Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026542 Carpinus fangiana HOM05D005537 ORTHO05D124841 1.5e-133 479.6 245 100.0
arahy.Tifrunner.gnm1.ann1.W452X0 Arachis hypogaea HOM05D005537 ORTHO05D006776 3.5e-10 69.7 129 36.4
arahy.Tifrunner.gnm1.ann1.HQKU7C Arachis hypogaea HOM05D005537 ORTHO05D006776 1.0e-09 68.2 129 35.7
Lj2g0020928 Lotus japonicus HOM05D005537 ORTHO05D006776 3.9e-09 66.2 108 41.7
TPR.G37121 Trifolium pratense HOM05D005537 ORTHO05D006776 7.3e-08 62.0 144 34.0
SMO012G0033 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 1.6e-07 60.8 123 34.1
Psat4g004960 Pisum sativum HOM05D005537 ORTHO05D006776 2.8e-07 60.1 108 38.9
Sopen07g006800 Solanum pennellii HOM05D005537 ORTHO05D006776 2.8e-07 60.1 135 33.3
AL6G32140 Arabidopsis lyrata HOM05D005537 ORTHO05D006776 3.6e-07 59.7 116 36.2
Ca_21044_v3 Cicer arietinum L. HOM05D005537 ORTHO05D006776 3.6e-07 59.7 129 34.9
Glyma.13G103200 Glycine max HOM05D005537 ORTHO05D006776 3.6e-07 59.7 145 33.8
BcaB08g36512 Brassica carinata HOM05D005537 ORTHO05D006776 4.8e-07 59.3 124 35.5
HanXRQChr13g0401171 Helianthus annuus HOM05D005537 ORTHO05D006776 6.2e-07 58.9 114 34.2
Lju50A4T51 Lonicera japonica HOM05D005537 ORTHO05D006776 6.2e-07 58.9 157 33.8
PGSC0003DMG400004098 Solanum tuberosum HOM05D005537 ORTHO05D006776 6.2e-07 58.9 135 32.6
Cre01.g019200 Chlamydomonas reinhardtii HOM05D005537 ORTHO05D006776 8.1e-07 58.5 108 32.4
Solyc07g017940.1 Solanum lycopersicum HOM05D005537 ORTHO05D006776 8.1e-07 58.5 135 32.6
Medtr4g133100 Medicago truncatula HOM05D005537 ORTHO05D006776 1.1e-06 58.2 116 36.2
QL11p009893 Quercus lobata HOM05D005537 ORTHO05D006776 1.1e-06 58.2 119 38.7
SGA_v2.0_scaffold17G07935 Striga asiatica HOM05D005537 ORTHO05D006776 1.1e-06 58.2 116 36.2
CAN.G1186.23 Capsicum annuum HOM05D005537 ORTHO05D006776 1.4e-06 57.8 115 32.2
CARHR192210 Cardamine hirsuta HOM05D005537 ORTHO05D006776 1.4e-06 57.8 116 35.3
DCAR_017989 Daucus carota HOM05D005537 ORTHO05D006776 1.4e-06 57.8 168 30.4
SGA_v2.0_scaffold12G06075 Striga asiatica HOM05D005537 ORTHO05D006776 1.8e-06 57.4 116 37.1
HPP92_018575 Vanilla planifolia HOM05D005537 ORTHO05D006776 1.8e-06 57.4 121 38.8
AT5G20600 Arabidopsis thaliana HOM05D005537 ORTHO05D006776 2.4e-06 57.0 116 35.3
Thhalv10013208m.g Eutrema salsugineum HOM05D005537 ORTHO05D006776 2.4e-06 57.0 116 36.2
A10p19410 Brassica napus HOM05D005537 ORTHO05D006776 3.1e-06 56.6 121 33.9
BraA10t44018Z Brassica rapa HOM05D005537 ORTHO05D006776 3.1e-06 56.6 163 28.2
Migut.K00238 Erythranthe guttata HOM05D005537 ORTHO05D006776 3.1e-06 56.6 116 35.3
Peaxi162Scf00231g10125 Petunia axillaris HOM05D005537 ORTHO05D006776 3.1e-06 56.6 115 33.0
Sc18g0003000 Simmondsia chinensis HOM05D005537 ORTHO05D006776 3.1e-06 56.6 115 35.7
unitig_899.g15473 Utricularia gibba HOM05D005537 ORTHO05D006776 3.1e-06 56.6 155 30.3
VMungo1215G0900 Vigna mungo HOM05D005537 ORTHO05D006776 4.0e-06 56.2 145 33.1
MSTRG.26216 Avicennia marina HOM05D005537 ORTHO05D006776 5.3e-06 55.8 116 35.3
A03p10160 Brassica napus HOM05D005537 ORTHO05D006776 5.3e-06 55.8 116 35.3
BraA03t10326Z Brassica rapa HOM05D005537 ORTHO05D006776 5.3e-06 55.8 116 35.3
BcaC04g19447 Brassica carinata HOM05D005537 ORTHO05D006776 9.0e-06 55.1 116 34.5
BolC9t58429H Brassica oleracea HOM05D005537 ORTHO05D006776 9.0e-06 55.1 116 34.5
Lalb_Chr13g0299751 Lupinus albus HOM05D005537 ORTHO05D006776 9.0e-06 55.1 129 34.9


User provided reference genes

Program Settings