Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024529 Carpinus fangiana HOM05D001212 ORTHO05D123187 0.0e+00 1631.3 797 100.0
Cfa022860 Carpinus fangiana HOM05D001212 ORTHO05D000164 3.7e-08 64.7 63 44.4
Hund16045 Selenicereus undatus HOM05D000272 ORTHO05D000164 3.7e-08 64.7 160 31.2
AUR62022792 Chenopodium quinoa HOM05D000272 ORTHO05D000164 8.2e-08 63.5 71 45.1
AUR62012153 Chenopodium quinoa HOM05D000272 ORTHO05D000164 1.8e-07 62.4 71 43.7
MSTRG.21108 Avicennia marina HOM05D000272 ORTHO05D000164 6.9e-07 60.5 235 27.2
Migut.K00376 Erythranthe guttata HOM05D001212 ORTHO05D000246 1.2e-06 59.7 57 47.4
Migut.K00654 Erythranthe guttata HOM05D001212 ORTHO05D000246 1.2e-06 59.7 57 47.4
Migut.K00664 Erythranthe guttata HOM05D001212 ORTHO05D000246 1.2e-06 59.7 57 47.4
HanXRQChr02g0046741 Helianthus annuus HOM05D001212 ORTHO05D000246 1.2e-06 59.7 91 37.4
Hund13804 Selenicereus undatus HOM05D000272 ORTHO05D000164 1.2e-06 59.7 90 38.9
A01p06250 Brassica napus HOM05D001212 ORTHO05D000246 1.5e-06 59.3 54 50.0
BraA01t00592Z Brassica rapa HOM05D001212 ORTHO05D000246 1.5e-06 59.3 54 50.0
SalBow6G3061 Salvia bowleyana HOM05D001212 ORTHO05D000246 1.5e-06 59.3 57 45.6
TWI15G0027 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.0e-06 58.9 80 41.2
arahy.Tifrunner.gnm1.ann1.F096Y2 Arachis hypogaea HOM05D001212 ORTHO05D000246 2.6e-06 58.5 71 43.7
arahy.Tifrunner.gnm1.ann1.ZFW2W7 Arachis hypogaea HOM05D001212 ORTHO05D000246 2.6e-06 58.5 71 43.7
BcaC09g51993 Brassica carinata HOM05D001212 ORTHO05D000246 2.6e-06 58.5 44 54.5
BcaNung03131 Brassica carinata HOM05D001212 ORTHO05D000246 2.6e-06 58.5 44 54.5
C01p06890 Brassica napus HOM05D001212 ORTHO05D000246 2.6e-06 58.5 44 54.5
BolC1t00686H Brassica oleracea HOM05D001212 ORTHO05D000246 2.6e-06 58.5 44 54.5
CDE02G1848 Ceratophyllum demersum HOM05D001212 ORTHO05D000246 2.6e-06 58.5 67 43.3
Sabra10G0151500 Salix brachista HOM05D000272 ORTHO05D000164 2.6e-06 58.5 116 32.8
Hund11447 Selenicereus undatus HOM05D000272 ORTHO05D000164 2.6e-06 58.5 156 28.8
Ah.16g102710 Amaranthus hybridus HOM05D000272 ORTHO05D000164 3.4e-06 58.2 46 56.5
Thhalv10025443m.g Eutrema salsugineum HOM05D001212 ORTHO05D000246 3.4e-06 58.2 57 47.4
Gorai.010G056100 Gossypium raimondii HOM05D001212 ORTHO05D000246 3.4e-06 58.2 56 50.0
Glyma.09G095700 Glycine max HOM05D001212 ORTHO05D000246 4.5e-06 57.8 94 37.2
PGR044G1766 Punica granatum HOM05D001212 ORTHO05D000246 4.5e-06 57.8 54 48.1
Rhsim02G0205900 Rhododendron simsii HOM05D001212 ORTHO05D000246 4.5e-06 57.8 92 37.0
Sp7g29840 Schrenkiella parvula HOM05D001212 ORTHO05D000246 4.5e-06 57.8 44 52.3
TWI63G0121 Tripterygium wilfordii HOM05D001212 ORTHO05D000246 4.5e-06 57.8 54 48.1
TAR626G0978 Trochodendron aralioides HOM05D001212 ORTHO05D000246 4.5e-06 57.8 83 38.6
unitig_746.g26538 Utricularia gibba HOM05D001212 ORTHO05D000246 4.5e-06 57.8 83 38.6
Ah.16g104810 Amaranthus hybridus HOM05D001212 ORTHO05D000246 5.9e-06 57.4 83 38.6
AL7G19850 Arabidopsis lyrata HOM05D001212 ORTHO05D000246 5.9e-06 57.4 44 52.3
AT4G32040 Arabidopsis thaliana HOM05D001212 ORTHO05D000246 5.9e-06 57.4 44 52.3
Carub.0007s0851 Capsella rubella HOM05D001212 ORTHO05D000246 5.9e-06 57.4 44 52.3
CARHR239940 Cardamine hirsuta HOM05D001212 ORTHO05D000246 5.9e-06 57.4 44 52.3
CDE06G2022 Ceratophyllum demersum HOM05D001212 ORTHO05D000246 5.9e-06 57.4 54 46.3
AUR62012445 Chenopodium quinoa HOM05D001212 ORTHO05D000246 5.9e-06 57.4 83 38.6
ECA246G4192 Erigeron canadensis HOM05D001212 ORTHO05D000246 5.9e-06 57.4 54 48.1
ECA292G0001 Erigeron canadensis HOM05D001570 ORTHO05D001566 5.9e-06 57.4 54 48.1
Glyma.15G202200 Glycine max HOM05D001212 ORTHO05D000246 5.9e-06 57.4 94 37.2
Glyma.17G104800 Glycine max HOM05D001212 ORTHO05D000246 5.9e-06 57.4 71 45.1
HanXRQChr13g0403111 Helianthus annuus HOM05D001212 ORTHO05D000246 5.9e-06 57.4 54 48.1
Lsat_1_v5_gn_6_20120 Lactuca sativa HOM05D001212 ORTHO05D000246 5.9e-06 57.4 54 48.1
Nitab4.5_0010572g0010 Nicotiana tabacum HOM05D001212 ORTHO05D000246 5.9e-06 57.4 56 48.2
Sabra05G0179000 Salix brachista HOM05D000272 ORTHO05D000164 5.9e-06 57.4 103 35.0
unitig_46.g18386 Utricularia gibba HOM05D001212 ORTHO05D000246 5.9e-06 57.4 83 38.6
CDE03G0178 Ceratophyllum demersum HOM05D001212 ORTHO05D000246 7.7e-06 57.0 57 45.6
CDE07G1619 Ceratophyllum demersum HOM05D000272 ORTHO05D000164 7.7e-06 57.0 120 35.0
AUR62031570 Chenopodium quinoa HOM05D001212 ORTHO05D000246 7.7e-06 57.0 83 38.6
Gohir.A06G007500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 7.7e-06 57.0 49 53.1
Potri.010G197300 Populus trichocarpa HOM05D000272 ORTHO05D000164 7.7e-06 57.0 77 40.3
SalBow4G0593 Salvia bowleyana HOM05D001212 ORTHO05D000246 7.7e-06 57.0 57 47.4


User provided reference genes

Program Settings