Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022403 Carpinus fangiana HOM05D004730 ORTHO05D005705 1.8e-286 988.8 595 100.0
Phvul.005G029900 Phaseolus vulgaris HOM05D004730 ORTHO05D005705 1.1e-33 149.1 365 30.7
CBR_g66692 Chara braunii HOM05D004730 ORTHO05D005705 1.9e-33 148.3 349 29.2
Medtr3g018770 Medicago truncatula HOM05D004730 ORTHO05D005705 9.4e-33 146.0 354 30.2
MCO03G136 Micromonas commoda HOM05D004730 ORTHO05D005705 9.4e-33 146.0 215 42.3
TPR.G9866 Trifolium pratense HOM05D004730 ORTHO05D005705 9.4e-33 146.0 351 29.3
Glyma.11G153900 Glycine max HOM05D004730 ORTHO05D005705 2.1e-32 144.8 351 29.1
Glyma.04G141000 Glycine max HOM05D004730 ORTHO05D005705 6.1e-32 143.3 368 29.6
Lj3g0019549 Lotus japonicus HOM05D004730 ORTHO05D005705 6.1e-32 143.3 334 29.9
Lalb_Chr21g0314351 Lupinus albus HOM05D004730 ORTHO05D005705 7.9e-32 142.9 373 29.2
MD01G1079900 Malus domestica HOM05D004730 ORTHO05D005705 1.8e-31 141.7 351 29.9
AagrBONN_evm.TU.Sc2ySwM_344.2008 Anthoceros agrestis HOM05D004730 ORTHO05D005705 3.0e-31 141.0 334 34.4
Duzib138G0598 Durio zibethinus HOM05D004730 ORTHO05D005705 3.0e-31 141.0 334 29.9
RcHm_v2.0_Chr1g0359341 Rosa chinensis HOM05D004730 ORTHO05D005705 3.0e-31 141.0 334 29.6
FvH4_7g16330 Fragaria vesca HOM05D004730 ORTHO05D005705 3.9e-31 140.6 334 29.6
FAN06G3857 Fragaria x ananassa HOM05D004730 ORTHO05D005705 3.9e-31 140.6 334 29.6
FAN06G4548 Fragaria x ananassa HOM05D004730 ORTHO05D005705 3.9e-31 140.6 334 29.6
Mapoly0091s0016 Marchantia polymorpha HOM05D004730 ORTHO05D005705 5.2e-31 140.2 336 36.6
Ciclev10019746m.g Citrus clementina HOM05D004730 ORTHO05D005705 6.7e-31 139.8 334 29.0
COL.COLO4_06293 Corchorus olitorius HOM05D004730 ORTHO05D005705 6.7e-31 139.8 373 28.7
Potri.002G170100 Populus trichocarpa HOM05D004730 ORTHO05D005705 6.7e-31 139.8 334 30.2
Nn1g01877 Nelumbo nucifera HOM05D004730 ORTHO05D005705 8.8e-31 139.4 334 29.6
Peaxi162Scf00403g00522 Petunia axillaris HOM05D004730 ORTHO05D005705 8.8e-31 139.4 334 29.9
SHI13286 Sapria himalayana HOM05D004730 ORTHO05D005705 8.8e-31 139.4 343 30.3
MSTRG.17337 Avicennia marina HOM05D004730 ORTHO05D005705 1.1e-30 139.0 334 29.6
Eucgr.D02369 Eucalyptus grandis HOM05D004730 ORTHO05D005705 1.1e-30 139.0 363 28.1
FAN10G2003 Fragaria x ananassa HOM05D004730 ORTHO05D005705 1.1e-30 139.0 334 29.3
Aqoxy2G00449 Aquilegia oxysepala HOM05D004730 ORTHO05D005705 1.5e-30 138.7 334 30.2
DCAR_005384 Daucus carota HOM05D004730 ORTHO05D005705 1.5e-30 138.7 390 27.7
MD07G1148700 Malus domestica HOM05D004730 ORTHO05D005705 1.5e-30 138.7 373 29.2
PGSC0003DMG400017986 Solanum tuberosum HOM05D004730 ORTHO05D005705 1.5e-30 138.7 350 29.4
Atru.chr5.659 Acer truncatum HOM05D004730 ORTHO05D005705 2.0e-30 138.3 334 29.0
ATR0213G028 Amborella trichopoda HOM05D004730 ORTHO05D005705 2.0e-30 138.3 366 30.1
Solyc05g050390.4 Solanum lycopersicum HOM05D004730 ORTHO05D005705 2.0e-30 138.3 350 29.4
Sopen05g028800 Solanum pennellii HOM05D004730 ORTHO05D005705 2.0e-30 138.3 350 29.4
THA.LOC104817359 Tarenaya hassleriana HOM05D004730 ORTHO05D005705 2.0e-30 138.3 357 28.6
Thecc.01G343400 Theobroma cacao HOM05D004730 ORTHO05D005705 2.0e-30 138.3 373 28.4
CAN.G239.1 Capsicum annuum HOM05D004730 ORTHO05D005705 2.6e-30 137.9 334 29.9
VMungo1080G1812 Vigna mungo HOM05D004730 ORTHO05D005705 2.6e-30 137.9 373 27.9
AL5G44220 Arabidopsis lyrata HOM05D004730 ORTHO05D005705 3.3e-30 137.5 357 28.3
FAN03G1043 Fragaria x ananassa HOM05D004730 ORTHO05D005705 3.3e-30 137.5 334 29.3
PSO210G5634 Papaver somniferum HOM05D004730 ORTHO05D005705 3.3e-30 137.5 348 30.2
GSVIVG01027092001 Vitis vinifera HOM05D004730 ORTHO05D005705 3.3e-30 137.5 334 29.6
arahy.Tifrunner.gnm1.ann1.DU0G1C Arachis hypogaea HOM05D004730 ORTHO05D005705 5.7e-30 136.7 364 27.5
SalBow3G2618 Salvia bowleyana HOM05D004730 ORTHO05D005705 5.7e-30 136.7 334 28.7
SGA_v2.0_scaffold5G03013 Striga asiatica HOM05D004730 ORTHO05D005705 5.7e-30 136.7 334 29.3
Prupe.2G187200 Prunus persica HOM05D004730 ORTHO05D005705 7.4e-30 136.3 334 29.3
Cfa003807 Carpinus fangiana HOM05D004730 ORTHO05D005705 9.7e-30 136.0 334 29.3
Gorai.004G152100 Gossypium raimondii HOM05D004730 ORTHO05D005705 9.7e-30 136.0 373 28.4
PSO339G2575 Papaver somniferum HOM05D004730 ORTHO05D005705 9.7e-30 136.0 334 29.0
Gohir.D08G146500 Gossypium hirsutum HOM05D004730 ORTHO05D005705 1.3e-29 135.6 373 28.4
AUR62023469 Chenopodium quinoa HOM05D004730 ORTHO05D005705 1.7e-29 135.2 334 29.3
Migut.B01859 Erythranthe guttata HOM05D004730 ORTHO05D005705 1.7e-29 135.2 334 29.0
MBI06_g08459_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 1.7e-29 135.2 334 29.0
Thhalv10005894m.g Eutrema salsugineum HOM05D004730 ORTHO05D005705 2.2e-29 134.8 375 27.7
Rhsim07G0004700 Rhododendron simsii HOM05D004730 ORTHO05D005705 2.2e-29 134.8 340 29.1
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 2.8e-29 134.4 382 28.3
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 2.8e-29 134.4 382 28.3
CSS0011474 Camellia sinensis var. sinensis HOM05D004730 ORTHO05D005705 3.7e-29 134.0 329 29.2
Nitab4.5_0000258g0150 Nicotiana tabacum HOM05D004730 ORTHO05D005705 3.7e-29 134.0 333 29.1
Sp5g01680 Schrenkiella parvula HOM05D004730 ORTHO05D005705 3.7e-29 134.0 365 27.9
C06p27700 Brassica napus HOM05D004730 ORTHO05D005705 4.8e-29 133.7 382 28.3
C06p27860 Brassica napus HOM05D004730 ORTHO05D005705 4.8e-29 133.7 382 28.3
BolC6t37941H Brassica oleracea HOM05D004730 ORTHO05D005705 4.8e-29 133.7 382 28.3
CANSAT56G1965 Cannabis sativa HOM05D004730 ORTHO05D005705 4.8e-29 133.7 336 29.8
Pp3c10_4130 Physcomitrium patens HOM05D004730 ORTHO05D005705 4.8e-29 133.7 341 29.9
PGR031G3931 Punica granatum HOM05D004730 ORTHO05D005705 4.8e-29 133.7 334 29.3
Nitab4.5_0004506g0070 Nicotiana tabacum HOM05D004730 ORTHO05D005705 8.2e-29 132.9 350 29.4
CARHR172020 Cardamine hirsuta HOM05D004730 ORTHO05D005705 1.1e-28 132.5 357 27.2
Gohir.A08G125600 Gossypium hirsutum HOM05D004730 ORTHO05D005705 1.1e-28 132.5 387 28.2
Oeu015369.3 Olea europaea HOM05D004730 ORTHO05D005705 1.4e-28 132.1 385 27.3
Os03g0644000 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 1.8e-28 131.7 334 29.0
CsaV3_6G008300 Cucumis sativus L. HOM05D004730 ORTHO05D005705 2.4e-28 131.3 369 28.2
EL10Ac1g00278 Beta vulgaris HOM05D004730 ORTHO05D005705 3.1e-28 131.0 373 27.6
Cc02_g39260 Coffea canephora HOM05D004730 ORTHO05D005705 4.1e-28 130.6 374 27.8
MELO3C022308.2 Cucumis melo HOM05D004730 ORTHO05D005705 4.1e-28 130.6 371 27.8
BcaC08g45152 Brassica carinata HOM05D004730 ORTHO05D005705 5.3e-28 130.2 391 28.4
ECA248G0182 Erigeron canadensis HOM05D004730 ORTHO05D005705 5.3e-28 130.2 334 28.7
Sc23g0002110 Simmondsia chinensis HOM05D004730 ORTHO05D005705 5.3e-28 130.2 351 27.6
Zm00001eb142950 Zea mays HOM05D004730 ORTHO05D005705 5.3e-28 130.2 334 29.9
HanXRQChr11g0353001 Helianthus annuus HOM05D004730 ORTHO05D005705 7.0e-28 129.8 359 27.9
Ah.05g179630 Amaranthus hybridus HOM05D004730 ORTHO05D005705 9.1e-28 129.4 334 28.1
CANSAT56G2405 Cannabis sativa HOM05D004730 ORTHO05D005705 9.1e-28 129.4 210 39.5
Carub.0003s3432 Capsella rubella HOM05D004730 ORTHO05D005705 9.1e-28 129.4 357 27.5
Carub.0005s2846 Capsella rubella HOM05D004730 ORTHO05D005705 9.1e-28 129.4 357 27.5
CiPaw.01G075800 Carya illinoinensis HOM05D004730 ORTHO05D005705 9.1e-28 129.4 393 28.5
SMO114G0122 Selaginella moellendorffii HOM05D004730 ORTHO05D005705 9.1e-28 129.4 362 29.0
Actinidia10133 Actinidia chinensis HOM05D004730 ORTHO05D005705 1.6e-27 128.6 334 28.7
Hund16708 Selenicereus undatus HOM05D004730 ORTHO05D005705 1.6e-27 128.6 373 27.6
Aa31LG1G27820 Aethionema arabicum HOM05D004730 ORTHO05D005705 2.0e-27 128.3 373 27.1
FAN10G3709 Fragaria x ananassa HOM05D004730 ORTHO05D005705 2.0e-27 128.3 334 32.0
vmacro13156 Vaccinium macrocarpon HOM05D004730 ORTHO05D005705 2.0e-27 128.3 393 26.2
CDE05G0988 Ceratophyllum demersum HOM05D004730 ORTHO05D005705 2.6e-27 127.9 338 30.8
AUR62004484 Chenopodium quinoa HOM05D004730 ORTHO05D005705 2.6e-27 127.9 333 28.2
unitig_62.g23797 Utricularia gibba HOM05D004730 ORTHO05D005705 2.6e-27 127.9 208 38.9
Os01g0681400 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 3.5e-27 127.5 334 28.4
Lj7C501G3 Lonicera japonica HOM05D004730 ORTHO05D005705 5.9e-27 126.7 342 28.7
Aa31LG10G15710 Aethionema arabicum HOM05D004730 ORTHO05D005705 1.0e-26 125.9 358 27.1
Lsat_1_v5_gn_3_139961 Lactuca sativa HOM05D004730 ORTHO05D005705 1.0e-26 125.9 370 27.0
Pp3c1_21510 Physcomitrium patens HOM05D004730 ORTHO05D005705 1.0e-26 125.9 349 27.5
Oeu019761.1 Olea europaea HOM05D004730 ORTHO05D005705 1.7e-26 125.2 208 37.5
Os03g0258500 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 1.7e-26 125.2 334 28.1
SEGI_06994 Sequoiadendron giganteum HOM05D004730 ORTHO05D005705 2.2e-26 124.8 333 27.6
Sed0022953 Sechium edule HOM05D004730 ORTHO05D005705 2.9e-26 124.4 369 27.1
Sc01g0002740 Simmondsia chinensis HOM05D004730 ORTHO05D005705 5.0e-26 123.6 336 28.9
TWI23G0180 Tripterygium wilfordii HOM05D004730 ORTHO05D005705 8.5e-26 122.9 379 34.0
Zm00001eb364100 Zea mays HOM05D004730 ORTHO05D005705 2.5e-25 121.3 340 27.9
arahy.Tifrunner.gnm1.ann1.EBD5YY Arachis hypogaea HOM05D004730 ORTHO05D005705 3.2e-25 120.9 401 25.4
TWI59G0293 Tripterygium wilfordii HOM05D004730 ORTHO05D005705 6.1e-24 116.7 363 34.4
Haze_15648 Corylus avellana HOM05D004730 ORTHO05D005705 8.0e-24 116.3 364 26.4
Cre01.g020264 Chlamydomonas reinhardtii HOM05D004730 ORTHO05D005705 1.8e-23 115.2 407 29.2
PRCOL_00007095 Prasinoderma coloniale HOM05D004730 ORTHO05D005705 1.8e-23 115.2 340 33.2
Sabra02G0142200 Salix brachista HOM05D004730 ORTHO05D005705 3.0e-23 114.4 370 25.7
Manes.01G246700 Manihot esculenta HOM05D004730 ORTHO05D005705 2.2e-21 108.2 298 27.9
TAR374G1455 Trochodendron aralioides HOM05D004730 ORTHO05D005705 6.3e-21 106.7 207 35.3
Psat5g217520 Pisum sativum HOM05D004730 ORTHO05D005705 7.0e-20 103.2 235 29.4
FAN01G1335 Fragaria x ananassa HOM05D004730 ORTHO05D005705 2.7e-19 101.3 272 27.9
AT3G61710 Arabidopsis thaliana HOM05D004730 ORTHO05D005705 4.5e-19 100.5 321 25.5
Duzib133G1016 Durio zibethinus HOM05D004730 ORTHO05D005705 3.8e-18 97.4 218 33.0
Cpa.g.sc96.6 Carica papaya HOM05D004730 ORTHO05D005705 6.5e-18 96.7 230 31.7
Dinv32581 Davidia involucrata HOM05D004730 ORTHO05D005705 3.6e-16 90.9 247 28.3
Dinv35110 Davidia involucrata HOM05D004730 ORTHO05D005705 1.8e-15 88.6 208 28.8
ClCG06G002220 Citrullus lanatus HOM05D004730 ORTHO05D005705 3.0e-15 87.8 243 27.6
TAR374G0734 Trochodendron aralioides HOM05D004730 ORTHO05D005705 4.0e-15 87.4 207 29.0
PGR031G3051 Punica granatum HOM05D004730 ORTHO05D005705 5.2e-15 87.0 334 24.0
BolC6t37951H Brassica oleracea HOM05D004730 ORTHO05D005705 6.8e-15 86.7 257 26.5
vmacro12679 Vaccinium macrocarpon HOM05D004730 ORTHO05D005705 2.0e-14 85.1 313 24.6
Rhsim01G0172100 Rhododendron simsii HOM05D004730 ORTHO05D005705 3.4e-14 84.3 341 22.6
HPP92_011453 Vanilla planifolia HOM05D004730 ORTHO05D005705 4.4e-14 84.0 349 22.6
CARHR263800 Cardamine hirsuta HOM05D004730 ORTHO05D005705 2.4e-12 78.2 206 31.1
MBI06_g41841_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 1.6e-08 65.5 179 29.1
Cpa.g.sc96.5 Carica papaya HOM05D004730 ORTHO05D005705 1.5e-06 58.9 85 35.3
Ca_26830_v3 Cicer arietinum L. HOM05D004730 ORTHO05D005705 2.6e-06 58.2 85 35.3
FAN01G0353 Fragaria x ananassa HOM05D004730 ORTHO05D005705 2.6e-06 58.2 85 35.3


User provided reference genes

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