Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 2.0e-214 748.8 370 100.0
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 5.8e-198 694.1 370 90.8
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 8.3e-197 690.3 370 90.0
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 2.4e-196 688.7 370 90.8
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.7e-195 685.3 370 90.5
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 4.6e-195 684.5 371 89.5
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.7e-194 682.6 377 89.4
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 3.0e-194 681.8 370 90.0
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.5e-193 679.5 370 90.0
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 2.5e-193 678.7 370 89.7
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.5e-193 678.7 370 89.7
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.5e-193 678.7 370 88.9
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 4.3e-193 677.9 370 89.5
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 4.7e-192 674.5 370 88.9
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 8.0e-192 673.7 370 88.1
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 8.0e-192 673.7 370 88.9
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 4.0e-191 671.4 370 88.1
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 8.9e-191 670.2 370 87.3
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.2e-190 669.8 370 87.6
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 2.0e-190 669.1 370 88.1
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.2e-189 665.6 370 87.3
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 3.7e-189 664.8 370 88.4
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 4.9e-189 664.5 371 87.3
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 4.9e-189 664.5 371 87.3
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 4.9e-189 664.5 386 85.8
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 6.4e-189 664.1 370 87.8
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.4e-188 662.9 370 86.2
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.9e-188 662.5 370 86.2
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.9e-188 662.5 370 86.2
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.9e-188 662.5 370 87.6
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 3.2e-188 661.8 370 86.5
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.2e-187 659.8 371 87.9
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 1.6e-187 659.4 370 85.1
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 4.6e-187 657.9 370 86.2
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 4.6e-187 657.9 370 86.2
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 6.0e-187 657.5 371 86.0
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.3e-186 656.4 371 86.0
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.3e-186 656.4 371 86.0
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 2.3e-186 655.6 371 85.4
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.9e-186 654.8 371 85.4
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.5e-185 652.9 361 88.1
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.9e-185 652.5 371 84.9
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.5e-185 652.1 371 85.2
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 4.3e-185 651.4 409 79.5
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 9.5e-185 650.2 370 85.7
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.2e-184 649.8 371 86.0
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 1.6e-184 649.4 372 86.6
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 2.8e-184 648.7 371 86.0
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 6.2e-184 647.5 371 85.7
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 6.2e-184 647.5 370 84.9
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 8.1e-184 647.1 369 85.9
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 1.1e-183 646.7 371 85.7
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.4e-183 646.4 371 84.9
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 2.3e-183 645.6 370 85.1
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 5.2e-183 644.4 372 85.8
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 5.2e-183 644.4 366 86.3
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 6.8e-183 644.0 370 84.9
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 2.6e-182 642.1 370 84.6
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 9.9e-182 640.2 371 84.1
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 9.9e-182 640.2 364 84.9
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 1.3e-181 639.8 371 83.6
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 2.9e-181 638.6 371 83.6
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 2.9e-181 638.6 350 89.1
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 8.3e-181 637.1 370 84.1
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.4e-180 635.6 373 83.4
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 3.2e-180 635.2 371 83.6
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.1e-180 634.8 384 82.8
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 5.4e-180 634.4 373 84.2
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 5.4e-180 634.4 373 83.4
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 9.2e-180 633.6 371 82.7
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.2e-179 633.3 373 83.1
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 1.6e-179 632.9 370 84.3
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.6e-179 632.9 359 85.5
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 3.5e-179 631.7 364 83.8
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 6.0e-179 630.9 370 83.2
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 6.0e-179 630.9 372 84.9
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 7.8e-179 630.6 370 83.0
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.8e-179 630.6 373 84.2
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.0e-178 630.2 362 84.0
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.3e-178 629.8 370 83.8
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.7e-178 629.4 402 78.9
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 2.3e-178 629.0 356 85.4
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 5.1e-178 627.9 364 83.2
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 8.6e-178 627.1 369 81.8
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.5e-177 626.3 362 83.4
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.5e-177 626.3 362 83.4
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.5e-177 626.3 362 83.4
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.5e-177 626.3 362 83.4
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.5e-177 626.3 362 83.4
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 1.5e-177 626.3 370 82.7
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.9e-177 625.9 373 83.4
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 2.5e-177 625.5 370 82.4
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 4.3e-177 624.8 358 85.8
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.3e-177 624.8 374 82.1
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 4.3e-177 624.8 370 83.0
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 4.3e-177 624.8 364 83.5
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 7.3e-177 624.0 367 83.1
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 7.3e-177 624.0 370 81.9
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.1e-176 622.5 397 78.6
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 3.6e-176 621.7 370 83.5
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 8.1e-176 620.5 370 80.0
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.2e-174 616.7 371 81.7
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.0e-174 615.9 351 86.0
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.4e-173 610.9 369 81.8
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 3.5e-171 605.1 370 83.0
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 3.3e-169 598.6 372 80.6
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 5.6e-169 597.8 370 77.3
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 9.6e-169 597.0 369 79.4
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 6.2e-168 594.3 369 79.7
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.8e-167 592.8 370 79.5
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 1.8e-167 592.8 360 81.1
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 2.4e-167 592.4 369 79.9
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.1e-167 592.0 370 78.6
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 9.0e-167 590.5 370 78.1
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 2.0e-166 589.3 368 81.0
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 3.4e-166 588.6 368 80.2
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.2e-165 585.9 351 80.9
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 2.4e-164 582.4 370 78.1
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 5.4e-164 581.3 351 82.6
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 9.3e-164 580.5 433 69.7
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 1.6e-163 579.7 368 78.5
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 2.1e-163 579.3 368 75.3
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.7e-162 576.2 371 77.1
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 3.0e-162 575.5 368 75.0
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 3.9e-162 575.1 371 77.1
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.5e-161 572.4 351 80.6
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.5e-161 572.4 360 79.7
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 9.6e-161 570.5 371 76.0
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.2e-158 563.5 355 77.2
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 4.5e-158 561.6 371 75.7
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 5.8e-158 561.2 367 75.2
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.3e-157 560.1 364 75.3
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 1.2e-155 553.5 365 74.0
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 1.6e-155 553.1 364 73.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 5.3e-151 538.1 362 72.4
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 9.0e-151 537.3 397 71.8
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 9.0e-151 537.3 373 74.0
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.3e-146 522.7 370 67.0
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.5e-145 520.0 370 67.3
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 6.2e-144 514.6 370 67.0
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.4e-143 513.5 369 66.9
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 9.0e-143 510.8 361 67.6
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.5e-142 510.0 372 65.9
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 9.3e-140 500.7 372 69.4
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 6.7e-138 494.6 362 66.3
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 2.5e-137 492.7 371 65.5
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.2e-136 489.6 325 75.1
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.4e-135 486.1 281 85.4
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.5e-134 483.4 279 84.2
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.0e-134 483.0 277 85.6
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 4.5e-134 481.9 288 81.9
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 5.9e-134 481.5 280 82.9
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 2.2e-133 479.6 367 64.0
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.9e-133 479.2 283 81.3
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.0e-130 470.7 364 68.4
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 8.8e-130 467.6 358 65.1
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 4.3e-129 465.3 278 82.7
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 7.7e-126 454.5 327 70.0
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 2.7e-123 446.0 388 58.0
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 8.5e-117 424.5 275 78.2
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 1.9e-116 423.3 239 85.4
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.6e-115 420.2 366 54.9
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.3e-112 410.6 274 73.4
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 3.1e-111 406.0 273 72.2
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 9.1e-111 404.4 402 52.0
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 2.1e-107 393.3 370 53.5
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.3e-98 363.2 198 89.9
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 7.5e-89 331.6 273 64.1
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.8e-87 327.0 200 80.5
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.2e-87 326.2 197 80.2
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 3.9e-85 319.3 177 86.4
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 3.6e-75 286.2 171 83.6
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 6.2e-59 232.3 268 53.7
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 9.0e-50 201.8 378 33.3
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 9.3e-47 191.8 453 29.4
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.0e-45 188.3 113 85.0
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 2.4e-39 167.2 410 28.0
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 3.2e-39 166.8 120 66.7
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 9.3e-39 165.2 148 59.5
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 7.9e-38 162.2 120 65.0
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 1.4e-34 151.4 297 31.3
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 1.7e-32 144.4 115 63.5
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 8.4e-32 142.1 84 79.8
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 4.5e-09 66.6 49 71.4
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 1.1e-07 62.0 189 30.7


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