Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa027290 Carpinus fangiana HOM05D004329 ORTHO05D121551 0.0e+00 1191.0 667 100.0
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 2.3e-19 101.7 636 24.2
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 2.3e-19 101.7 641 24.2
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 3.0e-19 101.3 629 24.8
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 5.6e-18 97.1 629 24.6
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 9.6e-18 96.3 634 24.9
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 9.6e-18 96.3 629 24.3
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 9.6e-18 96.3 629 24.8
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 9.6e-18 96.3 637 23.5
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 2.1e-17 95.1 641 24.0
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 2.8e-17 94.7 635 23.6
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 2.8e-17 94.7 635 24.4
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 3.6e-17 94.4 635 24.3
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 3.6e-17 94.4 635 24.4
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 6.2e-17 93.6 628 23.7
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 8.1e-17 93.2 633 22.9
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 1.1e-16 92.8 641 24.0
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 1.1e-16 92.8 641 24.0
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 1.4e-16 92.4 488 25.6
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 1.4e-16 92.4 636 24.4
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 1.4e-16 92.4 641 24.2
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 1.8e-16 92.0 641 23.9
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 1.8e-16 92.0 644 23.3
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 2.4e-16 91.7 630 24.0
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 3.1e-16 91.3 626 23.6
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 3.1e-16 91.3 634 23.7
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 3.1e-16 91.3 628 23.6
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 3.1e-16 91.3 641 23.7
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 4.0e-16 90.9 624 24.5
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 4.0e-16 90.9 648 23.0
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 4.0e-16 90.9 630 22.7
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 4.0e-16 90.9 639 23.9
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 5.2e-16 90.5 624 24.5
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 6.9e-16 90.1 630 23.8
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 6.9e-16 90.1 629 23.7
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 6.9e-16 90.1 629 22.9
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 6.9e-16 90.1 635 23.0
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 6.9e-16 90.1 629 24.2
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 8.9e-16 89.7 639 24.1
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 1.2e-15 89.4 639 23.6
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.2e-15 89.4 640 23.3
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 1.2e-15 89.4 632 23.7
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 1.5e-15 89.0 627 23.4
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 2.0e-15 88.6 638 23.7
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 2.0e-15 88.6 641 23.9
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 2.6e-15 88.2 619 24.4
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 2.6e-15 88.2 619 24.4
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 2.6e-15 88.2 619 24.4
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 3.4e-15 87.8 640 23.0
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 4.4e-15 87.4 629 23.2
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 4.4e-15 87.4 638 22.9
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 5.8e-15 87.0 630 22.5
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 5.8e-15 87.0 635 23.5
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 7.6e-15 86.7 624 23.4
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 7.6e-15 86.7 620 24.0
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 9.9e-15 86.3 624 24.0
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 9.9e-15 86.3 642 22.9
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 9.9e-15 86.3 636 23.1
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 1.3e-14 85.9 488 25.8
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 1.3e-14 85.9 487 25.5
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.3e-14 85.9 623 22.8
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.3e-14 85.9 487 25.5
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 1.7e-14 85.5 640 23.4
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 1.7e-14 85.5 636 24.1
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 2.2e-14 85.1 624 23.6
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 2.2e-14 85.1 488 25.8
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 2.2e-14 85.1 490 25.5
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 2.9e-14 84.7 638 22.7
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 2.9e-14 84.7 627 23.3
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 3.8e-14 84.3 632 22.9
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 3.8e-14 84.3 635 22.7
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 3.8e-14 84.3 641 24.0
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 3.8e-14 84.3 630 24.1
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 4.9e-14 84.0 636 23.3
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 6.4e-14 83.6 638 22.7
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 6.4e-14 83.6 657 23.7
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 8.4e-14 83.2 631 23.1
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 8.4e-14 83.2 634 22.1
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 8.4e-14 83.2 650 22.3
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 8.4e-14 83.2 638 22.4
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 1.1e-13 82.8 630 22.7
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.9e-13 82.0 643 23.5
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.9e-13 82.0 653 22.8
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 1.9e-13 82.0 634 23.3
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 4.2e-13 80.9 487 26.3
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 5.4e-13 80.5 644 23.9
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 5.4e-13 80.5 628 23.6
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 7.1e-13 80.1 583 23.7
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 1.2e-12 79.3 627 22.6
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 1.2e-12 79.3 641 23.1
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 1.2e-12 79.3 607 22.9
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 1.6e-12 79.0 644 22.2
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 2.1e-12 78.6 689 23.4
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 2.1e-12 78.6 635 22.5
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 2.1e-12 78.6 626 22.7
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 2.7e-12 78.2 604 23.3
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 3.5e-12 77.8 641 23.2
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 4.6e-12 77.4 578 22.5
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 4.6e-12 77.4 626 23.5
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 4.6e-12 77.4 486 25.7
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 6.0e-12 77.0 635 22.4
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 7.8e-12 76.6 657 23.3
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 7.8e-12 76.6 641 23.1
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 1.0e-11 76.3 629 22.6
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 1.3e-11 75.9 634 22.4
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 1.7e-11 75.5 635 23.0
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 2.3e-11 75.1 481 23.9
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 5.1e-11 73.9 481 23.7
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 8.7e-11 73.2 677 22.2
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 2.5e-10 71.6 505 24.6
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 5.6e-10 70.5 590 22.0
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 2.1e-09 68.6 279 27.2
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 2.8e-09 68.2 636 23.4
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 6.2e-09 67.0 625 22.1
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 8.1e-09 66.6 391 22.5
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 1.4e-08 65.9 618 22.2
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 3.1e-08 64.7 541 23.3
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 3.4e-07 61.2 217 27.2
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 5.8e-07 60.5 199 27.1
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 1.7e-06 58.9 328 23.5


User provided reference genes

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