Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 0.0e+00 1092.0 538 100.0
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 3.2e-258 894.8 538 82.9
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 9.4e-258 893.3 545 82.0
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 2.7e-249 865.1 622 72.2
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 3.6e-249 864.8 538 79.7
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 1.4e-248 862.8 538 79.2
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 2.0e-247 859.0 538 77.9
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 6.3e-246 854.0 538 78.8
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.8e-245 852.4 538 79.0
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 3.5e-244 848.2 536 78.9
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 3.2e-242 841.6 539 78.1
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 5.5e-242 840.9 549 77.2
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 7.2e-242 840.5 537 77.3
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 7.2e-242 840.5 538 77.7
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 1.0e-240 836.6 542 78.0
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.0e-240 836.6 538 77.3
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.4e-240 836.3 537 76.9
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 8.8e-240 833.6 539 77.0
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 4.8e-238 827.8 538 76.8
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 2.0e-236 822.4 538 77.0
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 4.5e-236 821.2 540 75.6
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 1.0e-235 820.1 538 75.3
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 3.8e-235 818.1 562 73.7
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 4.7e-233 811.2 541 75.8
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 2.6e-231 805.4 538 74.0
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.3e-230 803.1 538 73.6
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 4.9e-230 801.2 544 74.1
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 7.0e-229 797.3 538 74.5
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 8.6e-227 790.4 538 74.2
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 3.6e-225 785.0 538 72.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 6.1e-225 784.3 540 73.3
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 5.2e-224 781.2 489 78.9
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 3.4e-223 778.5 540 74.4
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 9.8e-223 776.9 540 74.4
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 2.2e-222 775.8 538 72.3
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.9e-221 772.7 541 71.9
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 2.4e-221 772.3 544 71.3
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 5.4e-221 771.2 538 72.5
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.6e-220 769.6 526 73.6
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.5e-220 768.5 540 73.5
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 3.5e-220 768.5 538 72.3
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 5.0e-219 764.6 539 71.8
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 5.6e-218 761.1 544 71.0
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 9.5e-218 760.4 539 71.8
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 3.6e-217 758.4 540 69.8
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 5.2e-216 754.6 536 71.3
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 2.0e-215 752.7 546 70.3
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 3.4e-215 751.9 538 72.7
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 5.4e-213 744.6 539 70.7
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.0e-213 744.2 544 70.2
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 9.2e-213 743.8 539 70.9
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 3.9e-211 738.4 628 64.0
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 1.6e-209 733.0 573 66.8
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 3.6e-209 731.9 541 69.3
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 8.1e-209 730.7 541 69.3
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.1e-208 730.3 545 68.4
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.1e-205 720.3 538 68.0
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 2.1e-204 716.1 546 67.6
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 2.7e-204 715.7 541 68.2
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 4.6e-204 714.9 541 68.2
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 1.0e-203 713.8 541 68.0
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.7e-203 713.0 475 75.6
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 6.6e-203 711.1 540 68.0
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 4.3e-202 708.4 547 66.5
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.2e-201 706.8 539 69.4
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 2.1e-201 706.1 544 67.3
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 4.7e-201 704.9 553 64.6
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.1e-200 703.7 543 67.4
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 2.6e-199 699.1 536 69.0
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.7e-198 696.4 540 68.1
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 4.6e-196 688.3 537 64.1
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 6.0e-196 688.0 467 73.7
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 7.8e-196 687.6 544 65.4
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.3e-195 686.0 582 61.9
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.3e-195 686.0 582 61.9
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 6.9e-192 674.5 411 82.5
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.3e-190 670.2 493 66.9
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 2.2e-190 669.5 537 63.3
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.3e-187 660.2 537 62.6
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 6.6e-187 657.9 494 66.8
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.8e-184 649.8 538 63.8
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.1e-184 649.0 600 59.3
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.0e-184 648.7 539 63.8
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 6.9e-184 647.9 442 75.3
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 6.7e-179 631.3 606 57.3
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 7.4e-178 627.9 652 52.8
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 2.2e-174 616.3 461 68.3
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 1.8e-163 580.1 438 68.7
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 4.1e-160 568.9 536 56.9
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 3.8e-158 562.4 536 55.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 2.2e-153 546.6 549 53.4
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.1e-152 544.3 489 57.9
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 2.0e-143 513.5 346 74.9
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.1e-140 503.4 347 74.9
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.3e-129 467.6 524 51.0
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.5e-125 454.1 311 73.0
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.7e-121 440.7 303 70.6
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 5.9e-119 432.2 881 33.6
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 2.9e-118 429.9 968 32.6
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.1e-116 423.7 843 35.2
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 8.9e-115 418.3 372 59.4
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.9e-113 412.5 890 32.9
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 2.4e-112 410.2 280 72.5
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 7.0e-112 408.7 960 31.7
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 3.3e-109 399.8 309 66.7
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 7.3e-109 398.7 248 75.8
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.6e-103 379.4 305 63.0
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 4.7e-100 369.4 235 79.1
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.6e-87 326.2 262 63.4
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.1e-80 305.1 195 80.0
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 1.1e-69 268.5 171 78.9
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 5.3e-67 259.6 265 55.5
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 8.4e-65 252.3 286 49.0
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 1.5e-34 151.8 788 23.4
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 5.0e-33 146.7 120 62.5
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 3.1e-27 127.5 104 68.3
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 5.7e-21 106.7 103 56.3
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 1.8e-19 101.7 63 76.2
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.6e-18 98.6 248 26.6
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 3.6e-15 87.4 68 60.3
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 8.0e-15 86.3 106 50.9
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 1.8e-14 85.1 334 25.4
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 4.8e-12 77.0 54 75.9
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 2.5e-08 64.7 43 76.7
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 2.7e-07 61.2 34 76.5
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.0e-06 59.3 50 60.0


User provided reference genes

Program Settings