Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 7.5e-272 939.9 462 100.0
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 7.6e-248 860.1 468 91.2
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 8.1e-242 840.1 456 89.5
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.8e-241 839.0 463 88.6
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.7e-239 832.4 453 87.6
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 3.8e-239 831.2 463 87.7
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 6.4e-239 830.5 454 89.2
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 8.4e-239 830.1 462 86.8
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 2.4e-238 828.6 461 88.9
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 9.3e-238 826.6 460 87.6
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.1e-237 825.5 460 87.4
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 6.0e-237 823.9 460 87.4
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.3e-236 822.8 470 85.7
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.0e-236 821.6 458 86.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.9e-236 821.2 452 86.5
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.5e-235 819.3 461 87.0
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.3e-235 818.1 462 85.5
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.6e-234 815.8 455 86.6
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.1e-234 815.5 454 85.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 2.1e-234 815.5 452 87.6
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.8e-234 815.1 435 89.9
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 2.8e-234 815.1 461 87.2
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 3.6e-234 814.7 455 86.4
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 4.8e-234 814.3 480 84.4
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 4.8e-234 814.3 444 87.4
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 6.2e-234 813.9 431 89.3
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.1e-233 813.1 425 91.3
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.1e-233 813.1 462 85.3
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.4e-233 812.8 462 85.7
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.4e-233 812.8 462 85.5
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.8e-233 812.4 462 85.3
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.2e-232 809.7 462 84.4
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.5e-232 809.3 456 85.7
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.0e-232 808.9 465 86.2
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.4e-232 808.1 466 86.1
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 5.8e-232 807.4 461 84.4
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 8.4e-231 803.5 455 85.5
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.4e-230 802.7 465 84.3
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 7.1e-230 800.4 465 84.7
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 7.1e-230 800.4 462 83.8
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 9.3e-230 800.0 464 83.6
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.2e-229 799.7 462 85.1
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.6e-229 799.3 456 84.6
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 3.5e-229 798.1 462 82.7
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.5e-229 798.1 456 84.2
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 3.5e-229 798.1 454 85.0
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 6.0e-229 797.3 456 83.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.3e-228 796.2 432 87.7
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.8e-228 795.8 459 82.6
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 3.0e-228 795.0 456 83.6
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 5.1e-228 794.3 462 82.5
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.5e-227 792.7 426 89.2
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.9e-227 792.3 463 82.3
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.9e-227 792.3 441 85.5
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 2.5e-227 792.0 489 79.3
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 2.5e-227 792.0 426 87.3
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 4.3e-227 791.2 456 83.1
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 9.6e-227 790.0 456 83.3
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 5.3e-225 784.3 459 82.4
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 3.4e-224 781.6 434 85.7
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 7.6e-224 780.4 450 82.4
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.7e-223 779.2 465 80.9
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 2.9e-223 778.5 466 80.3
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 4.9e-223 777.7 464 81.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 8.4e-223 776.9 445 83.1
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.4e-222 776.2 430 85.3
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.4e-222 776.2 484 78.7
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 2.5e-222 775.4 415 87.5
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.0e-220 770.0 434 83.6
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.1e-219 766.5 418 85.2
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 7.4e-219 763.8 443 81.7
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-217 759.6 452 80.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 6.9e-217 757.3 434 84.6
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.2e-216 756.5 449 82.4
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 4.5e-216 754.6 401 90.0
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 2.9e-215 751.9 453 79.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 6.5e-215 750.7 422 82.2
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 7.9e-213 743.8 422 84.1
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 2.5e-211 738.8 434 80.9
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 7.4e-211 737.3 401 90.8
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 4.8e-210 734.6 432 79.9
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 8.2e-210 733.8 401 86.0
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.4e-209 733.0 494 74.7
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.9e-209 730.7 474 77.4
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.1e-205 719.2 421 78.4
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.1e-205 719.2 450 79.6
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.0e-204 716.8 448 75.2
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 5.7e-203 711.1 382 89.0
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 6.3e-202 707.6 420 76.9
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 6.3e-202 707.6 492 73.4
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 9.1e-201 703.7 443 76.7
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 4.7e-197 691.4 392 85.7
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 7.9e-197 690.6 561 65.2
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.5e-190 669.8 357 89.6
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 2.5e-190 669.1 387 82.9
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 5.5e-190 667.9 454 72.7
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 3.5e-184 648.7 445 68.5
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 6.1e-181 637.9 427 73.5
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.7e-173 612.5 377 80.4
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 3.5e-168 595.5 446 63.9
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.7e-167 593.2 426 66.2
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 4.7e-165 585.1 495 64.0
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 3.7e-146 522.3 271 93.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 3.5e-144 515.8 309 81.6
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.1e-141 506.5 462 59.1
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 8.1e-141 504.6 317 79.2
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.1e-134 484.2 374 62.3
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 3.3e-118 429.5 259 83.0
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 2.8e-69 266.9 147 85.0
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.1e-64 250.8 190 67.9
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.2e-61 240.7 147 76.9
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.3e-42 177.6 99 83.8
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 5.4e-28 129.8 79 74.7
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 6.0e-27 126.3 70 87.1
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.9e-20 104.8 57 84.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.9e-17 94.7 49 91.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.6e-11 73.6 46 71.7
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.3e-10 72.0 49 67.3
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.6e-10 69.7 42 71.4
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 8.1e-08 62.8 40 77.5


User provided reference genes

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