Gene: COL.COLO4_05886
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_05886
- Transcript Identifier COL.rna4707
- Gene Type Coding gene
- Location AWUE01012501.1 : 18943-23494 : negative
Gene Family Information
- ID HOM05D002151
- #Genes/#Species 312/94
- Phylogenetic origin
- ID ORTHO05D002142
- #Genes/#Species 313/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna4707
- GenBank OMP09025.1
- id gene5858
- gene_name COLO4_05886
- uniprot A0A1R3KPK6
Descriptions
- Description Cation transporter
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Solyc07g014690.3 |
| GO:0009735 | ISO | PLAZA Integrative Orthology | response to cytokinin | Solyc07g014690.3 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT4G10310 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT4G10310 |
| GO:0006814 | ISO | PLAZA Integrative Orthology | sodium ion transport | AT4G10310 |
| GO:0006813 | ISO | PLAZA Integrative Orthology | potassium ion transport | AT4G10310 |
| GO:0098655 | IEA | GOA Database | cation transmembrane transport | |
| GO:0006812 | IEA | GOA Database | cation transport | |
| GO:0006812 | IEA | InterPro | cation transport | |
| GO:0006811 | IEA | GOA Database | ion transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015081 | ISO | PLAZA Integrative Orthology | sodium ion transmembrane transporter activity | AT4G10310 |
| GO:0008324 | IEA | GOA Database | cation transmembrane transporter activity | |
| GO:0008324 | IEA | InterPro | cation transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G10310 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003445 | Cation transporter |
| Mapman id | Description |
|---|---|
| 24.2.19 | Solute transport.carrier-mediated transport.potassium/sodium cation transporter (HKT) |