Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 1.9e-153 545.8 276 100.0
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 1.6e-128 463.0 271 86.7
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 3.4e-126 455.3 281 83.6
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 1.1e-124 450.3 280 83.2
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 2.0e-118 429.5 278 81.7
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 2.0e-110 402.9 282 77.7
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 1.7e-109 399.8 282 77.0
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 6.0e-107 391.3 279 75.6
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 1.7e-106 389.8 283 75.3
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 1.7e-106 389.8 289 72.3
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 1.5e-105 386.7 284 72.2
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 2.5e-105 386.0 279 73.1
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 4.3e-105 385.2 241 82.6
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 5.6e-105 384.8 283 73.5
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 7.3e-105 384.4 267 76.4
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 9.5e-105 384.0 280 73.2
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 1.6e-104 383.3 285 72.3
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 1.6e-104 383.3 277 73.3
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 2.1e-104 382.9 284 72.2
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 2.1e-104 382.9 289 74.0
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 2.1e-104 382.9 291 73.9
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 2.1e-104 382.9 281 74.4
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 2.8e-104 382.5 267 75.7
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 3.6e-104 382.1 282 73.0
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 4.7e-104 381.7 262 76.7
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 4.7e-104 381.7 240 80.8
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 8.0e-104 380.9 292 71.9
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 8.0e-104 380.9 290 71.4
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.1e-103 380.6 281 74.4
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 1.1e-103 380.6 278 71.9
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 1.4e-103 380.2 286 71.7
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 1.4e-103 380.2 286 73.1
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.4e-103 380.2 281 73.3
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 3.1e-103 379.0 283 73.9
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 3.1e-103 379.0 280 73.6
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 4.0e-103 378.6 263 76.4
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 4.0e-103 378.6 280 72.1
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 1.5e-102 376.7 263 76.0
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 1.5e-102 376.7 282 73.8
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 2.6e-102 375.9 232 82.3
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 4.4e-102 375.2 272 72.8
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 4.4e-102 375.2 276 71.4
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 1.3e-101 373.6 279 72.0
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 1.3e-101 373.6 280 72.9
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 1.7e-101 373.2 281 71.9
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 2.2e-101 372.9 282 71.3
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 2.2e-101 372.9 223 83.4
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 2.2e-101 372.9 239 77.8
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 2.2e-101 372.9 283 71.4
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 3.7e-101 372.1 285 72.3
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 3.7e-101 372.1 283 68.9
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 3.7e-101 372.1 267 75.3
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 3.7e-101 372.1 277 73.6
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 6.4e-101 371.3 281 70.8
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 6.4e-101 371.3 200 90.5
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 1.1e-100 370.5 278 72.7
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 1.4e-100 370.2 201 90.0
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 1.9e-100 369.8 282 69.9
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 2.4e-100 369.4 227 81.9
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 3.2e-100 369.0 275 72.7
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 5.4e-100 368.2 282 71.6
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 1.2e-99 367.1 281 70.1
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 1.6e-99 366.7 264 72.7
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 1.6e-99 366.7 225 80.0
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 2.0e-99 366.3 203 88.2
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 2.7e-99 365.9 283 69.6
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 2.7e-99 365.9 269 72.9
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 3.5e-99 365.5 290 67.6
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 3.5e-99 365.5 211 86.7
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 3.5e-99 365.5 282 69.5
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 3.5e-99 365.5 281 69.4
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 4.6e-99 365.2 217 82.0
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 6.0e-99 364.8 276 70.7
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 7.8e-99 364.4 278 71.9
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 1.0e-98 364.0 238 78.6
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.0e-98 364.0 278 71.6
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.0e-98 364.0 276 72.1
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.0e-98 364.0 259 75.7
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 2.3e-98 362.8 279 68.5
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 2.3e-98 362.8 222 82.0
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 3.0e-98 362.5 225 80.0
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 3.0e-98 362.5 225 80.0
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 3.9e-98 362.1 283 68.6
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 3.9e-98 362.1 275 69.1
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 6.6e-98 361.3 227 80.2
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 6.6e-98 361.3 281 68.3
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 8.6e-98 360.9 285 66.7
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 1.9e-97 359.8 259 72.6
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.3e-97 359.0 272 71.3
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 4.3e-97 358.6 200 87.5
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 4.3e-97 358.6 303 64.7
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 1.2e-96 357.1 266 71.8
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 1.6e-96 356.7 288 66.7
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 1.6e-96 356.7 267 70.0
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 2.1e-96 356.3 275 68.4
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 2.1e-96 356.3 274 68.2
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 3.6e-96 355.5 252 72.6
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 4.7e-96 355.1 263 68.8
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 6.2e-96 354.8 268 69.4
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 1.8e-95 353.2 203 84.7
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 3.4e-94 349.0 252 72.2
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 4.4e-94 348.6 259 70.3
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 4.4e-94 348.6 296 65.2
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 5.8e-94 348.2 203 84.7
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 9.9e-94 347.4 281 66.2
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 1.7e-93 346.7 269 67.3
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 2.2e-93 346.3 215 79.1
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 6.4e-93 344.7 229 75.5
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 1.4e-92 343.6 272 68.4
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 1.9e-92 343.2 235 75.3
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 1.3e-90 337.0 198 83.3
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.7e-90 336.7 320 59.7
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 3.9e-90 335.5 198 82.8
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 2.5e-89 332.8 271 66.4
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 3.4e-86 322.4 307 61.2
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 7.6e-86 321.2 260 68.8
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 2.2e-85 319.7 273 63.7
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 8.4e-85 317.8 166 92.8
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 1.4e-84 317.0 213 76.5
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 4.1e-84 315.5 196 79.1
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 4.1e-84 315.5 287 64.8
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 3.9e-82 308.9 198 78.8
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 7.3e-81 304.7 318 56.0
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 1.4e-79 300.4 274 63.1
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 1.5e-78 297.0 196 75.0
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 2.6e-78 296.2 166 88.0
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 3.8e-77 292.4 199 72.4
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 8.4e-77 291.2 210 71.9
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 2.4e-76 289.7 156 89.1
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 3.2e-76 289.3 235 68.5
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.1e-75 286.6 239 64.0
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 4.6e-75 285.4 281 58.7
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 4.6e-75 285.4 165 82.4
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.3e-74 283.9 300 54.3
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 9.6e-73 277.7 285 56.5
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 4.8e-72 275.4 230 66.1
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 6.2e-72 275.0 224 66.1
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 6.9e-71 271.6 198 71.2
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 8.4e-69 264.6 148 85.1
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 2.1e-67 260.0 219 64.4
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.3e-66 257.3 159 81.8
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 1.9e-65 253.4 212 65.1
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.4e-62 242.7 149 81.2
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 1.1e-60 237.7 167 74.9
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 1.9e-60 236.9 155 77.4
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 2.1e-59 233.4 278 51.1
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 3.3e-57 226.1 190 67.9
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 1.1e-55 221.1 133 77.4
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 6.9e-55 218.4 204 48.0
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 4.3e-49 199.1 178 61.8
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.8e-47 193.7 129 77.5
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 2.2e-45 186.8 321 41.1
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 4.5e-38 162.5 188 43.1
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 7.7e-38 161.8 198 49.0
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 8.5e-37 158.3 219 40.2
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 2.2e-32 143.7 225 39.6
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 7.0e-31 138.7 84 81.0
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 2.0e-22 110.5 62 85.5
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 3.5e-22 109.8 62 85.5
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 8.5e-21 105.1 140 50.7
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 1.8e-18 97.4 59 83.1
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.0e-13 81.6 156 39.7
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 7.2e-12 75.5 84 50.0
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 5.2e-10 69.3 36 88.9
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 6.8e-10 68.9 40 80.0
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 2.0e-09 67.4 41 78.0
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 5.7e-09 65.9 118 35.6
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 9.8e-09 65.1 42 71.4
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 6.3e-08 62.4 32 90.6
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 3.1e-07 60.1 42 69.0
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 2.0e-06 57.4 34 79.4


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