Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023801 Carpinus fangiana HOM05D001476 ORTHO05D002681 0.0e+00 1281.2 627 100.0
ATR0579G121 Amborella trichopoda HOM05D001476 ORTHO05D002681 2.5e-12 78.2 130 33.8
Glyma.19G154500 Glycine max HOM05D001476 ORTHO05D002681 1.1e-10 72.8 169 27.2
MCO13G006 Micromonas commoda HOM05D001476 ORTHO05D002681 2.4e-10 71.6 127 34.6
SEGI_38178 Sequoiadendron giganteum HOM05D001476 ORTHO05D002681 2.4e-10 71.6 180 26.1
Glyma.03G152000 Glycine max HOM05D001476 ORTHO05D002681 3.1e-10 71.2 169 27.2
Lj1g0003644 Lotus japonicus HOM05D001476 ORTHO05D004856 3.1e-10 71.2 126 32.5
DCAR_002743 Daucus carota HOM05D001476 ORTHO05D002681 6.9e-10 70.1 167 25.7
Phvul.001G149600 Phaseolus vulgaris HOM05D001476 ORTHO05D002681 9.0e-10 69.7 170 27.6
VMungo1383G2121 Vigna mungo HOM05D001476 ORTHO05D002681 9.0e-10 69.7 170 26.5
Dinv32948 Davidia involucrata HOM05D001476 ORTHO05D002681 2.0e-09 68.6 169 25.4
Carub.0006s2566 Capsella rubella HOM05D001476 ORTHO05D002681 3.4e-09 67.8 166 28.3
FAN27G1187 Fragaria x ananassa HOM05D001476 ORTHO05D002681 4.5e-09 67.4 128 31.2
Os11g0217500 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D002681 5.8e-09 67.0 130 29.2
arahy.Tifrunner.gnm1.ann1.WU89FT Arachis hypogaea HOM05D001476 ORTHO05D002681 7.6e-09 66.6 126 30.2
ClCG04G007270 Citrullus lanatus HOM05D001476 ORTHO05D002681 7.6e-09 66.6 169 29.0
MELO3C003222.2 Cucumis melo HOM05D001476 ORTHO05D002681 7.6e-09 66.6 133 29.3
CsaV3_4G025970 Cucumis sativus L. HOM05D001476 ORTHO05D002681 7.6e-09 66.6 133 29.3
Eucgr.K02998 Eucalyptus grandis HOM05D001476 ORTHO05D002681 7.6e-09 66.6 132 30.3
FAN20G2385 Fragaria x ananassa HOM05D001476 ORTHO05D002681 7.6e-09 66.6 128 31.2
PSO782G1521 Papaver somniferum HOM05D001476 ORTHO05D002681 7.6e-09 66.6 125 29.6
RcHm_v2.0_Chr6g0291261 Rosa chinensis HOM05D001476 ORTHO05D002681 7.6e-09 66.6 181 27.6
FvH4_2g23770 Fragaria vesca HOM05D001476 ORTHO05D002681 1.0e-08 66.2 128 31.2
Lalb_Chr25g0290221 Lupinus albus HOM05D001476 ORTHO05D002681 1.0e-08 66.2 126 27.8
MBI16_g28724_MAGBIO Magnolia biondii HOM05D001476 ORTHO05D002681 1.0e-08 66.2 126 29.4
Os12g0193200 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D002681 1.0e-08 66.2 129 29.5
PSO063G0778 Papaver somniferum HOM05D001476 ORTHO05D002681 1.0e-08 66.2 125 28.8
unitig_0.g1458 Utricularia gibba HOM05D001476 ORTHO05D002681 1.0e-08 66.2 130 27.7
arahy.Tifrunner.gnm1.ann1.3W2G1M Arachis hypogaea HOM05D001476 ORTHO05D002681 1.3e-08 65.9 126 30.2
BcaNung01733 Brassica carinata HOM05D001476 ORTHO05D002681 1.3e-08 65.9 179 26.8
FAN24G2074 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.3e-08 65.9 128 31.2
Psat3g065040 Pisum sativum HOM05D001476 ORTHO05D002681 1.3e-08 65.9 128 26.6
Mapoly0009s0016 Marchantia polymorpha HOM05D001476 ORTHO05D002681 1.7e-08 65.5 129 26.4
PGR004G0030 Punica granatum HOM05D001476 ORTHO05D002681 2.2e-08 65.1 130 27.7
TWI74G0101 Tripterygium wilfordii HOM05D001476 ORTHO05D002681 2.2e-08 65.1 182 28.0
A05p39780 Brassica napus HOM05D001476 ORTHO05D006149 3.8e-08 64.3 181 26.0
C05p58820 Brassica napus HOM05D001476 ORTHO05D006149 3.8e-08 64.3 181 26.0
BolC5t34534H Brassica oleracea HOM05D001476 ORTHO05D002681 3.8e-08 64.3 181 26.0
BraA05t22761Z Brassica rapa HOM05D001476 ORTHO05D002681 3.8e-08 64.3 181 26.0
Gohir.A01G225100 Gossypium hirsutum HOM05D001476 ORTHO05D002681 3.8e-08 64.3 132 29.5
Gohir.D01G214700 Gossypium hirsutum HOM05D001476 ORTHO05D002681 3.8e-08 64.3 132 29.5
Gorai.002G260900 Gossypium raimondii HOM05D001476 ORTHO05D002681 3.8e-08 64.3 132 29.5
Prupe.8G243000 Prunus persica HOM05D001476 ORTHO05D002681 4.9e-08 63.9 174 25.9
Solyc09g065010.4 Solanum lycopersicum HOM05D001476 ORTHO05D002681 4.9e-08 63.9 180 26.1
Aa31LG3G1630 Aethionema arabicum HOM05D001476 ORTHO05D002681 6.5e-08 63.5 181 26.5
AL6G40450 Arabidopsis lyrata HOM05D001476 ORTHO05D002681 6.5e-08 63.5 144 27.8
BcaC05g29641 Brassica carinata HOM05D001476 ORTHO05D002681 6.5e-08 63.5 181 26.0
CANSAT35G1723 Cannabis sativa HOM05D001476 ORTHO05D002681 6.5e-08 63.5 132 28.0
CARHR083480 Cardamine hirsuta HOM05D001476 ORTHO05D002681 6.5e-08 63.5 181 26.0
AUR62026955 Chenopodium quinoa HOM05D001476 ORTHO05D002681 6.5e-08 63.5 131 27.5
Lsat_1_v5_gn_9_4140 Lactuca sativa HOM05D001476 ORTHO05D002681 6.5e-08 63.5 164 25.0
AagrBONN_evm.TU.Sc2ySwM_228.2468 Anthoceros agrestis HOM05D001476 ORTHO05D002681 8.4e-08 63.2 130 27.7
AT3G09100 Arabidopsis thaliana HOM05D001476 ORTHO05D002681 8.4e-08 63.2 181 26.0
COL.COLO4_14610 Corchorus olitorius HOM05D001476 ORTHO05D002681 8.4e-08 63.2 132 29.5
HanXRQChr10g0282811 Helianthus annuus HOM05D001476 ORTHO05D002681 8.4e-08 63.2 123 26.0
Sed0013899 Sechium edule HOM05D001476 ORTHO05D002681 8.4e-08 63.2 132 30.3
TAR402G0008 Trochodendron aralioides HOM05D001476 ORTHO05D002681 8.4e-08 63.2 125 27.2
CSS0030822 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D002681 1.1e-07 62.8 166 24.7
Carub.0003s0827 Capsella rubella HOM05D001476 ORTHO05D002681 1.1e-07 62.8 181 26.0
AUR62041567 Chenopodium quinoa HOM05D001476 ORTHO05D002681 1.1e-07 62.8 131 27.5
FAN16G1516 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.1e-07 62.8 131 27.5
Gohir.A04G088150 Gossypium hirsutum HOM05D001476 ORTHO05D002681 1.1e-07 62.8 132 29.5
Gohir.D04G128500 Gossypium hirsutum HOM05D001476 ORTHO05D002681 1.1e-07 62.8 132 29.5
Gorai.012G111600 Gossypium raimondii HOM05D001476 ORTHO05D002681 1.1e-07 62.8 132 29.5
MD11G1287800 Malus domestica HOM05D001476 ORTHO05D002681 1.1e-07 62.8 171 26.3
MCO15G599 Micromonas commoda HOM05D001476 ORTHO05D002681 1.1e-07 62.8 59 45.8
AL3G20180 Arabidopsis lyrata HOM05D001476 ORTHO05D002681 1.4e-07 62.4 181 26.0
BraA06t26704Z Brassica rapa HOM05D001476 ORTHO05D002681 1.4e-07 62.4 179 25.7
FAN15G1590 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.4e-07 62.4 62 45.2
MD03G1267300 Malus domestica HOM05D001476 ORTHO05D002681 1.4e-07 62.4 176 26.1
Peaxi162Scf00570g00714 Petunia axillaris HOM05D001476 ORTHO05D002681 1.4e-07 62.4 180 26.1
Pp3c6_20770 Physcomitrium patens HOM05D001476 ORTHO05D002681 1.4e-07 62.4 131 28.2
Pp3c6_20771 Physcomitrium patens HOM05D001476 ORTHO05D002681 1.4e-07 62.4 131 28.2
TWI53G0872 Tripterygium wilfordii HOM05D001476 ORTHO05D002681 1.4e-07 62.4 136 30.9
TWI59G0180 Tripterygium wilfordii HOM05D001476 ORTHO05D002681 1.4e-07 62.4 179 24.6
GSVIVG01034015001 Vitis vinifera HOM05D001476 ORTHO05D002681 1.4e-07 62.4 169 24.9
Aqoxy6G01350 Aquilegia oxysepala HOM05D001476 ORTHO05D002681 1.9e-07 62.0 180 24.4
Hma1.2p1_0257F.1_g103650 Hydrangea macrophylla HOM05D001476 ORTHO05D002681 1.9e-07 62.0 122 28.7
PSO832G3029 Papaver somniferum HOM05D001476 ORTHO05D002681 1.9e-07 62.0 130 26.9
SGA_v2.0_scaffold240G44115 Striga asiatica HOM05D001476 ORTHO05D002681 1.9e-07 62.0 126 27.8
Aqoxy4G03020 Aquilegia oxysepala HOM05D001476 ORTHO05D002681 2.5e-07 61.6 126 25.4
Duzib093G1022 Durio zibethinus HOM05D001476 ORTHO05D002681 2.5e-07 61.6 132 28.8
Gohir.A11G328600 Gossypium hirsutum HOM05D001476 ORTHO05D002681 2.5e-07 61.6 132 28.8
Gohir.D11G347600 Gossypium hirsutum HOM05D001476 ORTHO05D002681 2.5e-07 61.6 132 28.8
Gorai.007G378000 Gossypium raimondii HOM05D001476 ORTHO05D002681 2.5e-07 61.6 132 28.8
Medtr7g094670 Medicago truncatula HOM05D001476 ORTHO05D002681 2.5e-07 61.6 90 31.1
MCO05G676 Micromonas commoda HOM05D003438 ORTHO05D004235 2.5e-07 61.6 106 34.0
Sopen09g026730 Solanum pennellii HOM05D001476 ORTHO05D002681 2.5e-07 61.6 180 25.0
Aa31LG1G22910 Aethionema arabicum HOM05D001476 ORTHO05D002681 3.2e-07 61.2 132 29.5
A06p37860 Brassica napus HOM05D001476 ORTHO05D002681 3.2e-07 61.2 179 26.3
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 3.2e-07 61.2 132 28.0
Cre07.g319150 Chlamydomonas reinhardtii HOM05D001476 ORTHO05D002681 3.2e-07 61.2 59 49.2
Ciclev10011182m.g Citrus clementina HOM05D001476 ORTHO05D002681 3.2e-07 61.2 132 27.3
Thhalv10005507m.g Eutrema salsugineum HOM05D001476 ORTHO05D002681 3.2e-07 61.2 133 31.6
FvH4_6g12120 Fragaria vesca HOM05D001476 ORTHO05D002681 3.2e-07 61.2 130 26.9
FAN02G4390 Fragaria x ananassa HOM05D001476 ORTHO05D002681 3.2e-07 61.2 130 26.9
FAN09G3177 Fragaria x ananassa HOM05D001476 ORTHO05D002681 3.2e-07 61.2 130 26.9
FAN14G2417 Fragaria x ananassa HOM05D001476 ORTHO05D002681 3.2e-07 61.2 130 26.9
Zm00001eb090670 Zea mays HOM05D001476 ORTHO05D002681 3.2e-07 61.2 130 27.7
ECA247G0371 Erigeron canadensis HOM05D001476 ORTHO05D002681 4.2e-07 60.8 123 26.0
TAR636G2843 Trochodendron aralioides HOM05D001476 ORTHO05D002681 4.2e-07 60.8 125 27.2
CiPaw.10G154200 Carya illinoinensis HOM05D001476 ORTHO05D002681 5.5e-07 60.5 132 28.0
Thhalv10000074m.g Eutrema salsugineum HOM05D001476 ORTHO05D002681 5.5e-07 60.5 130 27.7
HanXRQChr04g0102031 Helianthus annuus HOM05D001476 ORTHO05D002681 7.1e-07 60.1 130 25.4
RcHm_v2.0_Chr7g0215321 Rosa chinensis HOM05D001476 ORTHO05D002681 7.1e-07 60.1 138 29.0
Sabra16G0107300 Salix brachista HOM05D001476 ORTHO05D002681 7.1e-07 60.1 132 28.8
Sp3g07560 Schrenkiella parvula HOM05D001476 ORTHO05D002681 7.1e-07 60.1 181 26.0
SGA_v2.0_scaffold106G30525 Striga asiatica HOM05D001476 ORTHO05D002681 7.1e-07 60.1 126 27.8
AUR62003034 Chenopodium quinoa HOM05D003438 ORTHO05D004235 9.3e-07 59.7 258 25.2
Potri.006G096000 Populus trichocarpa HOM05D001476 ORTHO05D002681 9.3e-07 59.7 132 28.8
RcHm_v2.0_Chr3g0463921 Rosa chinensis HOM05D001476 ORTHO05D002681 9.3e-07 59.7 130 26.9
SalBow4G2258 Salvia bowleyana HOM05D001476 ORTHO05D002681 9.3e-07 59.7 130 27.7
Thecc.05G022600 Theobroma cacao HOM05D001476 ORTHO05D002681 9.3e-07 59.7 132 28.0
Cpa.g.sc56.109 Carica papaya HOM05D001476 ORTHO05D002681 1.2e-06 59.3 132 28.8
DCAR_024039 Daucus carota HOM05D001476 ORTHO05D002681 1.2e-06 59.3 132 30.3
Potri.016G110700 Populus trichocarpa HOM05D001476 ORTHO05D002681 1.2e-06 59.3 132 28.8
Actinidia13781 Actinidia chinensis HOM05D001476 ORTHO05D002681 1.6e-06 58.9 181 26.0
Glyma.07G144500 Glycine max HOM05D001476 ORTHO05D002681 1.6e-06 58.9 132 28.8
TPR.G5239 Trifolium pratense HOM05D001476 ORTHO05D002681 2.1e-06 58.5 132 28.0
CSS0039086 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D002681 2.7e-06 58.2 171 27.5
Nn2g11353 Nelumbo nucifera HOM05D001476 ORTHO05D002681 2.7e-06 58.2 125 25.6
VMungo0331G0719 Vigna mungo HOM05D001476 ORTHO05D002681 2.7e-06 58.2 130 26.2
Medtr4g014920 Medicago truncatula HOM05D001476 ORTHO05D002681 3.5e-06 57.8 132 28.0
Hund25139 Selenicereus undatus HOM05D003438 ORTHO05D004235 3.5e-06 57.8 298 27.2
Solyc09g011930.3 Solanum lycopersicum HOM05D001476 ORTHO05D002681 3.5e-06 57.8 132 28.8
Sopen09g006740 Solanum pennellii HOM05D001476 ORTHO05D002681 3.5e-06 57.8 132 28.8
CBR_g49290 Chara braunii HOM05D001476 ORTHO05D002681 4.6e-06 57.4 181 26.0
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 4.6e-06 57.4 132 28.0
Lalb_Chr13g0291281 Lupinus albus HOM05D001476 ORTHO05D002681 4.6e-06 57.4 132 28.0
THA.LOC104827039 Tarenaya hassleriana HOM05D001476 ORTHO05D002681 4.6e-06 57.4 130 28.5
Medtr7g066810 Medicago truncatula HOM05D001476 ORTHO05D002681 6.0e-06 57.0 130 27.7
Psat0s2261g0280 Pisum sativum HOM05D001476 ORTHO05D002681 6.0e-06 57.0 132 28.0
AUR62007840 Chenopodium quinoa HOM05D003438 ORTHO05D004235 7.9e-06 56.6 252 26.2
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 7.9e-06 56.6 132 27.3
Lj3g0015459 Lotus japonicus HOM05D001476 ORTHO05D002681 7.9e-06 56.6 129 26.4
Hund28010 Selenicereus undatus HOM05D001476 ORTHO05D002681 7.9e-06 56.6 131 26.7
Hund28012 Selenicereus undatus HOM05D001476 ORTHO05D002681 7.9e-06 56.6 131 26.7


User provided reference genes

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