Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022890 Carpinus fangiana HOM05D004437 ORTHO05D037942 1.3e-149 533.1 289 100.0
Atru.ctg1434.8 Acer truncatum HOM05D004437 ORTHO05D037942 3.5e-25 119.8 289 37.4
SMO230G0007 Selaginella moellendorffii HOM05D004437 ORTHO05D005401 5.8e-12 75.9 151 35.8
Carub.0004s2829 Capsella rubella HOM05D004437 ORTHO05D005401 9.9e-12 75.1 150 33.3
AL4G44810 Arabidopsis lyrata HOM05D004437 ORTHO05D005401 1.3e-11 74.7 150 34.0
Thhalv10001671m.g Eutrema salsugineum HOM05D004437 ORTHO05D005401 1.7e-11 74.3 156 35.3
A05p05600 Brassica napus HOM05D004437 ORTHO05D005401 2.2e-11 73.9 150 34.0
BraA05t19533Z Brassica rapa HOM05D004437 ORTHO05D005401 2.2e-11 73.9 150 34.0
Zm00001eb208420 Zea mays HOM05D004437 ORTHO05D005401 2.2e-11 73.9 148 35.8
C04p06550 Brassica napus HOM05D004437 ORTHO05D005401 3.8e-11 73.2 150 34.0
BolC4t22280H Brassica oleracea HOM05D004437 ORTHO05D005401 3.8e-11 73.2 150 34.0
CARHR140860 Cardamine hirsuta HOM05D004437 ORTHO05D005401 3.8e-11 73.2 150 34.0
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea HOM05D004437 ORTHO05D005401 8.4e-11 72.0 151 30.5
BcaB02g09022 Brassica carinata HOM05D004437 ORTHO05D005401 8.4e-11 72.0 150 33.3
Sp4g27680 Schrenkiella parvula HOM05D004437 ORTHO05D005401 8.4e-11 72.0 155 33.5
FAN10G4017 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.1e-10 71.6 153 32.7
Manes.05G042100 Manihot esculenta HOM05D004437 ORTHO05D005401 1.4e-10 71.2 152 32.9
FvH4_7g12660 Fragaria vesca HOM05D004437 ORTHO05D005401 1.9e-10 70.9 153 32.0
FAN10G0783 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.9e-10 70.9 153 32.0
THA.LOC104802003 Tarenaya hassleriana HOM05D004437 ORTHO05D005401 1.9e-10 70.9 150 34.0
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea HOM05D004437 ORTHO05D005401 2.4e-10 70.5 151 30.5
Manes.01G263900 Manihot esculenta HOM05D004437 ORTHO05D005401 3.2e-10 70.1 153 32.7
MD04G1070900 Malus domestica HOM05D004437 ORTHO05D005401 4.2e-10 69.7 151 32.5
TWI23G1180 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 4.2e-10 69.7 151 33.1
Gohir.D11G087600 Gossypium hirsutum HOM05D004437 ORTHO05D005401 5.4e-10 69.3 151 31.8
Mapoly0086s0082 Marchantia polymorpha HOM05D004437 ORTHO05D005401 5.4e-10 69.3 157 30.6
RcHm_v2.0_Chr1g0351651 Rosa chinensis HOM05D004437 ORTHO05D005401 5.4e-10 69.3 152 32.9
Gohir.A11G083500 Gossypium hirsutum HOM05D004437 ORTHO05D005401 7.1e-10 68.9 151 31.8
Gorai.007G093600 Gossypium raimondii HOM05D004437 ORTHO05D005401 7.1e-10 68.9 151 31.8
Os02g0122000 Oryza sativa ssp. japonica HOM05D004437 ORTHO05D005401 7.1e-10 68.9 147 34.0
Dinv32406 Davidia involucrata HOM05D004437 ORTHO05D005401 9.3e-10 68.6 162 32.7
Duzib133G0135 Durio zibethinus HOM05D004437 ORTHO05D005401 9.3e-10 68.6 151 31.1
QL08p051220 Quercus lobata HOM05D004437 ORTHO05D005401 9.3e-10 68.6 151 31.8
GSVIVG01027575001 Vitis vinifera HOM05D004437 ORTHO05D005401 9.3e-10 68.6 158 32.9
Dinv43738 Davidia involucrata HOM05D004437 ORTHO05D005401 1.2e-09 68.2 163 32.5
Duzib138G0705 Durio zibethinus HOM05D004437 ORTHO05D005401 1.2e-09 68.2 151 31.1
Migut.C00761 Erythranthe guttata HOM05D004437 ORTHO05D005401 1.2e-09 68.2 155 34.2
Thecc.01G371500 Theobroma cacao HOM05D004437 ORTHO05D005401 1.2e-09 68.2 158 32.3
Atru.chr9.1501 Acer truncatum HOM05D004437 ORTHO05D005401 1.6e-09 67.8 151 31.1
COL.COLO4_23799 Corchorus olitorius HOM05D004437 ORTHO05D005401 1.6e-09 67.8 151 31.8
Cre09.g404400 Chlamydomonas reinhardtii HOM05D004437 ORTHO05D005401 2.1e-09 67.4 144 32.6
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 2.1e-09 67.4 158 32.9
Prupe.5G087000 Prunus persica HOM05D004437 ORTHO05D005401 2.1e-09 67.4 148 32.4
TWI14G0837 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 2.1e-09 67.4 151 32.5
MSTRG.25195 Avicennia marina HOM05D004437 ORTHO05D005401 2.7e-09 67.0 158 33.5
Solyc05g047690.3 Solanum lycopersicum HOM05D004437 ORTHO05D005401 2.7e-09 67.0 157 31.2
Sopen05g027940 Solanum pennellii HOM05D004437 ORTHO05D005401 2.7e-09 67.0 157 31.2
PGSC0003DMG400013695 Solanum tuberosum HOM05D004437 ORTHO05D005401 2.7e-09 67.0 157 31.2
ATR0661G478 Amborella trichopoda HOM05D004437 ORTHO05D005401 3.5e-09 66.6 156 32.1
Eucgr.E01334 Eucalyptus grandis HOM05D004437 ORTHO05D005401 3.5e-09 66.6 151 31.1
Sc22g0000410 Simmondsia chinensis HOM05D004437 ORTHO05D005401 3.5e-09 66.6 151 30.5
CiPaw.01G258300 Carya illinoinensis HOM05D004437 ORTHO05D005401 6.0e-09 65.9 151 30.5
CiPaw.12G100900 Carya illinoinensis HOM05D004437 ORTHO05D005401 6.0e-09 65.9 151 31.8
Lalb_Chr10g0097651 Lupinus albus HOM05D004437 ORTHO05D005401 6.0e-09 65.9 151 30.5
MD02G1197700 Malus domestica HOM05D004437 ORTHO05D005401 6.0e-09 65.9 152 30.9
AT2G45640 Arabidopsis thaliana HOM05D004437 ORTHO05D005401 7.8e-09 65.5 150 30.7
MSTRG.1255 Avicennia marina HOM05D004437 ORTHO05D005401 7.8e-09 65.5 154 33.8
Medtr8g033340 Medicago truncatula HOM05D004437 ORTHO05D005401 7.8e-09 65.5 155 31.0
PSO478G3285 Papaver somniferum HOM05D004437 ORTHO05D005401 7.8e-09 65.5 147 34.0
CDE06G2826 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 1.0e-08 65.1 156 32.1
Glyma.03G019600 Glycine max HOM05D004437 ORTHO05D005401 1.0e-08 65.1 152 30.9
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 1.0e-08 65.1 162 32.7
Nn1g01279 Nelumbo nucifera HOM05D004437 ORTHO05D005401 1.0e-08 65.1 156 31.4
PSO782G1895 Papaver somniferum HOM05D004437 ORTHO05D005401 1.0e-08 65.1 147 33.3
TAR374G0190 Trochodendron aralioides HOM05D004437 ORTHO05D005401 1.0e-08 65.1 165 31.5
Ca_23785_v3 Cicer arietinum L. HOM05D004437 ORTHO05D005401 1.3e-08 64.7 155 30.3
Ciclev10022649m.g Citrus clementina HOM05D004437 ORTHO05D005401 1.3e-08 64.7 153 32.0
CsaV3_3G009410 Cucumis sativus L. HOM05D004437 ORTHO05D005401 1.3e-08 64.7 152 31.6
Psat4g150640 Pisum sativum HOM05D004437 ORTHO05D005401 1.3e-08 64.7 154 29.2
Prupe.2G150900 Prunus persica HOM05D004437 ORTHO05D005401 1.7e-08 64.3 151 29.1
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis HOM05D004437 ORTHO05D005401 2.3e-08 63.9 152 32.9
CAN.G1608.2 Capsicum annuum HOM05D004437 ORTHO05D005401 2.3e-08 63.9 163 30.7
FvH4_5g01190 Fragaria vesca HOM05D004437 ORTHO05D005401 2.3e-08 63.9 148 30.4
FAN04G1903 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.3e-08 63.9 149 30.9
FAN08G0331 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.3e-08 63.9 148 29.7
Nitab4.5_0007346g0070 Nicotiana tabacum HOM05D004437 ORTHO05D005401 2.3e-08 63.9 158 31.6
PGR042G1009 Punica granatum HOM05D004437 ORTHO05D005401 2.3e-08 63.9 148 29.7
TAR629G1686 Trochodendron aralioides HOM05D004437 ORTHO05D005401 2.3e-08 63.9 146 30.8
MELO3C006160.2 Cucumis melo HOM05D004437 ORTHO05D005401 3.0e-08 63.5 152 31.6
VMungo0331G2039 Vigna mungo HOM05D004437 ORTHO05D005401 3.0e-08 63.5 152 30.3
RcHm_v2.0_Chr7g0199901 Rosa chinensis HOM05D004437 ORTHO05D005401 3.9e-08 63.2 149 30.9
ClCG05G001990 Citrullus lanatus HOM05D004437 ORTHO05D005401 5.1e-08 62.8 164 29.3
CsaV3_3G003440 Cucumis sativus L. HOM05D004437 ORTHO05D005401 5.1e-08 62.8 151 30.5
Lj3g0004540 Lotus japonicus HOM05D004437 ORTHO05D005401 5.1e-08 62.8 152 30.3
Hund16975 Selenicereus undatus HOM05D004437 ORTHO05D005401 5.1e-08 62.8 155 31.0
Atru.chr5.365 Acer truncatum HOM05D004437 ORTHO05D005401 6.6e-08 62.4 151 31.1
CANSAT21G0327 Cannabis sativa HOM05D004437 ORTHO05D005401 6.6e-08 62.4 151 31.8
MELO3C014010.2 Cucumis melo HOM05D004437 ORTHO05D005401 6.6e-08 62.4 151 30.5
Phvul.010G087700 Phaseolus vulgaris HOM05D004437 ORTHO05D005401 6.6e-08 62.4 152 29.6
Potri.002G151500 Populus trichocarpa HOM05D004437 ORTHO05D005401 6.6e-08 62.4 145 31.0
Potri.003G119300 Populus trichocarpa HOM05D004437 ORTHO05D005401 1.5e-07 61.2 148 31.1
Aqoxy5G03951 Aquilegia oxysepala HOM05D004437 ORTHO05D005401 1.9e-07 60.8 158 30.4
Cc02_g36970 Coffea canephora HOM05D004437 ORTHO05D005401 1.9e-07 60.8 157 30.6
Potri.014G074000 Populus trichocarpa HOM05D004437 ORTHO05D005401 2.5e-07 60.5 147 29.9
Actinidia09575 Actinidia chinensis HOM05D004437 ORTHO05D005401 3.3e-07 60.1 155 31.0
Sed0003115 Sechium edule HOM05D004437 ORTHO05D005401 3.3e-07 60.1 113 33.6
Peaxi162Scf00988g00110 Petunia axillaris HOM05D004437 ORTHO05D005401 4.3e-07 59.7 157 30.6
SalBow7G1560 Salvia bowleyana HOM05D004437 ORTHO05D005401 4.3e-07 59.7 116 35.3
Sed0010224 Sechium edule HOM05D004437 ORTHO05D005401 5.6e-07 59.3 151 29.1
Hund14703 Selenicereus undatus HOM05D004437 ORTHO05D005401 5.6e-07 59.3 145 31.0
AUR62033386 Chenopodium quinoa HOM05D004437 ORTHO05D005401 7.3e-07 58.9 158 32.9
Pp3c14_24540 Physcomitrium patens HOM05D004437 ORTHO05D005401 7.3e-07 58.9 145 29.0
Cpa.g.sc18.165 Carica papaya HOM05D004437 ORTHO05D005401 9.6e-07 58.5 113 36.3
SHI32178 Sapria himalayana HOM05D004437 ORTHO05D005401 9.6e-07 58.5 90 38.9
FAN13G0465 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.3e-06 58.2 154 28.6
SGA_v2.0_scaffold11G05840 Striga asiatica HOM05D000186 ORTHO05D001124 1.3e-06 58.2 116 34.5
SGA_v2.0_scaffold201G41379 Striga asiatica HOM05D000186 ORTHO05D001124 1.3e-06 58.2 116 34.5
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 1.3e-06 58.2 120 35.0
SEGI_23012 Sequoiadendron giganteum HOM05D004437 ORTHO05D005401 1.6e-06 57.8 159 30.8
Haze_08988 Corylus avellana HOM05D004437 ORTHO05D005401 3.6e-06 56.6 145 30.3
EL10Ac1g00948 Beta vulgaris HOM05D004437 ORTHO05D005401 4.8e-06 56.2 117 33.3
Cfa012070 Carpinus fangiana HOM05D004437 ORTHO05D005401 4.8e-06 56.2 165 29.1
Aa31LG1G27110 Aethionema arabicum HOM05D004437 ORTHO05D005401 6.2e-06 55.8 120 35.0
Lsat_1_v5_gn_7_6120 Lactuca sativa HOM05D004437 ORTHO05D005401 8.1e-06 55.5 157 29.9


User provided reference genes

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