Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022283 Carpinus fangiana HOM05D004216 ORTHO05D004926 0.0e+00 2781.9 1456 100.0
CARHR067070 Cardamine hirsuta HOM05D004216 ORTHO05D004926 1.1e-74 286.6 1027 26.4
AL2G33790 Arabidopsis lyrata HOM05D004216 ORTHO05D004926 2.4e-74 285.4 1024 26.4
Ciclev10018514m.g Citrus clementina HOM05D004216 ORTHO05D004926 1.2e-73 283.1 1043 26.6
Hund02527 Selenicereus undatus HOM05D004216 ORTHO05D004926 1.2e-73 283.1 1037 25.2
AT1G73960 Arabidopsis thaliana HOM05D004216 ORTHO05D004926 1.6e-73 282.7 990 26.5
Carub.0002s2073 Capsella rubella HOM05D004216 ORTHO05D004926 1.6e-73 282.7 993 26.0
C06p48070 Brassica napus HOM05D004216 ORTHO05D004926 4.6e-73 281.2 994 25.8
BolC6t39842H Brassica oleracea HOM05D004216 ORTHO05D004926 4.6e-73 281.2 872 26.5
A07p39800 Brassica napus HOM05D004216 ORTHO05D004926 1.5e-71 276.2 872 26.3
Thhalv10018013m.g Eutrema salsugineum HOM05D004216 ORTHO05D004926 1.5e-71 276.2 1027 25.9
SEGI_21625 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 1.9e-71 275.8 902 25.5
FAN18G1390 Fragaria x ananassa HOM05D004216 ORTHO05D004926 2.5e-71 275.4 854 26.9
Aqoxy3G03901 Aquilegia oxysepala HOM05D004216 ORTHO05D004926 9.5e-71 273.5 870 26.8
PGR044G2306 Punica granatum HOM05D004216 ORTHO05D004926 9.5e-71 273.5 890 26.4
FvH4_5g12730 Fragaria vesca HOM05D004216 ORTHO05D004926 1.2e-70 273.1 1047 25.3
QL10p022943 Quercus lobata HOM05D004216 ORTHO05D004926 1.2e-70 273.1 1041 26.0
Sp5g29160 Schrenkiella parvula HOM05D004216 ORTHO05D004926 1.2e-70 273.1 827 27.3
FAN13G0239 Fragaria x ananassa HOM05D004216 ORTHO05D004926 1.6e-70 272.7 847 27.0
FAN04G0815 Fragaria x ananassa HOM05D004216 ORTHO05D004926 2.1e-70 272.3 1040 25.7
FAN08G0408 Fragaria x ananassa HOM05D004216 ORTHO05D004926 2.8e-70 271.9 850 26.9
Cc04_g07550 Coffea canephora HOM05D004216 ORTHO05D004926 4.7e-70 271.2 873 26.5
Nitab4.5_0001599g0210 Nicotiana tabacum HOM05D004216 ORTHO05D004926 4.7e-70 271.2 883 26.5
RcHm_v2.0_Chr7g0184581 Rosa chinensis HOM05D004216 ORTHO05D004926 4.7e-70 271.2 1045 24.9
Aa31LG4G4250 Aethionema arabicum HOM05D004216 ORTHO05D004926 8.1e-70 270.4 1045 25.6
AUR62036947 Chenopodium quinoa HOM05D004216 ORTHO05D004926 1.4e-69 269.6 1032 24.9
Thecc.03G027900 Theobroma cacao HOM05D004216 ORTHO05D004926 4.0e-69 268.1 1052 25.8
CANSAT80G0956 Cannabis sativa HOM05D004216 ORTHO05D004926 5.2e-69 267.7 1047 25.9
Lsat_1_v5_gn_5_25060 Lactuca sativa HOM05D004216 ORTHO05D004926 6.8e-69 267.3 1035 24.6
Sopen03g038630 Solanum pennellii HOM05D004216 ORTHO05D004926 6.8e-69 267.3 884 26.4
TPR.G26791 Trifolium pratense HOM05D004216 ORTHO05D004926 6.8e-69 267.3 1050 25.6
arahy.Tifrunner.gnm1.ann1.CB5LZE Arachis hypogaea HOM05D004216 ORTHO05D004926 1.2e-68 266.5 1055 26.1
Nitab4.5_0000410g0130 Nicotiana tabacum HOM05D004216 ORTHO05D004926 1.2e-68 266.5 883 26.2
Zm00001eb312360 Zea mays HOM05D004216 ORTHO05D004926 1.2e-68 266.5 822 26.5
BraA07t31527Z Brassica rapa HOM05D004216 ORTHO05D004926 1.5e-68 266.2 886 25.8
arahy.Tifrunner.gnm1.ann1.868KN4 Arachis hypogaea HOM05D004216 ORTHO05D004926 2.0e-68 265.8 1055 26.0
Lj4g0001448 Lotus japonicus HOM05D004216 ORTHO05D004926 2.6e-68 265.4 931 26.2
Cfa019828 Carpinus fangiana HOM05D004216 ORTHO05D004926 3.4e-68 265.0 1036 25.1
Solyc03g119780.4 Solanum lycopersicum HOM05D004216 ORTHO05D004926 3.4e-68 265.0 884 26.2
CiPaw.15G126300 Carya illinoinensis HOM05D004216 ORTHO05D004926 4.4e-68 264.6 1041 25.4
Mapoly0014s0115 Marchantia polymorpha HOM05D004216 ORTHO05D004926 4.4e-68 264.6 1033 25.1
AUR62032188 Chenopodium quinoa HOM05D004216 ORTHO05D004926 5.8e-68 264.2 1069 24.7
Nn4g23713 Nelumbo nucifera HOM05D004216 ORTHO05D004926 5.8e-68 264.2 899 25.8
Ca_02536_v3 Cicer arietinum L. HOM05D004216 ORTHO05D004926 7.6e-68 263.8 1022 25.1
Eucgr.K02653 Eucalyptus grandis HOM05D004216 ORTHO05D004926 7.6e-68 263.8 891 25.9
CAN.G438.113 Capsicum annuum HOM05D004216 ORTHO05D004926 2.2e-67 262.3 881 25.7
Lalb_Chr12g0197541 Lupinus albus HOM05D004216 ORTHO05D004926 2.2e-67 262.3 1050 25.4
PSO478G4514 Papaver somniferum HOM05D004216 ORTHO05D004926 2.2e-67 262.3 869 27.3
Migut.J01004 Erythranthe guttata HOM05D004216 ORTHO05D004926 3.8e-67 261.5 905 25.6
Gorai.001G045800 Gossypium raimondii HOM05D004216 ORTHO05D004926 4.9e-67 261.2 1050 25.3
PSO017G0533 Papaver somniferum HOM05D004216 ORTHO05D004926 6.4e-67 260.8 819 27.8
CSS0006085 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 1.1e-66 260.0 892 25.9
CSS0012337 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 1.1e-66 260.0 892 25.9
THA.LOC104812129 Tarenaya hassleriana HOM05D004216 ORTHO05D004926 1.4e-66 259.6 853 26.1
FAN18G2177 Fragaria x ananassa HOM05D004216 ORTHO05D004926 1.9e-66 259.2 846 26.4
Psat4g043600 Pisum sativum HOM05D004216 ORTHO05D004926 2.4e-66 258.8 853 26.5
TWI81G0292 Tripterygium wilfordii HOM05D004216 ORTHO05D004926 2.4e-66 258.8 1040 25.4
CsaV3_1G006480 Cucumis sativus L. HOM05D004216 ORTHO05D004926 3.2e-66 258.5 894 25.1
HanXRQChr05g0153841 Helianthus annuus HOM05D004216 ORTHO05D004926 4.1e-66 258.1 1064 24.6
ATR0564G329 Amborella trichopoda HOM05D004216 ORTHO05D004926 5.4e-66 257.7 989 25.2
MELO3C002074.2 Cucumis melo HOM05D004216 ORTHO05D004926 5.4e-66 257.7 894 25.1
Hma1.2p1_0595F.1_g186000 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 5.4e-66 257.7 1052 25.1
SGA_v2.0_scaffold13G06699 Striga asiatica HOM05D004216 ORTHO05D004926 5.4e-66 257.7 988 24.5
MSTRG.5865 Avicennia marina HOM05D004216 ORTHO05D004926 7.1e-66 257.3 917 25.7
SalBow3G4568 Salvia bowleyana HOM05D004216 ORTHO05D004926 7.1e-66 257.3 925 25.5
Glyma.05G013400 Glycine max HOM05D004216 ORTHO05D004926 9.2e-66 256.9 994 25.4
Dinv38590 Davidia involucrata HOM05D004216 ORTHO05D004926 2.1e-65 255.8 974 24.5
Prupe.5G217000 Prunus persica HOM05D004216 ORTHO05D004926 6.0e-65 254.2 722 27.7
Glyma.17G121600 Glycine max HOM05D004216 ORTHO05D004926 1.0e-64 253.4 993 26.2
Atru.chr9.749 Acer truncatum HOM05D004216 ORTHO05D004926 1.3e-64 253.1 1046 25.1
VMungo1215G1362 Vigna mungo HOM05D004216 ORTHO05D004926 1.3e-64 253.1 988 25.7
MD06G1211000 Malus domestica HOM05D004216 ORTHO05D004926 2.3e-64 252.3 750 27.7
Sc10g0009590 Simmondsia chinensis HOM05D004216 ORTHO05D004926 3.9e-64 251.5 755 26.6
Potri.015G050800 Populus trichocarpa HOM05D004216 ORTHO05D004926 1.5e-63 249.6 757 26.4
Sed0006394 Sechium edule HOM05D004216 ORTHO05D004926 1.5e-63 249.6 926 24.4
Duzib205G0916 Durio zibethinus HOM05D004216 ORTHO05D004926 3.3e-63 248.4 784 27.2
ECA246G5151 Erigeron canadensis HOM05D004216 ORTHO05D004926 3.3e-63 248.4 887 24.9
CDE05G2534 Ceratophyllum demersum HOM05D004216 ORTHO05D004926 4.3e-63 248.1 829 25.2
Manes.05G119100 Manihot esculenta HOM05D004216 ORTHO05D004926 5.6e-63 247.7 820 26.7
Pp3c21_15920 Physcomitrium patens HOM05D004216 ORTHO05D004926 5.6e-63 247.7 997 25.5
Oeu004769.3 Olea europaea HOM05D004216 ORTHO05D004926 6.2e-62 244.2 1081 24.1
Phvul.003G177400 Phaseolus vulgaris HOM05D004216 ORTHO05D004926 6.2e-62 244.2 925 26.1
HPP92_023478 Vanilla planifolia HOM05D004216 ORTHO05D004926 5.2e-61 241.1 985 25.2
EL10Ac5g11246 Beta vulgaris HOM05D004216 ORTHO05D004926 1.2e-60 240.0 985 24.9
Actinidia31032 Actinidia chinensis HOM05D004216 ORTHO05D004926 2.0e-60 239.2 889 25.5
ClCG04G011280 Citrullus lanatus HOM05D004216 ORTHO05D004926 1.7e-59 236.1 882 25.6
Rhsim08G0138000 Rhododendron simsii HOM05D004216 ORTHO05D004926 1.9e-58 232.6 745 26.8
GSVIVG01008230001 Vitis vinifera HOM05D004216 ORTHO05D004926 2.4e-58 232.3 907 25.0
Peaxi162Scf00015g00072 Petunia axillaris HOM05D004216 ORTHO05D004926 5.4e-58 231.1 882 24.5
DCAR_001432 Daucus carota HOM05D004216 ORTHO05D004926 1.2e-57 229.9 864 23.3
Pp3c18_6100 Physcomitrium patens HOM05D004216 ORTHO05D004926 1.2e-57 229.9 1001 23.7
Gohir.A07G038732 Gossypium hirsutum HOM05D004216 ORTHO05D004926 6.2e-54 217.6 868 25.3
TAR371G0728 Trochodendron aralioides HOM05D004216 ORTHO05D004926 6.2e-54 217.6 683 28.4
Hma1.2p1_0595F.1_g186010 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 1.4e-53 216.5 870 25.2
Ah.11g047140 Amaranthus hybridus HOM05D004216 ORTHO05D004926 1.5e-52 213.0 723 26.0
SMO367G1244 Selaginella moellendorffii HOM05D004216 ORTHO05D004926 2.6e-52 212.2 728 25.7
Gohir.A07G038666 Gossypium hirsutum HOM05D004216 ORTHO05D004926 1.3e-51 209.9 806 25.6
AagrBONN_evm.TU.Sc2ySwM_117.3880 Anthoceros agrestis HOM05D004216 ORTHO05D004926 2.2e-51 209.1 913 23.7
vmacro17679 Vaccinium macrocarpon HOM05D004216 ORTHO05D004926 7.9e-49 200.7 516 30.0
Sabra15G0075800 Salix brachista HOM05D004216 ORTHO05D004926 4.2e-42 178.3 773 25.0
Lj9A432G69 Lonicera japonica HOM05D004216 ORTHO05D004926 6.2e-38 164.5 535 26.2
unitig_578.g15823 Utricularia gibba HOM05D004216 ORTHO05D004926 1.0e-24 120.6 498 24.7
Cpa.g.sc1020.1 Carica papaya HOM05D004216 ORTHO05D004926 3.0e-24 119.0 323 26.9
Gohir.D07G042740 Gossypium hirsutum HOM05D004216 ORTHO05D004926 3.0e-24 119.0 305 29.2
SEGI_35421 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 4.3e-23 115.2 376 25.0
Cre13.g583500 Chlamydomonas reinhardtii HOM05D004216 ORTHO05D004926 9.7e-23 114.0 584 22.3
COL.COLO4_22716 Corchorus olitorius HOM05D004216 ORTHO05D004926 1.1e-21 110.5 461 25.2
COL.COLO4_22715 Corchorus olitorius HOM05D004216 ORTHO05D004926 2.0e-20 106.3 317 28.1
PRCOL_00003918 Prasinoderma coloniale HOM05D004216 ORTHO05D004926 1.0e-19 104.0 572 22.4
Gohir.D07G042820 Gossypium hirsutum HOM05D004216 ORTHO05D004926 2.7e-17 95.9 246 27.6
Medtr1014s0010 Medicago truncatula HOM05D004216 ORTHO05D004926 9.1e-13 80.9 223 26.5
HPP92_023454 Vanilla planifolia HOM05D004216 ORTHO05D004926 1.3e-11 77.0 192 28.6
Lj9P432G41 Lonicera japonica HOM05D004216 ORTHO05D004926 1.6e-09 70.1 264 24.6
Lj9A432T73 Lonicera japonica HOM05D004216 ORTHO05D004926 4.4e-07 62.0 79 39.2
Lj6g0001849 Lotus japonicus HOM05D004216 ORTHO05D004926 1.7e-06 60.1 49 51.0


User provided reference genes

Program Settings