Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.4e-257 892.5 458 100.0
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.4e-230 802.7 458 88.9
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 9.2e-230 800.0 460 89.3
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.3e-220 769.6 467 85.4
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.7e-215 752.7 460 84.6
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 4.6e-213 744.6 461 82.4
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 8.7e-212 740.3 460 82.2
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 3.6e-210 734.9 462 82.5
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 3.6e-210 734.9 461 81.8
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 3.1e-209 731.9 466 82.0
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 3.1e-209 731.9 469 82.5
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 6.9e-209 730.7 462 81.4
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 9.0e-209 730.3 466 80.7
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.5e-208 729.6 461 78.7
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 2.6e-208 728.8 462 79.9
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.7e-207 726.1 466 80.5
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 3.8e-207 724.9 459 80.2
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 3.8e-207 724.9 461 81.1
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 1.1e-206 723.4 461 81.1
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.2e-206 721.8 461 80.5
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 3.2e-206 721.8 461 80.9
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 3.2e-206 721.8 461 80.3
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 5.4e-206 721.1 460 81.5
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 7.1e-206 720.7 461 80.0
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.6e-205 719.5 461 81.3
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 3.5e-205 718.4 461 80.3
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 4.6e-205 718.0 460 79.1
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 4.6e-205 718.0 461 80.7
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.8e-204 716.1 464 78.4
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 4.3e-203 711.4 487 76.8
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 5.6e-203 711.1 458 78.6
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.6e-202 709.5 458 78.4
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 1.6e-202 709.5 461 76.8
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 1.6e-202 709.5 461 79.0
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 2.8e-202 708.8 465 79.4
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 4.8e-202 708.0 464 79.7
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 8.1e-202 707.2 465 79.1
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 3.1e-201 705.3 460 76.7
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 6.9e-201 704.1 427 83.4
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.2e-200 703.4 469 77.6
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 2.6e-200 702.2 417 84.4
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 4.5e-200 701.4 460 77.2
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 5.8e-200 701.0 460 76.3
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 5.8e-200 701.0 468 76.7
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 9.9e-200 700.3 462 79.4
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.7e-199 699.5 427 82.7
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.4e-198 696.4 460 76.1
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 1.4e-198 696.4 461 75.9
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 4.2e-198 694.9 440 80.9
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 1.6e-197 693.0 461 75.7
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 4.6e-197 691.4 455 77.4
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.3e-196 689.9 468 74.1
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.3e-196 689.1 460 76.3
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.3e-196 689.1 462 75.3
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 8.7e-196 687.2 481 73.4
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.5e-195 686.4 459 77.1
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.5e-195 685.6 464 75.4
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 9.6e-195 683.7 464 75.0
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 1.3e-194 683.3 464 75.6
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 4.8e-194 681.4 461 75.9
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 8.1e-194 680.6 461 76.1
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 1.1e-193 680.2 468 74.8
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 1.4e-193 679.9 458 75.1
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.4e-193 679.1 459 76.3
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 4.0e-193 678.3 469 75.3
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.2e-192 676.8 464 74.8
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.2e-192 676.8 464 75.0
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 5.8e-192 674.5 464 73.9
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 1.0e-191 673.7 469 72.7
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 1.3e-191 673.3 461 74.2
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.2e-191 672.5 463 73.9
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 4.9e-191 671.4 467 74.7
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 6.5e-191 671.0 464 74.6
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 6.5e-191 671.0 464 74.6
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 6.5e-191 671.0 464 74.6
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.9e-190 669.5 434 79.0
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 5.5e-190 667.9 467 74.1
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 5.5e-190 667.9 463 73.7
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.6e-189 666.4 447 76.5
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.1e-189 666.0 494 70.6
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 2.1e-189 666.0 467 73.0
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 6.0e-189 664.5 464 73.9
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 2.3e-188 662.5 405 78.8
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 2.3e-188 662.5 462 74.5
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 5.1e-188 661.4 465 74.4
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 6.7e-188 661.0 464 73.5
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 8.7e-188 660.6 465 74.4
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.5e-187 659.8 468 74.4
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.5e-187 659.8 468 74.1
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 2.5e-187 659.1 464 72.8
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 2.5e-187 659.1 469 74.4
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.3e-187 658.7 465 73.5
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 9.6e-187 657.1 509 67.8
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.8e-186 655.6 447 76.3
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.8e-185 652.9 470 71.7
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.5e-184 649.8 468 72.9
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.0e-183 647.1 489 69.9
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.4e-182 643.3 465 71.0
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 7.9e-181 637.5 421 74.8
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.9e-179 632.9 420 75.2
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 4.3e-179 631.7 399 77.4
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 2.8e-178 629.0 444 71.8
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 2.6e-176 622.5 459 68.4
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 7.7e-176 620.9 461 69.6
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 1.6e-173 613.2 457 67.6
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 6.3e-170 601.3 415 74.7
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 8.2e-170 600.9 465 67.3
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.2e-165 587.0 456 66.9
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 2.7e-165 585.9 420 69.3
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.3e-163 578.9 399 73.9
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.5e-147 526.9 316 82.9
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.8e-146 522.7 382 72.3
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 1.2e-141 507.3 400 63.2
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 9.2e-137 491.1 411 59.6
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 5.6e-134 481.9 403 59.3
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 2.1e-117 426.8 461 52.1
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 3.4e-107 392.9 281 69.4
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.6e-101 374.0 414 51.9
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 8.4e-98 361.7 536 38.8
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.4e-97 360.9 258 74.8
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 9.3e-81 305.1 188 79.3
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 2.5e-73 280.4 265 59.2
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 2.7e-64 250.4 255 57.3
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 3.6e-64 250.0 255 57.3
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 2.9e-58 230.3 209 63.2
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.5e-46 191.4 145 67.6
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.8e-44 184.5 148 66.2
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 6.5e-42 176.0 167 61.1
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 8.8e-39 165.6 119 75.6
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 7.5e-38 162.5 123 68.3
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.1e-32 144.4 374 29.4
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 5.5e-25 119.8 60 95.0
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 7.3e-17 92.8 59 72.9
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 9.5e-17 92.4 57 80.7
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 4.7e-16 90.1 70 71.4
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 2.5e-09 67.8 65 61.5


User provided reference genes

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