Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026563 Carpinus fangiana HOM05D002151 ORTHO05D124920 0.0e+00 1721.8 882 100.0
AagrBONN_evm.TU.Sc2ySwM_368.996 Anthoceros agrestis HOM05D002151 ORTHO05D002142 7.1e-29 133.7 510 25.9
AagrBONN_evm.TU.Sc2ySwM_228.4786 Anthoceros agrestis HOM05D002151 ORTHO05D002142 2.5e-26 125.2 513 24.6
CBR_g48299 Chara braunii HOM05D002151 ORTHO05D002142 1.3e-25 122.9 217 35.5
SEGI_17208 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 3.7e-25 121.3 503 24.9
CBR_g19013 Chara braunii HOM05D002151 ORTHO05D002142 1.1e-24 119.8 200 35.5
AagrBONN_evm.TU.Sc2ySwM_368.2530 Anthoceros agrestis HOM05D002151 ORTHO05D002142 7.7e-23 113.6 552 25.7
SMO361G0126 Selaginella moellendorffii HOM05D002151 ORTHO05D002142 1.1e-21 109.8 198 34.3
SMO199G0127 Selaginella moellendorffii HOM05D002151 ORTHO05D002142 1.9e-21 109.0 198 33.3
SMO172G0137 Selaginella moellendorffii HOM05D002151 ORTHO05D002142 4.2e-21 107.8 212 32.5
SEGI_15307 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 4.2e-21 107.8 558 24.4
SEGI_41407 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 9.4e-21 106.7 513 24.6
SEGI_18377 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 1.2e-20 106.3 566 23.3
SEGI_19139 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 2.7e-20 105.1 560 23.6
SMO199G0069 Selaginella moellendorffii HOM05D002151 ORTHO05D002142 6.1e-20 104.0 198 33.3
SMO361G0223 Selaginella moellendorffii HOM05D002151 ORTHO05D002142 7.9e-20 103.6 199 33.2
CBR_g23076 Chara braunii HOM05D002151 ORTHO05D002142 1.0e-19 103.2 212 31.6
CBR_g31865 Chara braunii HOM05D002151 ORTHO05D002142 2.3e-19 102.1 614 23.5
Mapoly0009s0076 Marchantia polymorpha HOM05D002151 ORTHO05D002142 2.8e-17 95.1 210 29.0
SMO134G0221 Selaginella moellendorffii HOM05D002151 ORTHO05D002142 3.1e-16 91.7 206 31.6
Cpa.g.sc115.37 Carica papaya HOM05D002151 ORTHO05D002142 9.4e-13 80.1 223 26.9
DCAR_008747 Daucus carota HOM05D002151 ORTHO05D002142 4.7e-12 77.8 213 26.3
Oeu011824.2 Olea europaea HOM05D002151 ORTHO05D002142 1.0e-11 76.6 197 26.9
unitig_578.g16735 Utricularia gibba HOM05D002151 ORTHO05D002142 1.8e-11 75.9 208 26.0
Migut.L01907 Erythranthe guttata HOM05D002151 ORTHO05D002142 3.9e-11 74.7 318 23.3
arahy.Tifrunner.gnm1.ann1.1U5WXB Arachis hypogaea HOM05D002151 ORTHO05D002142 5.1e-11 74.3 211 25.6
Nitab4.5_0000053g0070 Nicotiana tabacum HOM05D002151 ORTHO05D002142 5.1e-11 74.3 205 26.8
Oeu028843.1 Olea europaea HOM05D002151 ORTHO05D002142 6.7e-11 73.9 211 24.6
CDE05G3563 Ceratophyllum demersum HOM05D002151 ORTHO05D002142 8.8e-11 73.6 212 25.5
arahy.Tifrunner.gnm1.ann1.8E646I Arachis hypogaea HOM05D002151 ORTHO05D002142 1.1e-10 73.2 211 25.6
PGR044G2759 Punica granatum HOM05D002151 ORTHO05D002142 2.0e-10 72.4 213 25.8
arahy.Tifrunner.gnm1.ann1.FSEI5V Arachis hypogaea HOM05D002151 ORTHO05D002142 2.6e-10 72.0 211 25.1
Lalb_Chr24g0393761 Lupinus albus HOM05D002151 ORTHO05D002142 2.6e-10 72.0 214 25.7
Os02g0175000 Oryza sativa ssp. japonica HOM05D002151 ORTHO05D002142 2.6e-10 72.0 223 26.0
Carub.0006s2888 Capsella rubella HOM05D002151 ORTHO05D002142 3.3e-10 71.6 209 24.4
HanXRQChr14g0437461 Helianthus annuus HOM05D002151 ORTHO05D002142 3.3e-10 71.6 213 24.9
TWI34G0673 Tripterygium wilfordii HOM05D002151 ORTHO05D002142 3.3e-10 71.6 215 27.4
Carub.0006s2889 Capsella rubella HOM05D002151 ORTHO05D002142 4.4e-10 71.2 209 24.4
CAN.G388.58 Capsicum annuum HOM05D002151 ORTHO05D002142 4.4e-10 71.2 210 24.8
MBI13_g31556_MAGBIO Magnolia biondii HOM05D002151 ORTHO05D002142 4.4e-10 71.2 213 24.4
arahy.Tifrunner.gnm1.ann1.CL8ITS Arachis hypogaea HOM05D002151 ORTHO05D002142 5.7e-10 70.9 211 24.6
BcaC04g21028 Brassica carinata HOM05D002151 ORTHO05D002142 7.4e-10 70.5 207 25.1
C09p36490 Brassica napus HOM05D002151 ORTHO05D002142 7.4e-10 70.5 207 25.1
BolC9t56484H Brassica oleracea HOM05D002151 ORTHO05D002142 7.4e-10 70.5 207 25.1
Cc10_g11530 Coffea canephora HOM05D002151 ORTHO05D002142 2.2e-09 68.9 287 23.7
Lsat_1_v5_gn_7_59581 Lactuca sativa HOM05D002151 ORTHO05D002142 2.2e-09 68.9 218 27.1
TAR383G0272 Trochodendron aralioides HOM05D002151 ORTHO05D002142 2.8e-09 68.6 213 23.9
Carub.0006s2890 Capsella rubella HOM05D002151 ORTHO05D002142 4.8e-09 67.8 209 22.5
Eucgr.C02202 Eucalyptus grandis HOM05D002151 ORTHO05D002142 4.8e-09 67.8 222 21.6
BraA09t38435Z Brassica rapa HOM05D002151 ORTHO05D002142 6.3e-09 67.4 207 24.2
Nitab4.5_0001572g0040 Nicotiana tabacum HOM05D002151 ORTHO05D002142 6.3e-09 67.4 213 23.9
TWI32G0942 Tripterygium wilfordii HOM05D002151 ORTHO05D002142 6.3e-09 67.4 212 25.0
Lalb_Chr14g0375381 Lupinus albus HOM05D002151 ORTHO05D002142 8.2e-09 67.0 212 23.1
Nitab4.5_0000413g0210 Nicotiana tabacum HOM05D002151 ORTHO05D002142 8.2e-09 67.0 213 23.9
Lj2g0004014 Lotus japonicus HOM05D002151 ORTHO05D002142 1.1e-08 66.6 213 24.4
BcaB01g01466 Brassica carinata HOM05D002151 ORTHO05D002142 1.4e-08 66.2 207 23.7
A09p28750 Brassica napus HOM05D002151 ORTHO05D002142 1.4e-08 66.2 207 23.7
SEGI_27152 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 1.4e-08 66.2 492 23.8
Sc18g0007570 Simmondsia chinensis HOM05D002151 ORTHO05D002142 1.4e-08 66.2 210 22.4
AL6G44160 Arabidopsis lyrata HOM05D002151 ORTHO05D002142 1.8e-08 65.9 219 23.3
SGA_v2.0_scaffold21G09629 Striga asiatica HOM05D002151 ORTHO05D002142 1.8e-08 65.9 208 25.0
AT4G10310 Arabidopsis thaliana HOM05D002151 ORTHO05D002142 2.4e-08 65.5 209 23.4
HPP92_000242 Vanilla planifolia HOM05D002151 ORTHO05D002142 2.4e-08 65.5 211 23.7
Cpa.g.sc21.236 Carica papaya HOM05D002151 ORTHO05D002142 5.3e-08 64.3 217 24.0
Carub.0006s2891 Capsella rubella HOM05D002151 ORTHO05D002142 7.0e-08 63.9 209 24.4
Hma1.2p1_0314F.1_g121920 Hydrangea macrophylla HOM05D002151 ORTHO05D002142 7.0e-08 63.9 213 21.6
Gohir.A08G081700 Gossypium hirsutum HOM05D002151 ORTHO05D002142 9.1e-08 63.5 213 23.5
Peaxi162Scf00320g00716 Petunia axillaris HOM05D002151 ORTHO05D002142 9.1e-08 63.5 213 23.5
SalBow5G5420 Salvia bowleyana HOM05D002151 ORTHO05D002142 9.1e-08 63.5 240 26.2
BcaC01g04681 Brassica carinata HOM05D002151 ORTHO05D002142 1.2e-07 63.2 239 22.2
C03p34980 Brassica napus HOM05D002151 ORTHO05D002142 1.2e-07 63.2 239 22.2
Dinv26462 Davidia involucrata HOM05D002151 ORTHO05D002142 1.2e-07 63.2 213 24.4
HanXRQChr03g0067361 Helianthus annuus HOM05D002151 ORTHO05D002142 1.2e-07 63.2 213 23.9
Nn8g41027 Nelumbo nucifera HOM05D002151 ORTHO05D002142 1.2e-07 63.2 212 23.1
BolC3t15809H Brassica oleracea HOM05D002151 ORTHO05D002142 1.5e-07 62.8 239 22.2
HPP92_000194 Vanilla planifolia HOM05D002151 ORTHO05D002142 1.5e-07 62.8 211 23.7
Aqoxy7G02707 Aquilegia oxysepala HOM05D002151 ORTHO05D002142 2.0e-07 62.4 213 23.5
BcaC03g16406 Brassica carinata HOM05D002151 ORTHO05D002142 2.0e-07 62.4 201 24.4
C02p42370 Brassica napus HOM05D002151 ORTHO05D002142 2.0e-07 62.4 201 24.4
CSS0030156 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 2.0e-07 62.4 213 21.6
BcaB01g02755 Brassica carinata HOM05D002151 ORTHO05D002142 2.6e-07 62.0 210 23.3
A02p26670 Brassica napus HOM05D002151 ORTHO05D002142 2.6e-07 62.0 201 24.4
BolC2t10279H Brassica oleracea HOM05D002151 ORTHO05D002142 2.6e-07 62.0 201 24.4
BraA02t07671Z Brassica rapa HOM05D002151 ORTHO05D002142 2.6e-07 62.0 201 24.4
Nn8g41025 Nelumbo nucifera HOM05D002151 ORTHO05D002142 2.6e-07 62.0 230 23.0
Sabra18G0111900 Salix brachista HOM05D002151 ORTHO05D002142 2.6e-07 62.0 211 23.7
Nitab4.5_0000053g0100 Nicotiana tabacum HOM05D002151 ORTHO05D002142 3.5e-07 61.6 209 24.4
Sopen07g005580 Solanum pennellii HOM05D002151 ORTHO05D002142 3.5e-07 61.6 210 24.3
THA.LOC104815619 Tarenaya hassleriana HOM05D002151 ORTHO05D002142 3.5e-07 61.6 210 22.4
Eucgr.F02866 Eucalyptus grandis HOM05D002151 ORTHO05D002142 4.5e-07 61.2 229 22.3
Os06g0701700 Oryza sativa ssp. japonica HOM05D002151 ORTHO05D002142 5.9e-07 60.8 193 27.5
RcHm_v2.0_Chr4g0398151 Rosa chinensis HOM05D002151 ORTHO05D002142 5.9e-07 60.8 213 22.5
SEGI_04475 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 5.9e-07 60.8 113 34.5
A03p28940 Brassica napus HOM05D002151 ORTHO05D002142 7.7e-07 60.5 239 21.8
BraA03t12092Z Brassica rapa HOM05D002151 ORTHO05D002142 7.7e-07 60.5 239 21.8
Gohir.D08G091000 Gossypium hirsutum HOM05D002151 ORTHO05D002142 1.0e-06 60.1 213 22.5
Phvul.004G177200 Phaseolus vulgaris HOM05D002151 ORTHO05D002142 1.0e-06 60.1 265 23.0
PGSC0003DMG400029966 Solanum tuberosum HOM05D002151 ORTHO05D002142 1.0e-06 60.1 210 24.3
Gorai.004G096400 Gossypium raimondii HOM05D002151 ORTHO05D002142 1.3e-06 59.7 213 22.5
MD16G1240400 Malus domestica HOM05D002151 ORTHO05D002142 1.3e-06 59.7 212 22.6
CSS0002509 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 1.7e-06 59.3 203 21.2
Thhalv10028767m.g Eutrema salsugineum HOM05D002151 ORTHO05D002142 1.7e-06 59.3 210 23.8
Medtr6g092820 Medicago truncatula HOM05D002151 ORTHO05D002142 1.7e-06 59.3 212 23.1
TAR383G0196 Trochodendron aralioides HOM05D002151 ORTHO05D002142 1.7e-06 59.3 211 22.3
CARHR256360 Cardamine hirsuta HOM05D002151 ORTHO05D002142 2.2e-06 58.9 213 23.0
SEGI_05489 Sequoiadendron giganteum HOM05D002151 ORTHO05D002142 2.2e-06 58.9 496 22.2
PSO063G3991 Papaver somniferum HOM05D002151 ORTHO05D002142 2.9e-06 58.5 214 21.5
SalBow6G2778 Salvia bowleyana HOM05D002151 ORTHO05D002142 2.9e-06 58.5 118 31.4
Prupe.1G067100 Prunus persica HOM05D002151 ORTHO05D002142 5.0e-06 57.8 213 21.1
Rhsim01G0112700 Rhododendron simsii HOM05D002151 ORTHO05D002142 5.0e-06 57.8 254 21.3
Sp6g07120 Schrenkiella parvula HOM05D002151 ORTHO05D002142 5.0e-06 57.8 210 23.3
BcaB05g23910 Brassica carinata HOM05D002151 ORTHO05D002142 8.5e-06 57.0 208 23.6
BcaC04g21025 Brassica carinata HOM05D002151 ORTHO05D002142 8.5e-06 57.0 211 23.7
CARHR256320 Cardamine hirsuta HOM05D002151 ORTHO05D002142 8.5e-06 57.0 209 22.5
COL.COLO4_05886 Corchorus olitorius HOM05D002151 ORTHO05D002142 8.5e-06 57.0 213 21.6


User provided reference genes

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