Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.0e-186 654.1 337 100.0
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 3.2e-30 136.7 325 31.4
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 2.7e-29 133.7 325 28.9
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 3.6e-29 133.3 327 31.5
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 1.5e-27 127.9 222 34.7
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 2.6e-27 127.1 322 29.5
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 3.3e-27 126.7 322 28.3
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 9.7e-27 125.2 320 28.1
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.7e-26 124.4 221 33.5
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 2.2e-26 124.0 324 27.2
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.2e-26 124.0 303 29.4
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.8e-26 123.6 326 28.5
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 3.7e-26 123.2 324 27.8
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 3.7e-26 123.2 324 27.8
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 4.8e-26 122.9 307 29.6
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 4.8e-26 122.9 325 27.7
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 6.3e-26 122.5 221 32.1
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 8.2e-26 122.1 324 27.2
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 8.2e-26 122.1 276 29.7
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.1e-25 121.7 325 28.0
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 1.1e-25 121.7 221 32.1
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 1.1e-25 121.7 325 28.9
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 1.1e-25 121.7 325 28.9
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 1.4e-25 121.3 276 29.3
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 1.4e-25 121.3 275 29.8
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 1.4e-25 121.3 326 28.8
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.4e-25 121.3 329 29.8
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 1.4e-25 121.3 277 28.5
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 1.8e-25 120.9 325 28.0
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.8e-25 120.9 276 29.3
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 1.8e-25 120.9 324 27.2
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 1.8e-25 120.9 276 28.6
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 2.4e-25 120.6 223 33.6
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 2.4e-25 120.6 222 32.0
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 3.1e-25 120.2 303 29.4
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 7.0e-25 119.0 325 27.4
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 7.0e-25 119.0 307 29.0
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 7.0e-25 119.0 303 29.4
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 1.2e-24 118.2 308 28.9
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.2e-24 118.2 325 27.7
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 1.6e-24 117.9 222 32.4
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.6e-24 117.9 281 29.5
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 1.6e-24 117.9 222 32.4
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 2.0e-24 117.5 302 28.1
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 2.0e-24 117.5 231 31.2
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 4.5e-24 116.3 222 33.8
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 5.9e-24 115.9 324 26.5
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 5.9e-24 115.9 324 27.2
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 5.9e-24 115.9 319 27.0
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 7.7e-24 115.5 326 27.6
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 7.7e-24 115.5 324 27.2
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.0e-23 115.2 221 32.1
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.0e-23 115.2 325 26.5
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.3e-23 114.8 325 27.4
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 1.3e-23 114.8 221 30.8
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 2.2e-23 114.0 222 32.4
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 2.2e-23 114.0 222 32.4
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 2.9e-23 113.6 324 27.5
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 3.8e-23 113.2 326 27.3
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 5.0e-23 112.8 326 27.0
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 8.5e-23 112.1 280 28.2
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 8.5e-23 112.1 301 29.2
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 8.5e-23 112.1 335 26.6
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 1.1e-22 111.7 275 27.3
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 1.1e-22 111.7 325 26.8
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.5e-22 111.3 326 26.1
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.5e-22 111.3 292 29.1
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.5e-22 111.3 315 27.9
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 1.9e-22 110.9 322 26.1
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.9e-22 110.9 303 28.7
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 2.5e-22 110.5 324 25.6
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 5.5e-22 109.4 323 27.2
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 7.2e-22 109.0 222 31.5
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 7.2e-22 109.0 326 26.4
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 7.2e-22 109.0 334 26.6
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.2e-21 108.2 232 29.7
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 1.6e-21 107.8 324 25.9
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 2.1e-21 107.5 325 25.5
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 2.7e-21 107.1 211 29.9
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 4.7e-21 106.3 232 30.2
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 4.7e-21 106.3 211 31.8
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 8.0e-21 105.5 274 29.2
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.4e-20 104.8 330 29.4
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 2.3e-20 104.0 187 33.2
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.5e-19 101.3 367 26.2
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 2.0e-19 100.9 250 28.0
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 9.7e-19 98.6 308 27.9
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 9.7e-19 98.6 210 30.0
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.3e-18 98.2 275 26.9
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 2.8e-18 97.1 303 27.1
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.1e-17 95.1 314 27.1
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.4e-17 94.7 316 25.6
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.8e-17 94.4 168 32.7
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 2.4e-17 94.0 324 25.3
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 4.1e-17 93.2 235 28.9
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 5.3e-17 92.8 325 23.7
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 7.0e-17 92.4 284 26.8
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 9.1e-17 92.0 154 34.4
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.0e-16 90.9 324 24.4
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 3.5e-16 90.1 134 36.6
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 3.5e-16 90.1 255 27.8
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 4.5e-16 89.7 300 24.0
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 5.9e-16 89.4 304 23.7
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.3e-15 88.2 329 25.8
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 5.0e-15 86.3 223 27.4
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.5e-14 84.7 118 39.0
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 2.5e-14 84.0 273 24.2
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 5.5e-14 82.8 188 27.7
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.8e-12 77.8 193 26.9
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 3.7e-10 70.1 229 24.0
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 6.3e-10 69.3 175 25.1
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 8.3e-10 68.9 229 27.1
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 8.3e-10 68.9 124 33.1
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 2.4e-09 67.4 116 31.9
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 9.1e-09 65.5 243 25.9
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 7.7e-08 62.4 185 25.4
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 7.7e-08 62.4 71 42.3
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 3.8e-07 60.1 71 40.8


User provided reference genes

Program Settings