Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 0.0e+00 2077.8 1348 100.0
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 3.0e-10 72.4 99 40.4
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.8e-08 65.9 76 44.7
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.4e-07 63.5 67 44.8
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 1.8e-07 63.2 78 42.3
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 2.4e-07 62.8 87 40.2
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 2.4e-07 62.8 78 42.3
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 3.1e-07 62.4 67 44.8
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 4.0e-07 62.0 87 39.1
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 4.0e-07 62.0 73 39.7
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 5.3e-07 61.6 67 44.8
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 5.3e-07 61.6 73 43.8
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 1.2e-06 60.5 78 41.0
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 1.2e-06 60.5 76 43.4
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 1.5e-06 60.1 87 40.2
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 1.5e-06 60.1 76 43.4
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 2.0e-06 59.7 67 43.3
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 2.6e-06 59.3 87 39.1
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 2.6e-06 59.3 87 40.2
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 3.4e-06 58.9 87 40.2
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 4.5e-06 58.5 87 37.9
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 4.5e-06 58.5 76 40.8
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 4.5e-06 58.5 87 39.1
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 4.5e-06 58.5 68 42.6
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 5.8e-06 58.2 76 40.8
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 5.8e-06 58.2 87 37.9
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 5.8e-06 58.2 67 43.3
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 7.6e-06 57.8 76 42.1
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 7.6e-06 57.8 76 43.4
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 7.6e-06 57.8 76 39.5
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 7.6e-06 57.8 79 38.0
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 7.6e-06 57.8 87 39.1
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 9.9e-06 57.4 87 37.9
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 9.9e-06 57.4 67 41.8
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 9.9e-06 57.4 72 40.3
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 9.9e-06 57.4 67 43.3


User provided reference genes

Program Settings