Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022583 Carpinus fangiana HOM05D004132 ORTHO05D006273 1.5e-286 988.8 487 100.0
MCO13G295 Micromonas commoda HOM05D004132 ORTHO05D006273 6.6e-93 345.5 481 41.0
PRCOL_00002437 Prasinoderma coloniale HOM05D004132 ORTHO05D006273 2.8e-91 340.1 441 42.4
Cre02.g079600 Chlamydomonas reinhardtii HOM05D004132 ORTHO05D006273 2.3e-90 337.0 424 43.9
Pp3c5_15740 Physcomitrium patens HOM05D004132 ORTHO05D006273 1.7e-88 330.9 433 41.8
A07p23930 Brassica napus HOM05D004132 ORTHO05D006273 2.9e-88 330.1 442 42.1
Gorai.011G155000 Gossypium raimondii HOM05D004132 ORTHO05D006273 2.9e-88 330.1 428 42.8
Peaxi162Scf00858g00012 Petunia axillaris HOM05D004132 ORTHO05D006273 2.9e-88 330.1 432 43.1
Zm00001eb153980 Zea mays HOM05D004132 ORTHO05D006273 2.9e-88 330.1 428 42.3
BcaC07g40186 Brassica carinata HOM05D004132 ORTHO05D006273 4.9e-88 329.3 428 42.1
AT3G58140 Arabidopsis thaliana HOM05D004132 ORTHO05D006273 6.4e-88 328.9 428 41.6
Aa31LG10G12860 Aethionema arabicum HOM05D004132 ORTHO05D006273 8.4e-88 328.6 428 42.8
BcaB02g07547 Brassica carinata HOM05D004132 ORTHO05D006273 8.4e-88 328.6 442 42.1
BolC8t50964H Brassica oleracea HOM05D004132 ORTHO05D006273 8.4e-88 328.6 442 42.1
Cc09_g05560 Coffea canephora HOM05D004132 ORTHO05D006273 8.4e-88 328.6 482 39.8
C06p25160 Brassica napus HOM05D004132 ORTHO05D006273 1.1e-87 328.2 442 41.9
CARHR168500 Cardamine hirsuta HOM05D004132 ORTHO05D006273 1.1e-87 328.2 442 41.6
BolC6t37674H Brassica oleracea HOM05D004132 ORTHO05D006273 1.4e-87 327.8 442 41.9
BraA07t30044Z Brassica rapa HOM05D004132 ORTHO05D006273 1.4e-87 327.8 442 41.9
Zm00001eb371320 Zea mays HOM05D004132 ORTHO05D006273 1.4e-87 327.8 428 42.3
arahy.Tifrunner.gnm1.ann1.KJS3LB Arachis hypogaea HOM05D004132 ORTHO05D006273 1.9e-87 327.4 428 42.5
arahy.Tifrunner.gnm1.ann1.L32XPY Arachis hypogaea HOM05D004132 ORTHO05D006273 1.9e-87 327.4 428 42.5
BcaC08g44901 Brassica carinata HOM05D004132 ORTHO05D006273 1.9e-87 327.4 442 41.9
A09p50920 Brassica napus HOM05D004132 ORTHO05D006273 1.9e-87 327.4 442 42.1
BraA09t40538Z Brassica rapa HOM05D004132 ORTHO05D006273 1.9e-87 327.4 442 42.1
Gohir.A10G126900 Gossypium hirsutum HOM05D004132 ORTHO05D006273 1.9e-87 327.4 430 42.1
BcaC07g40275 Brassica carinata HOM05D004132 ORTHO05D006273 2.4e-87 327.0 442 42.1
Glyma.02G091300 Glycine max HOM05D004132 ORTHO05D006273 2.4e-87 327.0 465 41.1
HPP92_026254 Vanilla planifolia HOM05D004132 ORTHO05D006273 2.4e-87 327.0 428 43.0
C08p33670 Brassica napus HOM05D004132 ORTHO05D006273 3.2e-87 326.6 442 42.1
Gohir.D10G139300 Gossypium hirsutum HOM05D004132 ORTHO05D006273 3.2e-87 326.6 430 42.1
Mapoly0072s0003 Marchantia polymorpha HOM05D004132 ORTHO05D006273 3.2e-87 326.6 428 42.8
Carub.0005s2499 Capsella rubella HOM05D004132 ORTHO05D006273 4.1e-87 326.2 442 41.9
Sed0002662 Sechium edule HOM05D004132 ORTHO05D006273 5.4e-87 325.9 428 41.8
SMO361G0681 Selaginella moellendorffii HOM05D004132 ORTHO05D006273 5.4e-87 325.9 447 40.3
unitig_37.g12049 Utricularia gibba HOM05D004132 ORTHO05D006273 5.4e-87 325.9 424 42.9
Sp5g04580 Schrenkiella parvula HOM05D004132 ORTHO05D006273 7.1e-87 325.5 442 42.3
Os12g0533700 Oryza sativa ssp. japonica HOM05D004132 ORTHO05D006273 1.2e-86 324.7 428 41.8
Ah.06g194990 Amaranthus hybridus HOM05D004132 ORTHO05D006273 1.6e-86 324.3 428 41.4
AL5G39830 Arabidopsis lyrata HOM05D004132 ORTHO05D006273 1.6e-86 324.3 428 41.6
Thhalv10005992m.g Eutrema salsugineum HOM05D004132 ORTHO05D006273 2.7e-86 323.6 442 41.9
Lalb_Chr17g0336121 Lupinus albus HOM05D004132 ORTHO05D006273 2.7e-86 323.6 428 42.1
COL.COLO4_20206 Corchorus olitorius HOM05D004132 ORTHO05D006273 3.5e-86 323.2 428 41.1
MELO3C007024.2 Cucumis melo HOM05D004132 ORTHO05D006273 3.5e-86 323.2 428 41.6
CsaV3_6G052840 Cucumis sativus L. HOM05D004132 ORTHO05D006273 3.5e-86 323.2 428 41.6
Sopen05g034650 Solanum pennellii HOM05D004132 ORTHO05D006273 3.5e-86 323.2 428 42.3
THA.LOC104826464 Tarenaya hassleriana HOM05D004132 ORTHO05D006273 3.5e-86 323.2 428 41.8
VMungo1383G0131 Vigna mungo HOM05D004132 ORTHO05D006273 3.5e-86 323.2 428 41.6
Lj6g0002780 Lotus japonicus HOM05D004132 ORTHO05D006273 4.6e-86 322.8 430 41.2
Psat3g096280 Pisum sativum HOM05D004132 ORTHO05D006273 6.0e-86 322.4 428 42.3
PGSC0003DMG400023334 Solanum tuberosum HOM05D004132 ORTHO05D006273 6.0e-86 322.4 428 42.1
Glyma.18G291800 Glycine max HOM05D004132 ORTHO05D006273 7.8e-86 322.0 428 42.5
Solyc05g056260.2 Solanum lycopersicum HOM05D004132 ORTHO05D006273 7.8e-86 322.0 428 42.1
GSVIVG01010923001 Vitis vinifera HOM05D004132 ORTHO05D006273 7.8e-86 322.0 433 41.6
FAN16G0015 Fragaria x ananassa HOM05D004132 ORTHO05D006273 1.3e-85 321.2 428 42.1
Phvul.008G010100 Phaseolus vulgaris HOM05D004132 ORTHO05D006273 1.3e-85 321.2 465 40.6
ECA232G2283 Erigeron canadensis HOM05D004132 ORTHO05D006273 1.7e-85 320.9 424 41.3
Lsat_1_v5_gn_8_118000 Lactuca sativa HOM05D004132 ORTHO05D006273 1.7e-85 320.9 425 42.8
SGA_v2.0_scaffold175G39350 Striga asiatica HOM05D004132 ORTHO05D006273 1.7e-85 320.9 428 41.8
SGA_v2.0_scaffold298G47699 Striga asiatica HOM05D004132 ORTHO05D006273 1.7e-85 320.9 475 39.6
Thecc.04G197300 Theobroma cacao HOM05D004132 ORTHO05D006273 1.7e-85 320.9 430 40.9
ClCG01G025610 Citrullus lanatus HOM05D004132 ORTHO05D006273 2.3e-85 320.5 428 41.1
CDE05G2803 Ceratophyllum demersum HOM05D004132 ORTHO05D006273 3.0e-85 320.1 429 41.5
Ca_06096_v3 Cicer arietinum L. HOM05D004132 ORTHO05D006273 3.0e-85 320.1 428 42.1
THA.LOC104800472 Tarenaya hassleriana HOM05D004132 ORTHO05D006273 3.0e-85 320.1 428 41.6
CANSAT78G2113 Cannabis sativa HOM05D004132 ORTHO05D006273 3.9e-85 319.7 470 41.1
CAN.G1921.3 Capsicum annuum HOM05D004132 ORTHO05D006273 3.9e-85 319.7 428 41.8
Hma1.2p1_0325F.1_g126090 Hydrangea macrophylla HOM05D004132 ORTHO05D006273 3.9e-85 319.7 430 41.2
MSTRG.16365 Avicennia marina HOM05D004132 ORTHO05D006273 5.1e-85 319.3 428 41.1
Ciclev10011787m.g Citrus clementina HOM05D004132 ORTHO05D006273 5.1e-85 319.3 428 41.6
AagrBONN_evm.TU.Sc2ySwM_344.2605 Anthoceros agrestis HOM05D004132 ORTHO05D006273 8.6e-85 318.5 428 41.6
CDE05G2281 Ceratophyllum demersum HOM05D004132 ORTHO05D006273 8.6e-85 318.5 429 41.5
RcHm_v2.0_Chr5g0020641 Rosa chinensis HOM05D004132 ORTHO05D006273 8.6e-85 318.5 428 41.6
Eucgr.C02274 Eucalyptus grandis HOM05D004132 ORTHO05D006273 1.1e-84 318.2 447 40.5
QL04p095526 Quercus lobata HOM05D004132 ORTHO05D006273 1.1e-84 318.2 428 41.1
RcHm_v2.0_Chr3g0486261 Rosa chinensis HOM05D004132 ORTHO05D006273 1.1e-84 318.2 428 41.4
TWI59G0283 Tripterygium wilfordii HOM05D004132 ORTHO05D006273 1.1e-84 318.2 428 41.4
HanXRQChr12g0367151 Helianthus annuus HOM05D004132 ORTHO05D006273 1.5e-84 317.8 424 42.2
Nn6g34644 Nelumbo nucifera HOM05D004132 ORTHO05D006273 1.5e-84 317.8 428 41.6
Medtr7g083030 Medicago truncatula HOM05D004132 ORTHO05D006273 1.9e-84 317.4 430 41.6
FvH4_3g12680 Fragaria vesca HOM05D004132 ORTHO05D006273 2.5e-84 317.0 428 41.6
Duzib151G0861 Durio zibethinus HOM05D004132 ORTHO05D006273 3.3e-84 316.6 428 41.1
MBI07_g09898_MAGBIO Magnolia biondii HOM05D004132 ORTHO05D006273 3.3e-84 316.6 431 41.5
Sabra13G0090900 Salix brachista HOM05D004132 ORTHO05D006273 3.3e-84 316.6 430 40.9
Atru.chr3.3175 Acer truncatum HOM05D004132 ORTHO05D006273 4.3e-84 316.2 485 38.1
Ah.04g159510 Amaranthus hybridus HOM05D004132 ORTHO05D006273 4.3e-84 316.2 424 42.2
Cfa000667 Carpinus fangiana HOM05D004132 ORTHO05D006273 4.3e-84 316.2 430 40.7
DCAR_001290 Daucus carota HOM05D004132 ORTHO05D006273 5.6e-84 315.8 435 40.7
Nitab4.5_0000582g0060 Nicotiana tabacum HOM05D004132 ORTHO05D006273 5.6e-84 315.8 413 42.4
PSO063G4358 Papaver somniferum HOM05D004132 ORTHO05D006273 5.6e-84 315.8 433 41.3
FAN25G0118 Fragaria x ananassa HOM05D004132 ORTHO05D006273 7.3e-84 315.5 428 41.8
Potri.013G105200 Populus trichocarpa HOM05D004132 ORTHO05D006273 7.3e-84 315.5 430 41.2
Sc08g0001660 Simmondsia chinensis HOM05D004132 ORTHO05D006273 7.3e-84 315.5 428 41.6
PSO421G0604 Papaver somniferum HOM05D004132 ORTHO05D006273 9.6e-84 315.1 433 41.3
Prupe.4G115500 Prunus persica HOM05D004132 ORTHO05D006273 9.6e-84 315.1 428 40.9
PGR102G2051 Punica granatum HOM05D004132 ORTHO05D006273 1.2e-83 314.7 504 38.5
CiPaw.09G074000 Carya illinoinensis HOM05D004132 ORTHO05D006273 2.1e-83 313.9 430 40.5
MD10G1229100 Malus domestica HOM05D004132 ORTHO05D006273 3.6e-83 313.2 433 40.4
Eucgr.C02393 Eucalyptus grandis HOM05D004132 ORTHO05D006273 4.7e-83 312.8 446 40.6
MD05G1248600 Malus domestica HOM05D004132 ORTHO05D006273 4.7e-83 312.8 433 40.4
SalBow7G0375 Salvia bowleyana HOM05D004132 ORTHO05D006273 4.7e-83 312.8 428 41.1
Lj5g0016492 Lotus japonicus HOM05D004132 ORTHO05D006273 6.2e-83 312.4 414 41.5
Hund00133 Selenicereus undatus HOM05D004132 ORTHO05D006273 8.1e-83 312.0 428 40.0
CSS0017532 Camellia sinensis var. sinensis HOM05D004132 ORTHO05D006273 1.1e-82 311.6 475 38.9
Cpa.g.sc84.15 Carica papaya HOM05D004132 ORTHO05D006273 1.1e-82 311.6 430 40.5
Manes.12G056400 Manihot esculenta HOM05D004132 ORTHO05D006273 1.1e-82 311.6 412 42.0
Migut.D01293 Erythranthe guttata HOM05D004132 ORTHO05D006273 1.4e-82 311.2 490 37.8
Dinv25393 Davidia involucrata HOM05D004132 ORTHO05D006273 1.8e-82 310.8 428 40.9
TAR626G0350 Trochodendron aralioides HOM05D004132 ORTHO05D006273 1.8e-82 310.8 430 40.5
Nitab4.5_0004719g0050 Nicotiana tabacum HOM05D004132 ORTHO05D006273 2.4e-82 310.5 410 42.4
TPR.G28546 Trifolium pratense HOM05D004132 ORTHO05D006273 2.4e-82 310.5 412 41.3
Rhsim04G0004400 Rhododendron simsii HOM05D004132 ORTHO05D006273 4.0e-82 309.7 440 40.2
Aqoxy7G00307 Aquilegia oxysepala HOM05D004132 ORTHO05D006273 5.2e-82 309.3 428 40.0
Hund06337 Selenicereus undatus HOM05D004132 ORTHO05D006273 5.2e-82 309.3 415 41.9
Aqoxy2G02279 Aquilegia oxysepala HOM05D004132 ORTHO05D006273 6.9e-82 308.9 428 39.7
ATR0215G010 Amborella trichopoda HOM05D004132 ORTHO05D006273 7.6e-81 305.4 428 40.4
AUR62013238 Chenopodium quinoa HOM05D004132 ORTHO05D006273 7.6e-81 305.4 410 41.7
EL10Ac9g22320 Beta vulgaris HOM05D004132 ORTHO05D006273 2.9e-80 303.5 412 41.0
Dinv31163 Davidia involucrata HOM05D004132 ORTHO05D006273 6.4e-80 302.4 381 43.8
CBR_g19753 Chara braunii HOM05D004132 ORTHO05D006273 2.1e-78 297.4 428 39.3
Haze_26151 Corylus avellana HOM05D004132 ORTHO05D006273 2.3e-77 293.9 458 38.4
Sed0008608 Sechium edule HOM05D004132 ORTHO05D006273 1.1e-76 291.6 360 44.2
Lj1g0015918 Lotus japonicus HOM05D004132 ORTHO05D006273 4.8e-75 286.2 378 41.8
GSVIVG01020339001 Vitis vinifera HOM05D004132 ORTHO05D006273 1.2e-70 271.6 428 36.4
AUR62010256 Chenopodium quinoa HOM05D004132 ORTHO05D006273 2.8e-67 260.4 410 38.3
Haze_06152 Corylus avellana HOM05D004132 ORTHO05D006273 4.2e-63 246.5 543 33.5
Oeu018076.1 Olea europaea HOM05D004132 ORTHO05D006273 9.0e-58 228.8 203 54.2
TAR627G0383 Trochodendron aralioides HOM05D004132 ORTHO05D018522 5.5e-55 219.5 203 52.2
SEGI_05248 Sequoiadendron giganteum HOM05D004132 ORTHO05D006273 2.7e-54 217.2 309 38.8
GSVIVG01020347001 Vitis vinifera HOM05D004132 ORTHO05D006273 1.2e-46 191.8 309 36.6
Dinv25394 Davidia involucrata HOM05D004132 ORTHO05D006273 1.5e-44 184.9 258 39.5
Oeu056054.1 Olea europaea HOM05D004132 ORTHO05D006273 3.8e-32 143.7 410 29.5
ECA233G2583 Erigeron canadensis HOM05D004132 ORTHO05D006273 6.5e-32 142.9 246 35.4
GSVIVG01020308001 Vitis vinifera HOM05D004132 ORTHO05D018522 6.7e-29 132.9 141 50.4
GSVIVG01020335001 Vitis vinifera HOM05D004132 ORTHO05D006273 2.2e-27 127.9 254 32.3
Oeu056055.1 Olea europaea HOM05D004132 ORTHO05D006273 6.3e-27 126.3 249 31.7
GSVIVG01020319001 Vitis vinifera HOM05D004132 ORTHO05D035098 4.7e-22 110.2 128 43.0
FAN21G3660 Fragaria x ananassa HOM05D004132 ORTHO05D035098 1.4e-21 108.6 130 41.5
HanXRQChr09g0260401 Helianthus annuus HOM05D004132 ORTHO05D018522 9.7e-20 102.4 120 44.2
SEGI_34381 Sequoiadendron giganteum HOM05D004132 ORTHO05D018522 4.8e-19 100.1 120 43.3
CSS0033836 Camellia sinensis var. sinensis HOM05D004132 ORTHO05D018840 6.3e-19 99.8 150 37.3
QL04p095492 Quercus lobata HOM05D004132 ORTHO05D018840 6.5e-16 89.7 83 47.0
Rhsim08G0147200 Rhododendron simsii HOM05D004132 ORTHO05D018840 7.2e-15 86.3 81 50.6
Rhsim01G0214100 Rhododendron simsii HOM05D004132 ORTHO05D018840 1.2e-14 85.5 74 54.1
Hma1.2p1_0634F.1_g192870 Hydrangea macrophylla HOM05D004132 ORTHO05D018840 1.4e-13 82.0 124 37.1
Oeu050047.1 Olea europaea HOM05D004132 ORTHO05D018840 2.3e-13 81.3 104 39.4
BcaC09g51753 Brassica carinata HOM05D004132 ORTHO05D000912 2.0e-09 68.2 69 47.8
AL4G21280 Arabidopsis lyrata HOM05D004132 ORTHO05D000124 7.7e-09 66.2 97 39.2
Rhsim06G0102600 Rhododendron simsii HOM05D004132 ORTHO05D018840 8.6e-08 62.8 66 45.5
arahy.Tifrunner.gnm1.ann1.0UIU5S Arachis hypogaea HOM05D004132 ORTHO05D018522 1.5e-07 62.0 67 47.8
HanXRQChr16g0516741 Helianthus annuus HOM05D004132 ORTHO05D018522 5.5e-07 60.1 53 56.6
Carub.0005s1088 Capsella rubella HOM05D001579 ORTHO05D003470 8.0e-06 56.2 274 23.0


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