Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026407 Carpinus fangiana HOM05D000964 ORTHO05D124590 7.6e-121 437.2 223 100.0
Lj2C1237T33 Lonicera japonica HOM05D000964 ORTHO05D003870 8.7e-08 61.6 119 36.1
Lj2C1239T1 Lonicera japonica HOM05D000964 ORTHO05D003870 8.7e-08 61.6 119 36.1
arahy.Tifrunner.gnm1.ann1.U4I6QC Arachis hypogaea HOM05D000964 ORTHO05D003870 2.5e-07 60.1 119 36.1
QL93p1043_0021 Quercus lobata HOM05D000964 ORTHO05D003870 5.7e-07 58.9 119 36.1
MELO3C001187.2 Cucumis melo HOM05D000964 ORTHO05D003870 7.4e-07 58.5 119 35.3
Lalb_Chr25g0283361 Lupinus albus HOM05D000964 ORTHO05D003870 7.4e-07 58.5 119 35.3
VMungo0783G0001 Vigna mungo HOM05D000964 ORTHO05D003870 7.4e-07 58.5 119 35.3
CAN.G1595.3 Capsicum annuum HOM05D000964 ORTHO05D003870 9.6e-07 58.2 119 34.5
DCAR_032518 Daucus carota HOM05D000964 ORTHO05D003870 9.6e-07 58.2 119 34.5
FvH4_c3g00200 Fragaria vesca HOM05D000964 ORTHO05D003870 9.6e-07 58.2 119 34.5
Gohir.1Z050234 Gossypium hirsutum HOM05D000964 ORTHO05D003870 9.6e-07 58.2 119 34.5
Psat4g041080 Pisum sativum HOM05D000964 ORTHO05D003870 9.6e-07 58.2 119 35.3
Solyc00g500030.1 Solanum lycopersicum HOM05D000964 ORTHO05D003870 9.6e-07 58.2 119 34.5
Solyc00g500075.1 Solanum lycopersicum HOM05D000964 ORTHO05D003870 9.6e-07 58.2 119 34.5
PSO478G2461 Papaver somniferum HOM05D000964 ORTHO05D004047 1.3e-06 57.8 118 34.7
RcHm_v2.0_CPg0501901 Rosa chinensis HOM05D000964 ORTHO05D004047 1.3e-06 57.8 118 35.6
HanXRQChr10g0303901 Helianthus annuus HOM05D000964 ORTHO05D003870 1.6e-06 57.4 119 33.6
Ah.10g027350 Amaranthus hybridus HOM05D000964 ORTHO05D003870 2.1e-06 57.0 119 33.6
ATR0306G003 Amborella trichopoda HOM05D000964 ORTHO05D003870 2.1e-06 57.0 119 34.5
LjContig00318g0022290 Lotus japonicus HOM05D000964 ORTHO05D004047 2.1e-06 57.0 118 34.7
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 2.1e-06 57.0 118 34.7
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 2.1e-06 57.0 118 34.7
PSO548G0016 Papaver somniferum HOM05D000964 ORTHO05D003870 2.1e-06 57.0 119 33.6
HanXRQChr00c0557g0575741 Helianthus annuus HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 32.8
HanXRQChr01g0020231 Helianthus annuus HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 32.8
HanXRQChr04g0127501 Helianthus annuus HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 32.8
HanXRQChr10g0284371 Helianthus annuus HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 32.8
HanXRQChr10g0318071 Helianthus annuus HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 32.8
HanXRQChr11g0326951 Helianthus annuus HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 32.8
HanXRQCPg0580171 Helianthus annuus HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 32.8
PGR111G0041 Punica granatum HOM05D000964 ORTHO05D003870 2.8e-06 56.6 119 34.5
Ah.10g028970 Amaranthus hybridus HOM05D000964 ORTHO05D003870 3.7e-06 56.2 121 34.7
EL10Ac4g07916 Beta vulgaris HOM05D000964 ORTHO05D003870 3.7e-06 56.2 119 32.8
AL2G21710 Arabidopsis lyrata HOM05D000964 ORTHO05D003870 4.8e-06 55.8 119 32.8
arahy.Tifrunner.gnm1.ann1.PR6ML0 Arachis hypogaea HOM05D000964 ORTHO05D003870 4.8e-06 55.8 115 35.7
CAN.G327.19 Capsicum annuum HOM05D000964 ORTHO05D003870 4.8e-06 55.8 117 34.2
HanXRQChr00c0392g0574491 Helianthus annuus HOM05D000964 ORTHO05D004047 4.8e-06 55.8 118 33.1
HanXRQChr08g0207991 Helianthus annuus HOM05D000964 ORTHO05D003870 4.8e-06 55.8 118 33.1
AL2G20570 Arabidopsis lyrata HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
ATCG00750 Arabidopsis thaliana HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BcaNung05008 Brassica carinata HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BNapus_Darmor_BZH_scaffold_253p00340 Brassica napus HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BolSC29t60527H Brassica oleracea HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BolSC29t60608H Brassica oleracea HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BolSC35t60668H Brassica oleracea HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BolSC35t60731H Brassica oleracea HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BraSC138t45555Z Brassica rapa HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
BraSC59t46572Z Brassica rapa HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
CARHR282240 Cardamine hirsuta HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
Sc25g0002040 Simmondsia chinensis HOM05D000964 ORTHO05D003870 6.3e-06 55.5 119 33.6
CAN.G1513.11 Capsicum annuum HOM05D000964 ORTHO05D003870 8.2e-06 55.1 119 34.5
Cfa018462 Carpinus fangiana HOM05D000964 ORTHO05D003870 8.2e-06 55.1 119 35.3
Lsat_1_v5_gn_2_92080 Lactuca sativa HOM05D000964 ORTHO05D004047 8.2e-06 55.1 117 32.5
Lsat_1_v5_gn_6_69061 Lactuca sativa HOM05D000964 ORTHO05D004047 8.2e-06 55.1 117 32.5
Sed0000218 Sechium edule HOM05D000964 ORTHO05D003870 8.2e-06 55.1 119 34.5


User provided reference genes

Program Settings