Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 5.9e-155 550.8 276 100.0
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 2.6e-46 189.9 270 41.5
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 2.7e-43 179.9 269 40.9
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 3.6e-43 179.5 267 40.1
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 6.1e-43 178.7 273 39.2
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 6.1e-43 178.7 264 40.9
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 1.4e-42 177.6 268 39.6
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.8e-42 177.2 268 39.6
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.8e-42 177.2 268 39.6
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 1.8e-42 177.2 270 39.6
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 2.3e-42 176.8 267 40.8
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.3e-42 176.8 277 39.0
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 3.0e-42 176.4 268 39.9
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 3.0e-42 176.4 262 40.8
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 3.0e-42 176.4 262 40.8
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 5.1e-42 175.6 260 40.4
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 5.1e-42 175.6 262 40.8
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 5.1e-42 175.6 256 41.4
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.1e-42 175.6 271 41.3
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 6.7e-42 175.3 262 40.5
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 6.7e-42 175.3 267 40.1
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 8.8e-42 174.9 266 40.2
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 8.8e-42 174.9 270 39.6
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 1.1e-41 174.5 266 40.2
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 1.1e-41 174.5 275 38.5
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.1e-41 174.5 267 40.1
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.1e-41 174.5 267 39.7
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 1.5e-41 174.1 267 40.8
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 1.5e-41 174.1 262 40.5
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.5e-41 174.1 267 39.3
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 2.0e-41 173.7 267 40.8
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 2.5e-41 173.3 260 40.8
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 2.5e-41 173.3 256 41.8
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 3.3e-41 172.9 262 40.5
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 3.3e-41 172.9 265 40.8
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 3.3e-41 172.9 261 42.5
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 4.3e-41 172.6 264 40.5
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 4.3e-41 172.6 262 40.1
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 5.7e-41 172.2 260 40.4
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 5.7e-41 172.2 271 40.2
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 5.7e-41 172.2 261 40.2
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 7.4e-41 171.8 269 40.5
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 7.4e-41 171.8 269 40.5
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 7.4e-41 171.8 261 41.8
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 7.4e-41 171.8 270 41.5
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 9.7e-41 171.4 269 39.8
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 9.7e-41 171.4 262 40.1
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 9.7e-41 171.4 262 40.1
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 9.7e-41 171.4 258 40.3
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 9.7e-41 171.4 256 41.4
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 1.3e-40 171.0 262 39.7
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 1.3e-40 171.0 273 39.2
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.3e-40 171.0 256 40.2
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 1.3e-40 171.0 256 39.5
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 3.7e-40 169.5 257 42.4
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 4.8e-40 169.1 256 40.2
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 1.1e-39 167.9 270 38.9
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.4e-39 167.5 269 38.3
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 1.4e-39 167.5 270 38.9
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 1.4e-39 167.5 270 38.9
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 1.4e-39 167.5 274 39.1
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.8e-39 167.2 269 39.0
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.4e-39 166.8 260 39.6
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 2.4e-39 166.8 258 39.1
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 3.1e-39 166.4 256 38.3
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 3.1e-39 166.4 269 39.4
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 3.1e-39 166.4 264 40.5
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 3.1e-39 166.4 256 40.6
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 4.1e-39 166.0 256 39.1
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 5.3e-39 165.6 258 39.1
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 5.3e-39 165.6 267 39.0
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 5.3e-39 165.6 220 42.7
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 6.9e-39 165.2 259 39.0
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 9.1e-39 164.9 266 37.6
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 1.2e-38 164.5 273 37.7
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 1.5e-38 164.1 258 39.5
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.5e-38 164.1 256 40.6
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 2.0e-38 163.7 257 40.1
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.6e-38 163.3 266 39.1
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 2.6e-38 163.3 265 37.0
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 2.6e-38 163.3 266 39.1
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.5e-38 162.5 260 39.6
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 7.7e-38 161.8 220 42.3
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 7.7e-38 161.8 263 38.0
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 1.0e-37 161.4 260 38.1
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 1.0e-37 161.4 268 38.1
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 1.3e-37 161.0 263 38.0
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 3.8e-37 159.5 260 37.3
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 8.5e-37 158.3 258 40.3
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 1.1e-36 157.9 260 38.5
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.4e-36 157.5 306 35.0
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.4e-36 157.5 256 37.1
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 1.4e-36 157.5 270 38.5
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.5e-36 156.8 265 38.5
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 3.2e-36 156.4 260 38.5
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 4.2e-36 156.0 224 40.6
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 4.2e-36 156.0 263 38.0
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 5.5e-36 155.6 261 39.8
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.7e-35 153.3 233 40.8
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 1.4e-34 151.0 267 35.6
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.8e-34 150.6 259 36.7
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 3.0e-34 149.8 254 38.2
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 5.1e-34 149.1 166 49.4
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 2.0e-33 147.1 225 37.3
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 2.0e-33 147.1 220 39.5
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 9.7e-33 144.8 284 35.9
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 1.7e-32 144.1 256 35.9
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 6.3e-32 142.1 166 46.4
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 4.1e-31 139.4 166 46.4
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 1.7e-29 134.0 201 38.8
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.1e-28 131.3 201 40.3
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 1.2e-27 127.9 207 36.2
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 4.7e-27 125.9 175 39.4
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 2.3e-26 123.6 190 39.5
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 8.8e-26 121.7 147 44.9
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 1.7e-24 117.5 226 36.3
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 6.3e-24 115.5 267 34.1
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 2.4e-23 113.6 125 50.4
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 4.5e-22 109.4 211 35.1
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 1.0e-21 108.2 107 51.4
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 8.0e-19 98.6 103 47.6
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 1.6e-14 84.3 65 58.5
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 6.5e-13 79.0 147 34.0
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 7.2e-12 75.5 147 33.3
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 3.6e-11 73.2 145 33.8
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 4.0e-10 69.7 263 28.1
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 5.2e-10 69.3 65 47.7
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 3.4e-09 66.6 69 47.8
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 2.2e-08 63.9 138 32.6
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 2.8e-08 63.5 52 55.8


User provided reference genes

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