Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026271 Carpinus fangiana HOM05D006440 ORTHO05D003987 0.0e+00 2084.3 1088 100.0
Solyc09g089660.4 Solanum lycopersicum HOM05D006440 ORTHO05D003987 6.1e-22 110.9 407 25.3
Sopen09g032600 Solanum pennellii HOM05D006440 ORTHO05D003987 1.4e-21 109.8 407 25.3
DCAR_027296 Daucus carota HOM05D006440 ORTHO05D003987 1.8e-21 109.4 426 26.5
Peaxi162Scf00024g01821 Petunia axillaris HOM05D006440 ORTHO05D003987 2.6e-20 105.5 317 25.6
Migut.G00449 Erythranthe guttata HOM05D006440 ORTHO05D003987 4.4e-20 104.8 428 25.7
Lsat_1_v5_gn_3_121341 Lactuca sativa HOM05D006440 ORTHO05D003987 5.7e-20 104.4 410 24.4
CAN.G793.7 Capsicum annuum HOM05D006440 ORTHO05D003987 7.5e-20 104.0 315 25.7
MSTRG.9914 Avicennia marina HOM05D006440 ORTHO05D003987 1.7e-19 102.8 314 28.0
Aqoxy2G03617 Aquilegia oxysepala HOM05D006440 ORTHO05D003987 6.3e-19 100.9 314 27.1
Ah.07g207430 Amaranthus hybridus HOM05D006440 ORTHO05D003987 8.3e-19 100.5 407 24.6
Cc03_g05160 Coffea canephora HOM05D006440 ORTHO05D003987 2.4e-18 99.0 320 27.8
PSO017G7287 Papaver somniferum HOM05D006440 ORTHO05D003987 2.4e-18 99.0 318 27.0
SGA_v2.0_scaffold88G27269 Striga asiatica HOM05D006440 ORTHO05D003987 3.1e-18 98.6 420 24.5
Ciclev10004596m.g Citrus clementina HOM05D006440 ORTHO05D003987 4.1e-18 98.2 317 25.2
TWI09G0180 Tripterygium wilfordii HOM05D006440 ORTHO05D003987 4.1e-18 98.2 313 27.2
ECA240G3037 Erigeron canadensis HOM05D006440 ORTHO05D003987 5.4e-18 97.8 407 24.8
AT5G43500 Arabidopsis thaliana HOM05D006440 ORTHO05D003987 7.0e-18 97.4 404 24.5
HanXRQChr13g0418761 Helianthus annuus HOM05D006440 ORTHO05D003987 1.6e-17 96.3 407 25.6
Nn1g02707 Nelumbo nucifera HOM05D006440 ORTHO05D003987 1.6e-17 96.3 322 25.5
PSO063G3815 Papaver somniferum HOM05D006440 ORTHO05D003987 1.6e-17 96.3 318 26.4
AL8G16820 Arabidopsis lyrata HOM05D006440 ORTHO05D003987 2.7e-17 95.5 405 24.7
CSS0026181 Camellia sinensis var. sinensis HOM05D006440 ORTHO05D003987 3.5e-17 95.1 325 24.9
CANSAT78G1511 Cannabis sativa HOM05D006440 ORTHO05D003987 3.5e-17 95.1 313 26.8
Thhalv10003170m.g Eutrema salsugineum HOM05D006440 ORTHO05D003987 3.5e-17 95.1 311 25.7
Glyma.10G188100 Glycine max HOM05D006440 ORTHO05D003987 4.5e-17 94.7 299 27.1
Eucgr.H03137 Eucalyptus grandis HOM05D006440 ORTHO05D003987 7.7e-17 94.0 400 25.0
Lj6A660T45 Lonicera japonica HOM05D006440 ORTHO05D003987 1.0e-16 93.6 312 25.6
Pp3c3_14850 Physcomitrium patens HOM05D006440 ORTHO05D003987 1.0e-16 93.6 405 28.6
HPP92_008424 Vanilla planifolia HOM05D006440 ORTHO05D003987 1.0e-16 93.6 312 26.3
PGR004G0512 Punica granatum HOM05D006440 ORTHO05D003987 1.3e-16 93.2 401 24.7
Os04g0177600 Oryza sativa ssp. japonica HOM05D006440 ORTHO05D003987 1.7e-16 92.8 349 24.9
EL10Ac3g05914 Beta vulgaris HOM05D006440 ORTHO05D003987 2.3e-16 92.4 404 25.0
COL.COLO4_15832 Corchorus olitorius HOM05D006440 ORTHO05D003987 2.3e-16 92.4 315 24.1
Hund04543 Selenicereus undatus HOM05D006440 ORTHO05D003987 2.3e-16 92.4 403 24.3
BcaB07g30569 Brassica carinata HOM05D006440 ORTHO05D003987 3.8e-16 91.7 303 26.7
SalBow2G2218 Salvia bowleyana HOM05D006440 ORTHO05D003987 3.8e-16 91.7 337 24.9
GSVIVG01027730001 Vitis vinifera HOM05D006440 ORTHO05D003987 3.8e-16 91.7 317 24.3
Gohir.D09G227100 Gossypium hirsutum HOM05D006440 ORTHO05D003987 5.0e-16 91.3 301 25.2
BcaC03g16584 Brassica carinata HOM05D006440 ORTHO05D003987 6.6e-16 90.9 317 25.9
A02p27870 Brassica napus HOM05D006440 ORTHO05D003987 8.6e-16 90.5 294 25.5
BraA02t07826Z Brassica rapa HOM05D006440 ORTHO05D003987 8.6e-16 90.5 294 25.5
Lalb_Chr02g0150571 Lupinus albus HOM05D006440 ORTHO05D003987 8.6e-16 90.5 313 24.9
Ca_09816_v3 Cicer arietinum L. HOM05D006440 ORTHO05D003987 1.1e-15 90.1 347 24.5
CARHR180120 Cardamine hirsuta HOM05D006440 ORTHO05D003987 1.5e-15 89.7 320 22.8
Dinv29887 Davidia involucrata HOM05D006440 ORTHO05D003188 1.5e-15 89.7 324 26.9
Manes.03G166900 Manihot esculenta HOM05D006440 ORTHO05D003987 1.5e-15 89.7 315 26.0
Duzib212G0326 Durio zibethinus HOM05D006440 ORTHO05D003987 1.9e-15 89.4 315 23.8
MELO3C006441.2 Cucumis melo HOM05D006440 ORTHO05D003987 2.5e-15 89.0 315 25.1
Lj5g0005322 Lotus japonicus HOM05D006440 ORTHO05D003987 2.5e-15 89.0 315 25.4
CiPaw.02G114500 Carya illinoinensis HOM05D006440 ORTHO05D003987 3.3e-15 88.6 315 22.5
THA.LOC104815988 Tarenaya hassleriana HOM05D006440 ORTHO05D003987 3.3e-15 88.6 315 23.8
C02p44000 Brassica napus HOM05D006440 ORTHO05D003987 4.2e-15 88.2 317 25.9
Oeu025570.2 Olea europaea HOM05D006440 ORTHO05D000397 4.2e-15 88.2 271 26.2
Sc25g0004030 Simmondsia chinensis HOM05D006440 ORTHO05D003987 4.2e-15 88.2 237 29.1
VMungo0720G1034 Vigna mungo HOM05D006440 ORTHO05D003987 4.2e-15 88.2 342 23.1
BolC2t10447H Brassica oleracea HOM05D006440 ORTHO05D003987 5.5e-15 87.8 317 25.9
CBR_g37544 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-15 87.8 214 31.3
Glyma.20G202700 Glycine max HOM05D006440 ORTHO05D003987 5.5e-15 87.8 315 24.8
Gohir.A09G225400 Gossypium hirsutum HOM05D006440 ORTHO05D003987 5.5e-15 87.8 315 23.2
Sp2g08350 Schrenkiella parvula HOM05D006440 ORTHO05D003987 7.2e-15 87.4 314 25.8
Sed0013572 Sechium edule HOM05D006440 ORTHO05D003987 7.2e-15 87.4 315 24.4
Gorai.006G249000 Gossypium raimondii HOM05D006440 ORTHO05D003987 9.5e-15 87.0 316 23.4
Medtr1g073920 Medicago truncatula HOM05D006440 ORTHO05D003987 9.5e-15 87.0 315 25.7
Prupe.1G035000 Prunus persica HOM05D006440 ORTHO05D003987 9.5e-15 87.0 325 24.3
CsaV3_3G012320 Cucumis sativus L. HOM05D006440 ORTHO05D003987 1.2e-14 86.7 315 24.4
FAN17G2886 Fragaria x ananassa HOM05D006440 ORTHO05D003987 1.2e-14 86.7 316 24.7
Potri.008G165000 Populus trichocarpa HOM05D006440 ORTHO05D003987 1.6e-14 86.3 311 25.1
ATR0680G034 Amborella trichopoda HOM05D006440 ORTHO05D003987 2.8e-14 85.5 156 28.2
FvH4_4g03210 Fragaria vesca HOM05D006440 ORTHO05D003987 2.8e-14 85.5 317 24.6
Nitab4.5_0008345g0020 Nicotiana tabacum HOM05D006440 ORTHO05D003987 2.8e-14 85.5 273 25.6
QL06p016694 Quercus lobata HOM05D006440 ORTHO05D003987 2.8e-14 85.5 315 24.1
arahy.Tifrunner.gnm1.ann1.A0C0SS Arachis hypogaea HOM05D006440 ORTHO05D003987 3.6e-14 85.1 311 24.1
Phvul.007G129000 Phaseolus vulgaris HOM05D006440 ORTHO05D003987 4.7e-14 84.7 309 25.2
Potri.010G073600 Populus trichocarpa HOM05D006440 ORTHO05D003987 4.7e-14 84.7 400 24.0
unitig_748.g7321 Utricularia gibba HOM05D006440 ORTHO05D003987 4.7e-14 84.7 288 27.4
Actinidia04464 Actinidia chinensis HOM05D006440 ORTHO05D003987 6.1e-14 84.3 323 22.3
CDE06G0279 Ceratophyllum demersum HOM05D006440 ORTHO05D003987 8.0e-14 84.0 413 24.2
arahy.Tifrunner.gnm1.ann1.WJ3SQN Arachis hypogaea HOM05D006440 ORTHO05D003987 1.0e-13 83.6 313 24.9
RcHm_v2.0_Chr4g0391871 Rosa chinensis HOM05D006440 ORTHO05D003987 1.0e-13 83.6 317 24.0
Mapoly0028s0034 Marchantia polymorpha HOM05D006440 ORTHO05D003987 1.4e-13 83.2 252 27.4
Atru.chr4.2134 Acer truncatum HOM05D006440 ORTHO05D003987 1.8e-13 82.8 227 26.0
MD13G1210600 Malus domestica HOM05D006440 ORTHO05D003987 1.8e-13 82.8 315 22.2
vmacro08450 Vaccinium macrocarpon HOM05D006440 ORTHO05D003987 1.8e-13 82.8 349 25.2
Rhsim04G0187900 Rhododendron simsii HOM05D006440 ORTHO05D003987 1.2e-12 80.1 180 27.2
Psat6g132960 Pisum sativum HOM05D006440 ORTHO05D003987 4.4e-12 78.2 323 22.3
TAR365G0504 Trochodendron aralioides HOM05D006440 ORTHO05D003987 4.4e-12 78.2 139 28.8
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 9.8e-12 77.0 207 25.6
AUR62002263 Chenopodium quinoa HOM05D006440 ORTHO05D003987 1.3e-11 76.6 309 23.0
Carub.0008s0511 Capsella rubella HOM05D006440 ORTHO05D003987 2.2e-11 75.9 137 27.0
AUR62015479 Chenopodium quinoa HOM05D006440 ORTHO05D003987 2.2e-11 75.9 296 24.0
MBI18_g37356_MAGBIO Magnolia biondii HOM05D006440 ORTHO05D003987 3.7e-11 75.1 326 23.0
Psat2g067040 Pisum sativum HOM05D006440 ORTHO05D003987 8.3e-11 73.9 187 25.1
Sabra10G0034700 Salix brachista HOM05D006440 ORTHO05D003987 2.4e-10 72.4 424 23.1
SMO117G0008 Selaginella moellendorffii HOM05D006440 ORTHO05D003987 4.1e-10 71.6 343 26.8
FAN12G1575 Fragaria x ananassa HOM05D006440 ORTHO05D003987 5.4e-10 71.2 294 24.5
FAN22G0224 Fragaria x ananassa HOM05D006440 ORTHO05D003987 1.2e-09 70.1 293 24.2
Manes.15G038500 Manihot esculenta HOM05D006440 ORTHO05D003987 5.9e-09 67.8 306 23.2
Nitab4.5_0000342g0190 Nicotiana tabacum HOM05D006440 ORTHO05D003987 1.3e-08 66.6 159 29.6
Aa31LG5G3660 Aethionema arabicum HOM05D006440 ORTHO05D003987 5.0e-08 64.7 290 24.1
ClCG05G004420 Citrullus lanatus HOM05D006440 ORTHO05D003987 5.0e-08 64.7 354 22.3
Haze_11338 Corylus avellana HOM05D006440 ORTHO05D003987 2.5e-07 62.4 161 26.1
Thecc.04G250600 Theobroma cacao HOM05D006440 ORTHO05D003987 3.3e-07 62.0 86 31.4


User provided reference genes

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