Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.0e-105 386.7 195 100.0
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 4.8e-87 324.7 188 85.1
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.2e-84 315.8 188 83.5
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 6.5e-84 314.3 188 84.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.9e-83 312.8 188 84.0
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 5.5e-83 311.2 188 84.0
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 9.4e-83 310.5 188 83.0
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.6e-82 309.7 188 83.5
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.6e-82 309.7 188 83.5
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 2.1e-82 309.3 191 81.2
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.4e-81 306.6 187 82.9
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 2.3e-81 305.8 188 82.4
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.2e-80 303.5 188 83.0
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.5e-80 303.1 188 79.8
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 3.4e-80 302.0 188 80.3
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.4e-80 302.0 187 80.7
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 4.4e-80 301.6 188 80.3
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 4.4e-80 301.6 188 80.3
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 4.4e-80 301.6 188 78.7
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 5.7e-80 301.2 187 79.7
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 7.5e-80 300.8 188 79.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 7.5e-80 300.8 188 80.3
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 7.5e-80 300.8 188 79.3
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 7.5e-80 300.8 188 81.4
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 9.8e-80 300.4 187 80.2
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 6.3e-79 297.7 188 78.7
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 8.3e-79 297.4 188 80.3
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.1e-78 297.0 188 80.3
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.4e-78 296.6 188 79.3
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 4.1e-78 295.0 188 80.9
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 9.1e-78 293.9 188 79.3
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 1.2e-77 293.5 188 77.7
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 5.9e-77 291.2 188 79.3
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 7.7e-77 290.8 188 78.2
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.0e-76 290.4 187 77.0
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.3e-76 289.3 191 79.1
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 6.5e-76 287.7 188 77.1
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 8.6e-76 287.3 187 77.0
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 5.5e-75 284.6 189 78.3
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 5.5e-75 284.6 188 76.6
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 9.5e-75 283.9 190 75.3
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 9.5e-75 283.9 188 76.6
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.1e-74 282.7 191 74.9
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 2.8e-74 282.3 198 76.3
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 2.8e-74 282.3 189 75.1
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 6.1e-74 281.2 189 75.1
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 6.1e-74 281.2 217 68.7
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.0e-73 280.4 189 73.5
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.4e-73 280.0 184 75.5
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.4e-73 280.0 188 75.0
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.4e-73 280.0 189 75.1
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.4e-73 280.0 189 75.1
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.3e-73 279.3 187 74.9
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 4.0e-73 278.5 189 73.0
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 4.0e-73 278.5 189 73.5
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 5.2e-73 278.1 188 74.5
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 6.8e-73 277.7 192 72.9
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.5e-72 276.6 163 81.0
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 4.4e-72 275.0 189 71.4
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 7.5e-72 274.2 189 73.0
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 7.5e-72 274.2 191 74.3
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 9.8e-72 273.9 191 73.8
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.3e-71 273.5 196 68.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.3e-71 273.5 197 72.1
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 6.3e-71 271.2 164 83.5
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 8.3e-71 270.8 188 74.5
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.4e-70 270.0 163 82.2
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 3.1e-70 268.9 188 74.5
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.4e-70 268.1 188 75.0
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.2e-69 266.9 189 72.0
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.6e-69 266.5 187 72.2
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.7e-69 265.8 189 72.0
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.5e-69 265.4 189 72.5
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 4.5e-69 265.0 189 70.4
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 5.9e-69 264.6 186 72.0
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.0e-68 263.8 188 74.5
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.7e-68 263.1 189 71.4
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 2.3e-68 262.7 193 67.9
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 2.9e-68 262.3 189 69.3
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 5.0e-68 261.5 164 78.0
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 6.6e-68 261.2 193 71.0
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.5e-67 260.0 183 72.1
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 2.5e-67 259.2 197 69.0
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 5.6e-67 258.1 182 70.3
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 9.5e-67 257.3 178 71.3
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.2e-66 256.9 161 78.3
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 4.7e-66 255.0 166 74.1
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.1e-66 254.6 161 77.0
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 6.1e-66 254.6 161 78.3
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 6.1e-66 254.6 215 62.3
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 8.0e-66 254.2 145 87.6
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.8e-65 253.1 162 75.3
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.3e-65 252.7 161 77.0
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 3.0e-65 252.3 163 75.5
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 3.0e-65 252.3 162 75.9
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 4.0e-65 251.9 161 78.3
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 5.2e-65 251.5 163 74.2
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 6.8e-65 251.1 179 67.6
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 1.2e-64 250.4 162 73.5
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.2e-64 250.4 164 74.4
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.5e-64 250.0 162 75.9
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 5.7e-64 248.1 161 75.8
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 5.7e-64 248.1 175 72.0
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 7.5e-64 247.7 243 58.0
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 7.5e-64 247.7 184 66.8
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.7e-63 246.5 162 73.5
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.9e-63 245.7 183 68.3
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.1e-62 243.8 161 73.3
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 2.4e-62 242.7 183 65.0
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 2.4e-62 242.7 174 68.4
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 2.4e-62 242.7 190 65.3
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 2.0e-61 239.6 183 64.5
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 3.5e-61 238.8 188 68.1
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 5.9e-61 238.0 184 64.7
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 5.9e-61 238.0 184 64.7
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.8e-61 237.7 189 63.0
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.0e-60 237.3 171 68.4
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 3.0e-60 235.7 171 68.4
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 3.0e-60 235.7 163 70.6
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 3.9e-60 235.3 161 70.8
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 5.0e-60 235.0 171 67.8
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 5.0e-60 235.0 184 64.1
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 5.0e-60 235.0 184 64.1
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 5.0e-60 235.0 161 71.4
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 5.0e-60 235.0 189 65.1
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 8.6e-60 234.2 146 80.1
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 8.6e-60 234.2 175 68.6
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.5e-59 233.4 162 70.4
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 1.5e-59 233.4 162 70.4
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 1.9e-59 233.0 191 63.4
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 2.1e-58 229.6 161 69.6
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.1e-58 229.6 172 67.4
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 8.0e-58 227.6 161 68.3
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 5.2e-57 224.9 162 69.8
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 2.0e-56 223.0 162 66.0
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 2.0e-56 223.0 177 64.4
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 3.6e-50 202.2 147 71.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.3e-47 193.7 189 54.5
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 9.2e-46 187.6 102 89.2
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.1e-43 180.6 102 84.3
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.6e-42 176.8 181 50.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.7e-36 156.8 230 42.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 4.7e-34 148.7 133 54.9
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 3.1e-33 146.0 203 39.4
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.4e-30 136.3 130 57.7
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 4.6e-29 132.1 75 85.3
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 7.3e-27 124.8 63 92.1
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 9.0e-25 117.9 64 82.8
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 2.6e-24 116.3 64 81.2
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 2.2e-23 113.2 64 78.1
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.5e-19 100.5 143 44.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.1e-18 96.7 57 78.9
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 2.2e-15 86.7 92 55.4
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 4.6e-13 79.0 40 85.0
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 1.3e-10 70.9 81 53.1
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.8e-10 68.9 49 65.3
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 4.5e-08 62.4 213 30.5
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.1e-06 57.8 137 34.3


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