Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 5.5e-242 840.5 412 100.0
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 8.1e-201 703.7 419 82.6
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 3.2e-197 691.8 412 82.8
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 1.0e-195 686.8 412 80.8
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.5e-194 682.9 412 80.8
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 1.3e-193 679.9 412 81.6
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.6e-193 679.5 412 78.6
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 3.1e-192 675.2 411 82.5
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 3.4e-191 671.8 412 79.1
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 7.6e-191 670.6 495 69.5
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 1.4e-189 666.4 414 79.5
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 4.2e-189 664.8 412 77.7
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 2.7e-188 662.1 412 78.9
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 4.6e-188 661.4 412 79.6
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.0e-187 660.2 412 77.7
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 3.0e-187 658.7 421 77.2
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 3.3e-186 655.2 413 77.7
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.6e-185 652.9 435 75.2
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 4.8e-185 651.4 426 75.6
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.1e-184 650.2 412 77.9
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.4e-184 649.8 412 78.2
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 2.6e-183 645.6 409 78.0
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 2.2e-182 642.5 410 76.1
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 3.0e-179 632.1 414 75.1
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 5.1e-179 631.3 412 76.2
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 6.7e-179 630.9 415 75.7
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 4.3e-178 628.2 412 75.0
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 1.3e-177 626.7 411 75.4
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 3.1e-176 622.1 411 74.5
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 2.6e-175 619.0 412 73.5
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 7.6e-175 617.5 412 73.3
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.7e-174 616.3 410 73.4
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 3.8e-174 615.1 414 74.2
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 8.4e-174 614.0 416 73.3
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 1.4e-173 613.2 411 73.7
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 5.5e-173 611.3 417 72.7
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 2.7e-172 609.0 410 73.9
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.0e-171 607.1 412 73.1
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.8e-171 606.3 412 73.1
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 1.8e-171 606.3 412 73.8
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 3.0e-171 605.5 412 74.5
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 6.7e-171 604.4 366 79.8
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 1.9e-170 602.8 416 71.9
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 4.3e-170 601.7 412 72.1
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 9.6e-170 600.5 402 74.6
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.7e-169 598.6 413 74.1
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 3.7e-169 598.6 413 73.8
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 8.2e-169 597.4 412 74.0
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.1e-168 597.0 413 73.8
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.6e-167 592.4 413 73.1
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 2.2e-166 589.3 412 71.6
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.9e-166 589.0 418 72.5
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 3.2e-165 585.5 412 71.4
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 4.2e-165 585.1 414 71.7
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 9.3e-165 583.9 409 70.9
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 9.3e-165 583.9 410 71.7
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 9.3e-165 583.9 410 71.7
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.1e-164 582.8 410 71.5
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 2.7e-164 582.4 415 72.3
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 6.1e-164 581.3 414 71.3
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 5.1e-163 578.2 412 71.1
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 6.7e-163 577.8 414 69.6
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.6e-161 573.2 414 70.3
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.2e-161 572.8 409 70.7
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 2.2e-161 572.8 413 70.5
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 2.8e-161 572.4 413 68.3
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 5.3e-160 568.2 410 70.2
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 5.9e-159 564.7 413 69.7
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.3e-158 563.5 413 68.5
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.4e-157 560.1 477 61.6
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.4e-157 560.1 477 61.6
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 5.5e-157 558.1 447 65.3
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 5.7e-154 548.1 412 69.7
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 4.8e-153 545.0 424 65.1
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 2.4e-152 542.7 412 67.0
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 5.3e-152 541.6 492 60.2
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 6.5e-150 534.6 412 65.3
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 2.3e-147 526.2 332 76.8
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 3.3e-146 522.3 412 66.0
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 6.3e-145 518.1 349 75.1
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 3.1e-144 515.8 412 64.8
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 4.1e-144 515.4 337 74.8
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 7.0e-144 514.6 412 65.3
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 2.9e-142 509.2 366 68.0
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.2e-140 503.8 413 65.4
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.4e-138 495.4 474 59.1
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 2.6e-130 469.5 526 50.2
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 3.7e-129 465.7 459 55.8
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 1.8e-128 463.4 334 71.3
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 6.8e-123 444.9 374 62.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 4.3e-117 425.6 423 53.0
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.1e-112 411.0 312 67.0
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 7.8e-111 404.8 264 76.5
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.7e-110 403.7 412 54.1
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 8.0e-108 394.8 411 52.6
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 7.5e-98 361.7 364 54.4
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.5e-93 347.4 264 66.3
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 2.5e-93 346.7 404 48.8
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 6.0e-87 325.5 241 66.8
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 1.3e-86 324.3 197 82.7
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.8e-83 313.9 759 31.0
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 8.4e-81 305.1 268 58.6
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 6.2e-76 288.9 284 52.5
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.8e-75 287.3 721 31.6
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 1.7e-73 280.8 171 79.5
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.9e-73 280.0 269 54.6
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.7e-71 273.5 269 56.1
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 1.0e-62 245.0 183 65.0
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 3.9e-62 243.0 287 47.4
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.1e-61 241.5 175 66.9
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.1e-61 241.5 183 68.3
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.5e-50 203.0 178 59.0
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 1.1e-45 188.3 120 73.3
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.8e-38 164.5 129 67.4
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 6.7e-30 136.0 105 68.6
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 7.2e-24 115.9 103 58.3
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 1.6e-23 114.8 73 75.3
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 4.7e-23 113.2 599 22.9
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 1.1e-19 102.1 106 54.7
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 4.0e-14 83.6 65 60.0
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 2.2e-12 77.8 54 77.8
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 4.2e-08 63.5 47 68.1
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 7.2e-08 62.8 301 23.9
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 1.0e-06 58.9 43 67.4
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 8.8e-06 55.8 50 56.0


User provided reference genes

Program Settings