.1e-30 135.2 213 67.6
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 2.6e-28 129.8 183 72.7
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 3.3e-28 129.4 170 72.9
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.8e-27 126.3 167 64.7
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 6.9e-26 121.7 166 65.7
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 3.8e-24 115.9 182 72.0
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 2.1e-22 110.2 178 64.6
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 6.7e-21 105.1 56 85.7
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 2.0e-20 103.6 229 47.6
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 2.2e-19 100.1 112 56.2
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 2.2e-19 100.1 50 92.0
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 2.8e-19 99.8 126 86.5
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.1e-18 97.8 182 64.8
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 7.0e-18 95.1 111 57.7
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 2.0e-17 93.6 111 56.8
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.3e-16 90.9 110 54.5
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 2.2e-16 90.1 184 65.8
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 2.9e-16 89.7 106 56.6
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 5.0e-16 89.0 57 80.7
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.8e-13 80.5 38 92.1
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 2.6e-12 76.6 56 76.8
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 7.5e-12 75.1 38 89.5
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.4e-10 70.1 47 70.2
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 4.5e-09 65.9 37 81.1
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 5.0e-08 62.4 56 53.6
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 7.2e-07 58.5 37 70.3


User provided reference genes

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