Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026589 Carpinus fangiana HOM05D004380 ORTHO05D005134 6.6e-63 243.8 119 100.0
Lsat_1_v5_gn_6_63641 Lactuca sativa HOM05D004380 ORTHO05D005134 1.1e-14 83.6 135 38.5
MD16G1006500 Malus domestica HOM05D004380 ORTHO05D005134 1.1e-14 83.6 137 38.7
Solyc03g033950.4 Solanum lycopersicum HOM05D004380 ORTHO05D005134 1.1e-14 83.6 138 37.7
Sopen03g006700 Solanum pennellii HOM05D004380 ORTHO05D005134 1.5e-14 83.2 138 37.7
PGSC0003DMG400022576 Solanum tuberosum HOM05D004380 ORTHO05D005134 1.5e-14 83.2 138 37.7
Cc01_g02120 Coffea canephora HOM05D004380 ORTHO05D005134 2.0e-14 82.8 139 36.7
CAN.G1336.5 Capsicum annuum HOM05D004380 ORTHO05D005134 2.5e-14 82.4 139 37.4
Lj6C290G5 Lonicera japonica HOM05D004380 ORTHO05D005134 3.3e-14 82.0 137 38.0
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 7.4e-14 80.9 139 36.0
GSVIVG01013206001 Vitis vinifera HOM05D004380 ORTHO05D005134 7.4e-14 80.9 137 37.2
THA.LOC104814403 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 9.7e-14 80.5 139 36.0
TWI81G0890 Tripterygium wilfordii HOM05D004380 ORTHO05D005134 9.7e-14 80.5 139 35.3
ECA233G1538 Erigeron canadensis HOM05D004380 ORTHO05D005134 1.3e-13 80.1 137 37.2
Gohir.A11G262400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 1.3e-13 80.1 139 36.7
Sp1g27590 Schrenkiella parvula HOM05D004380 ORTHO05D005134 1.3e-13 80.1 139 34.5
SGA_v2.0_scaffold86G26890 Striga asiatica HOM05D004380 ORTHO05D005134 1.3e-13 80.1 139 35.3
Thecc.05G299600 Theobroma cacao HOM05D004380 ORTHO05D005134 1.3e-13 80.1 139 36.7
BcaB03g13784 Brassica carinata HOM05D004380 ORTHO05D005134 2.2e-13 79.3 139 34.5
Migut.J01084 Erythranthe guttata HOM05D004380 ORTHO05D005134 2.2e-13 79.3 139 35.3
Manes.15G172200 Manihot esculenta HOM05D004380 ORTHO05D005134 2.2e-13 79.3 139 36.0
DCAR_015696 Daucus carota HOM05D004380 ORTHO05D005134 2.8e-13 79.0 137 36.5
Gorai.007G293700 Gossypium raimondii HOM05D004380 ORTHO05D005134 2.8e-13 79.0 139 36.7
RcHm_v2.0_Chr4g0446311 Rosa chinensis HOM05D004380 ORTHO05D005134 2.8e-13 79.0 137 35.8
CAN.G1823.5 Capsicum annuum HOM05D004380 ORTHO05D005134 3.7e-13 78.6 139 36.0
Atru.chr1.3775 Acer truncatum HOM05D004380 ORTHO05D005134 4.8e-13 78.2 139 34.5
Actinidia10879 Actinidia chinensis HOM05D004380 ORTHO05D005134 4.8e-13 78.2 139 36.0
Cfa012380 Carpinus fangiana HOM05D004380 ORTHO05D005134 4.8e-13 78.2 139 36.0
Hma1.2p1_0311F.1_g121260 Hydrangea macrophylla HOM05D004380 ORTHO05D005134 6.3e-13 77.8 139 34.5
Mapoly0062s0011 Marchantia polymorpha HOM05D004380 ORTHO05D005134 6.3e-13 77.8 139 36.0
Potri.003G087200 Populus trichocarpa HOM05D004380 ORTHO05D005134 8.2e-13 77.4 139 36.7
TPR.G23111 Trifolium pratense HOM05D004380 ORTHO05D005134 8.2e-13 77.4 139 36.0
Aqoxy3G00393 Aquilegia oxysepala HOM05D004380 ORTHO05D005134 1.1e-12 77.0 139 34.5
BcaC05g27949 Brassica carinata HOM05D004380 ORTHO05D005134 1.1e-12 77.0 139 34.5
A05p25450 Brassica napus HOM05D004380 ORTHO05D005134 1.1e-12 77.0 137 35.0
C05p39530 Brassica napus HOM05D004380 ORTHO05D005134 1.1e-12 77.0 139 34.5
BolC5t32694H Brassica oleracea HOM05D004380 ORTHO05D005134 1.1e-12 77.0 139 34.5
BraA05t21429Z Brassica rapa HOM05D004380 ORTHO05D005134 1.1e-12 77.0 137 35.0
CiPaw.11G087400 Carya illinoinensis HOM05D004380 ORTHO05D005134 1.4e-12 76.6 139 35.3
FAN22G0510 Fragaria x ananassa HOM05D004380 ORTHO05D005134 1.4e-12 76.6 137 34.3
Os08g0178300 Oryza sativa ssp. japonica HOM05D004380 ORTHO05D005134 1.4e-12 76.6 137 34.3
TAR629G2821 Trochodendron aralioides HOM05D004380 ORTHO05D005134 1.4e-12 76.6 115 39.1
CBR_g26347 Chara braunii HOM05D004380 ORTHO05D005134 1.8e-12 76.3 145 33.8
COL.COLO4_13527 Corchorus olitorius HOM05D004380 ORTHO05D005134 1.8e-12 76.3 139 36.0
DCAR_007574 Daucus carota HOM05D004380 ORTHO05D005134 1.8e-12 76.3 138 36.2
HPP92_020120 Vanilla planifolia HOM05D004380 ORTHO05D005134 1.8e-12 76.3 145 34.5
HPP92_020130 Vanilla planifolia HOM05D004380 ORTHO05D005134 1.8e-12 76.3 145 34.5
ClCG03G011240 Citrullus lanatus HOM05D004380 ORTHO05D005134 2.4e-12 75.9 139 34.5
Carub.0001s3020 Capsella rubella HOM05D004380 ORTHO05D005134 3.1e-12 75.5 137 36.5
Cpa.g.sc69.32 Carica papaya HOM05D004380 ORTHO05D005134 3.1e-12 75.5 139 35.3
Cpa.g.sc69.34 Carica papaya HOM05D004380 ORTHO05D005134 3.1e-12 75.5 133 37.6
CsaV3_2G035720 Cucumis sativus L. HOM05D004380 ORTHO05D005134 3.1e-12 75.5 139 33.8
HanXRQChr16g0500491 Helianthus annuus HOM05D004380 ORTHO05D005134 3.1e-12 75.5 137 35.8
Sabra03G0056900 Salix brachista HOM05D004380 ORTHO05D005134 3.1e-12 75.5 133 38.3
Sed0018208 Sechium edule HOM05D004380 ORTHO05D005134 3.1e-12 75.5 139 34.5
vmacro14143 Vaccinium macrocarpon HOM05D004380 ORTHO05D005134 3.1e-12 75.5 139 35.3
Nn6g33684 Nelumbo nucifera HOM05D004380 ORTHO05D005134 4.1e-12 75.1 139 33.1
Dinv25182 Davidia involucrata HOM05D004380 ORTHO05D005134 5.3e-12 74.7 139 33.8
FAN17G2609 Fragaria x ananassa HOM05D004380 ORTHO05D005134 5.3e-12 74.7 137 34.3
Rhsim07G0121900 Rhododendron simsii HOM05D004380 ORTHO05D005134 5.3e-12 74.7 139 34.5
Actinidia31472 Actinidia chinensis HOM05D004380 ORTHO05D005134 6.9e-12 74.3 139 34.5
FvH4_4g36560 Fragaria vesca HOM05D004380 ORTHO05D005134 6.9e-12 74.3 137 34.3
FAN12G0331 Fragaria x ananassa HOM05D004380 ORTHO05D005134 6.9e-12 74.3 137 34.3
Glyma.07G070900 Glycine max HOM05D004380 ORTHO05D005134 6.9e-12 74.3 115 39.1
CDE11G0710 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 9.1e-12 73.9 139 35.3
Aa31LG9G15640 Aethionema arabicum HOM05D004380 ORTHO05D005134 1.2e-11 73.6 138 34.8
Gohir.D11G272400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 1.2e-11 73.6 115 39.1
arahy.Tifrunner.gnm1.ann1.522STQ Arachis hypogaea HOM05D004380 ORTHO05D005134 1.5e-11 73.2 115 39.1
Ciclev10033653m.g Citrus clementina HOM05D004380 ORTHO05D005134 1.5e-11 73.2 113 37.2
HanXRQChr12g0372541 Helianthus annuus HOM05D004380 ORTHO05D005134 1.5e-11 73.2 137 35.0
SMO118G0163 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 1.5e-11 73.2 121 37.2
Duzib128G0331 Durio zibethinus HOM05D004380 ORTHO05D005134 2.0e-11 72.8 115 39.1
Prupe.8G202500 Prunus persica HOM05D004380 ORTHO05D005134 2.0e-11 72.8 113 38.9
CDE02G1296 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 2.6e-11 72.4 115 38.3
Pp3c3_10050 Physcomitrium patens HOM05D004380 ORTHO05D005134 2.6e-11 72.4 137 35.0
Psat4g154840 Pisum sativum HOM05D004380 ORTHO05D005134 2.6e-11 72.4 115 38.3
TPR.G20578 Trifolium pratense HOM05D004380 ORTHO05D005134 2.6e-11 72.4 111 39.6
arahy.Tifrunner.gnm1.ann1.MH0ZUI Arachis hypogaea HOM05D004380 ORTHO05D005134 3.4e-11 72.0 114 39.5
Lj3g0000626 Lotus japonicus HOM05D004380 ORTHO05D005134 3.4e-11 72.0 115 38.3
Lalb_Chr04g0258181 Lupinus albus HOM05D004380 ORTHO05D005134 3.4e-11 72.0 115 37.4
PSO063G6462 Papaver somniferum HOM05D004380 ORTHO05D005134 3.4e-11 72.0 137 32.8
PSO782G4920 Papaver somniferum HOM05D004380 ORTHO05D005134 3.4e-11 72.0 137 32.8
PSO832G0693 Papaver somniferum HOM05D004380 ORTHO05D005134 3.4e-11 72.0 137 32.8
VMungo0331G0855 Vigna mungo HOM05D004380 ORTHO05D005134 3.4e-11 72.0 115 38.3
FAN07G2732 Fragaria x ananassa HOM05D004380 ORTHO05D005134 4.5e-11 71.6 137 32.8
QL03p017813 Quercus lobata HOM05D004380 ORTHO05D005134 5.9e-11 71.2 137 35.0
CANSAT21G1629 Cannabis sativa HOM05D004380 ORTHO05D005134 7.7e-11 70.9 113 36.3
Medtr8g030840 Medicago truncatula HOM05D004380 ORTHO05D005134 7.7e-11 70.9 115 36.5
Hund11501 Selenicereus undatus HOM05D004380 ORTHO05D005134 7.7e-11 70.9 139 33.1
Aa31LG9G6660 Aethionema arabicum HOM05D004380 ORTHO05D005134 1.0e-10 70.5 137 34.3
Phvul.010G098800 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 1.0e-10 70.5 115 38.3
Ah.09g224390 Amaranthus hybridus HOM05D004380 ORTHO05D005134 1.3e-10 70.1 139 31.7
arahy.Tifrunner.gnm1.ann1.ARJY2C Arachis hypogaea HOM05D004380 ORTHO05D005134 1.3e-10 70.1 123 37.4
Thhalv10007193m.g Eutrema salsugineum HOM05D004380 ORTHO05D005134 1.3e-10 70.1 140 32.9
AL1G45970 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 2.2e-10 69.3 137 33.6
EL10Ac4g09041 Beta vulgaris HOM05D004380 ORTHO05D005134 2.9e-10 68.9 139 31.7
Peaxi162Scf01164g00006 Petunia axillaris HOM05D004380 ORTHO05D005134 3.8e-10 68.6 139 33.8
Sed0024296 Sechium edule HOM05D004380 ORTHO05D005134 3.8e-10 68.6 139 31.7
Phvul.011G076400 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 5.0e-10 68.2 115 37.4
CARHR031210 Cardamine hirsuta HOM05D004380 ORTHO05D005134 8.5e-10 67.4 138 31.2
SMO144G0180 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 8.5e-10 67.4 137 32.8
AT1G31870 Arabidopsis thaliana HOM05D004380 ORTHO05D005134 1.1e-09 67.0 137 32.8
Haze_08305 Corylus avellana HOM05D004380 ORTHO05D005134 1.1e-09 67.0 108 39.8
Nitab4.5_0008421g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 1.1e-09 67.0 48 58.3
ATR0665G406 Amborella trichopoda HOM05D004380 ORTHO05D005134 1.9e-09 66.2 139 33.1
CAN.G248.21 Capsicum annuum HOM05D004380 ORTHO05D005134 1.9e-09 66.2 114 35.1
Oeu045705.2 Olea europaea HOM05D004380 ORTHO05D005134 4.2e-09 65.1 137 33.6
CiPaw.04G096200 Carya illinoinensis HOM05D004380 ORTHO05D005134 3.6e-08 62.0 111 37.8
AagrBONN_evm.TU.Sc2ySwM_117.3835 Anthoceros agrestis HOM05D004380 ORTHO05D005134 4.7e-08 61.6 136 30.9
unitig_21.g20505 Utricularia gibba HOM05D004380 ORTHO05D005134 4.7e-08 61.6 107 36.4
arahy.Tifrunner.gnm1.ann1.45D7QY Arachis hypogaea HOM05D004380 ORTHO05D005134 1.8e-07 59.7 86 43.0
AUR62007222 Chenopodium quinoa HOM05D004380 ORTHO05D005134 1.8e-07 59.7 46 52.2
Nitab4.5_0005084g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 1.8e-07 59.7 133 32.3
MCO15G532 Micromonas commoda HOM05D004380 ORTHO05D005134 4.4e-06 55.1 144 30.6
CARHR062710 Cardamine hirsuta HOM05D004380 ORTHO05D005134 5.7e-06 54.7 131 29.8
SEGI_39298 Sequoiadendron giganteum HOM05D004380 ORTHO05D005134 7.4e-06 54.3 110 34.5


User provided reference genes

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