Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 0.0e+00 1613.2 830 100.0
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 1.2e-33 149.4 561 28.0
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.2e-30 139.4 559 26.8
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 2.0e-28 132.1 591 24.0
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 4.8e-27 127.5 594 25.3
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 8.2e-27 126.7 571 25.6
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.1e-26 126.3 576 25.0
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 1.8e-26 125.6 562 24.4
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 2.4e-26 125.2 558 24.9
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 4.1e-26 124.4 558 24.7
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 4.5e-25 120.9 554 24.2
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 1.3e-24 119.4 558 25.3
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.7e-24 119.0 597 24.1
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 8.5e-24 116.7 572 25.0
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 4.2e-23 114.4 557 24.1
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 2.1e-22 112.1 557 24.2
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 2.3e-21 108.6 556 23.4
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 6.7e-21 107.1 563 23.1
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.1e-20 106.3 655 22.1
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.1e-20 106.3 559 24.2
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 2.2e-19 102.1 456 25.2
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 2.2e-19 102.1 310 28.4
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 2.8e-19 101.7 441 24.0
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.4e-18 99.4 436 24.3
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.4e-18 99.4 441 24.9
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 7.0e-18 97.1 444 25.0
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 9.1e-18 96.7 431 25.1
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 1.2e-17 96.3 440 24.5
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.2e-17 96.3 407 25.6
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 1.6e-17 95.9 358 26.5
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.6e-17 95.9 449 24.9
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.6e-17 95.9 449 24.7
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 2.0e-17 95.5 350 26.6
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 4.5e-17 94.4 432 25.2
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 7.7e-17 93.6 430 25.8
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 7.7e-17 93.6 440 25.0
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 1.0e-16 93.2 420 25.7
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 1.7e-16 92.4 437 22.9
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 2.9e-16 91.7 430 24.7
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 8.5e-16 90.1 315 26.7
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 1.1e-15 89.7 400 24.8
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 1.5e-15 89.4 431 24.6
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 2.5e-15 88.6 442 25.6
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 9.4e-15 86.7 433 24.7
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 9.4e-15 86.7 404 25.0
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 9.4e-15 86.7 461 25.4
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.2e-14 86.3 336 26.8
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 1.6e-14 85.9 428 24.1
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.6e-14 85.9 449 24.5
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.7e-14 85.1 405 24.4
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 3.6e-14 84.7 398 23.1
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 6.1e-14 84.0 412 23.1
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 4.4e-12 77.8 212 28.8
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 1.1e-10 73.2 444 25.0
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 2.4e-10 72.0 380 22.6
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 2.4e-10 72.0 354 24.0
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 3.1e-10 71.6 396 25.0
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 4.1e-10 71.2 256 27.7
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 5.4e-10 70.9 395 24.3
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 7.0e-10 70.5 256 27.7
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.6e-09 69.3 383 24.5
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 1.6e-09 69.3 354 23.4
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 2.0e-09 68.9 228 27.2
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 3.5e-09 68.2 379 24.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 3.5e-09 68.2 354 23.4
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 4.5e-09 67.8 395 24.3
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 5.9e-09 67.4 208 26.9
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 1.3e-08 66.2 226 27.4
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 1.7e-08 65.9 264 25.8
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 2.2e-08 65.5 361 23.3
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 2.9e-08 65.1 430 24.0
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 8.5e-08 63.5 264 26.5
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.1e-07 63.2 434 21.7
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 7.2e-07 60.5 171 28.7
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 2.7e-06 58.5 348 24.4
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 8.0e-06 57.0 151 27.8


User provided reference genes

Program Settings