Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa022130 Carpinus fangiana HOM05D005402 ORTHO05D007036 5.9e-234 813.9 438 100.0
Pp3c5_4450 Physcomitrium patens HOM05D005402 ORTHO05D007036 6.7e-28 129.4 234 34.2
CBR_g31384 Chara braunii HOM05D005402 ORTHO05D007036 1.2e-24 118.6 199 34.7
Mapoly0165s0012 Marchantia polymorpha HOM05D005402 ORTHO05D007036 3.4e-24 117.1 288 31.2
Cre10.g442000 Chlamydomonas reinhardtii HOM05D005402 ORTHO05D007036 3.8e-23 113.6 212 30.7
AagrBONN_evm.TU.Sc2ySwM_228.882 Anthoceros agrestis HOM05D005402 ORTHO05D007036 1.4e-22 111.7 209 34.4
BcaB03g12559 Brassica carinata HOM05D005402 ORTHO05D007036 1.2e-21 108.6 294 31.6
PGR004G0080 Punica granatum HOM05D005402 ORTHO05D007036 2.1e-21 107.8 205 33.2
Nn1g07183 Nelumbo nucifera HOM05D005402 ORTHO05D007036 2.7e-21 107.5 315 29.8
TAR629G0778 Trochodendron aralioides HOM05D005402 ORTHO05D007036 2.7e-21 107.5 315 30.8
DCAR_028193 Daucus carota HOM05D000001 ORTHO05D007036 4.6e-21 106.7 272 31.6
Migut.M01334 Erythranthe guttata HOM05D005402 ORTHO05D007036 4.6e-21 106.7 227 33.0
Lj4g0015196 Lotus japonicus HOM05D005402 ORTHO05D007036 4.6e-21 106.7 254 31.9
SalBow8G4792 Salvia bowleyana HOM05D005402 ORTHO05D007036 4.6e-21 106.7 209 34.9
TWI63G0339 Tripterygium wilfordii HOM05D005402 ORTHO05D007036 1.4e-20 105.1 260 31.2
BcaC07g38316 Brassica carinata HOM05D005402 ORTHO05D007036 1.8e-20 104.8 257 31.5
C08p10670 Brassica napus HOM05D005402 ORTHO05D007036 1.8e-20 104.8 257 31.5
BolC8t48740H Brassica oleracea HOM05D005402 ORTHO05D007036 1.8e-20 104.8 257 31.5
Nitab4.5_0004712g0050 Nicotiana tabacum HOM05D005402 ORTHO05D007036 1.8e-20 104.8 206 32.5
HanXRQChr15g0470411 Helianthus annuus HOM05D005402 ORTHO05D007036 2.3e-20 104.4 213 34.3
SMO203G0067 Selaginella moellendorffii HOM05D005402 ORTHO05D007036 2.3e-20 104.4 227 30.4
ATR0743G102 Amborella trichopoda HOM05D005402 ORTHO05D007036 3.0e-20 104.0 246 32.5
Nitab4.5_0000005g0240 Nicotiana tabacum HOM05D005402 ORTHO05D007036 3.9e-20 103.6 206 32.0
Cc09_g01510 Coffea canephora HOM05D005402 ORTHO05D007036 5.1e-20 103.2 224 32.1
Solyc02g032920.3 Solanum lycopersicum HOM05D005402 ORTHO05D007036 5.1e-20 103.2 206 32.0
Sopen02g011290 Solanum pennellii HOM05D005402 ORTHO05D007036 5.1e-20 103.2 206 32.0
Ciclev10014465m.g Citrus clementina HOM05D005402 ORTHO05D007036 6.7e-20 102.8 258 30.6
Peaxi162Scf00307g01422 Petunia axillaris HOM05D005402 ORTHO05D007036 6.7e-20 102.8 206 32.0
A08p20200 Brassica napus HOM05D005402 ORTHO05D007036 8.8e-20 102.4 214 33.2
BraA08t33979Z Brassica rapa HOM05D005402 ORTHO05D007036 8.8e-20 102.4 214 33.2
COL.COLO4_31795 Corchorus olitorius HOM05D005402 ORTHO05D007036 8.8e-20 102.4 299 29.1
PGSC0003DMG400022060 Solanum tuberosum HOM05D005402 ORTHO05D007036 8.8e-20 102.4 245 29.4
Carub.0007s1256 Capsella rubella HOM05D005402 ORTHO05D007036 1.1e-19 102.1 208 32.7
CAN.G128.67 Capsicum annuum HOM05D005402 ORTHO05D007036 1.5e-19 101.7 209 31.6
Thecc.06G223300 Theobroma cacao HOM05D005402 ORTHO05D007036 1.5e-19 101.7 274 29.6
vmacro15795 Vaccinium macrocarpon HOM05D005402 ORTHO05D007036 1.5e-19 101.7 238 32.4
GSVIVG01012705001 Vitis vinifera HOM05D005402 ORTHO05D007036 2.0e-19 101.3 228 31.1
CsaV3_6G048920 Cucumis sativus L. HOM05D005402 ORTHO05D007036 2.5e-19 100.9 211 34.1
Dinv13911 Davidia involucrata HOM05D005402 ORTHO05D007036 2.5e-19 100.9 238 32.4
Dinv20063 Davidia involucrata HOM05D005402 ORTHO05D007036 2.5e-19 100.9 209 33.5
Hund23456 Selenicereus undatus HOM05D005402 ORTHO05D007036 2.5e-19 100.9 238 32.8
Sc05g0009280 Simmondsia chinensis HOM05D005402 ORTHO05D007036 2.5e-19 100.9 265 30.6
Actinidia11859 Actinidia chinensis HOM05D005402 ORTHO05D007036 3.3e-19 100.5 286 29.7
MSTRG.7199 Avicennia marina HOM05D005402 ORTHO05D007036 3.3e-19 100.5 295 28.8
EL10Ac3g06734 Beta vulgaris HOM05D005402 ORTHO05D007036 3.3e-19 100.5 238 33.6
MELO3C007401.2 Cucumis melo HOM05D005402 ORTHO05D007036 3.3e-19 100.5 211 34.1
ClCG01G021860 Citrullus lanatus HOM05D005402 ORTHO05D007036 4.3e-19 100.1 211 34.1
ECA236G3723 Erigeron canadensis HOM05D005402 ORTHO05D000490 4.3e-19 100.1 205 31.7
Manes.16G005300 Manihot esculenta HOM05D005402 ORTHO05D007036 4.3e-19 100.1 212 32.5
Oeu040335.1 Olea europaea HOM05D005402 ORTHO05D007036 4.3e-19 100.1 235 31.9
Sp7g26160 Schrenkiella parvula HOM05D005402 ORTHO05D007036 4.3e-19 100.1 286 30.8
BcaB03g12558 Brassica carinata HOM05D005402 ORTHO05D007036 5.7e-19 99.8 213 32.4
Lsat_1_v5_gn_7_16460 Lactuca sativa HOM05D005402 ORTHO05D007036 5.7e-19 99.8 250 31.2
CSS0005702 Camellia sinensis var. sinensis HOM05D005402 ORTHO05D007036 7.4e-19 99.4 237 32.1
Duzib235G0987 Durio zibethinus HOM05D005402 ORTHO05D007036 7.4e-19 99.4 299 30.1
PSO675G3880 Papaver somniferum HOM05D005402 ORTHO05D007036 7.4e-19 99.4 261 29.9
RcHm_v2.0_Chr7g0223851 Rosa chinensis HOM05D005402 ORTHO05D007036 7.4e-19 99.4 305 29.2
CDE05G1008 Ceratophyllum demersum HOM05D005402 ORTHO05D007036 1.3e-18 98.6 210 31.4
Psat4g006080 Pisum sativum HOM05D005402 ORTHO05D007036 1.3e-18 98.6 266 31.2
Glyma.07G261900 Glycine max HOM05D005402 ORTHO05D007036 1.7e-18 98.2 209 31.1
Gorai.009G179800 Gossypium raimondii HOM05D005402 ORTHO05D007036 1.7e-18 98.2 267 30.0
Lj2C266G9 Lonicera japonica HOM05D005402 ORTHO05D007036 1.7e-18 98.2 257 31.5
AT4G28200 Arabidopsis thaliana HOM05D005402 ORTHO05D007036 2.2e-18 97.8 208 31.2
FvH4_5g29980 Fragaria vesca HOM05D005402 ORTHO05D007036 2.2e-18 97.8 318 28.9
FAN13G2175 Fragaria x ananassa HOM05D005402 ORTHO05D007036 2.2e-18 97.8 318 28.9
Hma1.2p1_0412F.1_g147300 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 2.2e-18 97.8 265 30.9
Ca_21074_v3 Cicer arietinum L. HOM05D005402 ORTHO05D007036 2.8e-18 97.4 265 30.6
Eucgr.D01347 Eucalyptus grandis HOM05D005402 ORTHO05D007036 2.8e-18 97.4 264 29.2
FAN08G3587 Fragaria x ananassa HOM05D005402 ORTHO05D007036 2.8e-18 97.4 318 28.9
Sed0000438 Sechium edule HOM05D005402 ORTHO05D007036 2.8e-18 97.4 249 31.3
THA.LOC104806309 Tarenaya hassleriana HOM05D005402 ORTHO05D007036 2.8e-18 97.4 249 30.5
Glyma.17G012200 Glycine max HOM05D005402 ORTHO05D007036 3.7e-18 97.1 209 31.6
Potri.007G040000 Populus trichocarpa HOM05D005402 ORTHO05D007036 3.7e-18 97.1 183 34.4
CARHR235910 Cardamine hirsuta HOM05D005402 ORTHO05D007036 4.8e-18 96.7 208 31.2
MCO01G148 Micromonas commoda HOM05D005402 ORTHO05D007036 4.8e-18 96.7 203 31.5
CiPaw.09G093500 Carya illinoinensis HOM05D005402 ORTHO05D007036 6.3e-18 96.3 209 32.5
Thhalv10024642m.g Eutrema salsugineum HOM05D005402 ORTHO05D007036 6.3e-18 96.3 213 32.4
FAN04G1555 Fragaria x ananassa HOM05D005402 ORTHO05D007036 6.3e-18 96.3 318 28.6
Gohir.A05G171400 Gossypium hirsutum HOM05D005402 ORTHO05D007036 6.3e-18 96.3 255 29.8
Aa31LG6G3970 Aethionema arabicum HOM05D005402 ORTHO05D007036 8.2e-18 95.9 247 30.8
Sabra07G0036200 Salix brachista HOM05D005402 ORTHO05D007036 8.2e-18 95.9 211 31.3
Aqoxy1G03121 Aquilegia oxysepala HOM05D005402 ORTHO05D007036 1.1e-17 95.5 240 30.0
PSO541G1465 Papaver somniferum HOM05D005402 ORTHO05D007036 1.1e-17 95.5 261 28.7
Phvul.003G080200 Phaseolus vulgaris HOM05D005402 ORTHO05D007036 1.1e-17 95.5 254 29.9
CANSAT56G4097 Cannabis sativa HOM05D005402 ORTHO05D007036 1.4e-17 95.1 324 27.8
FAN18G2172 Fragaria x ananassa HOM05D005402 ORTHO05D007036 1.4e-17 95.1 318 28.6
AL7G24400 Arabidopsis lyrata HOM05D005402 ORTHO05D007036 1.8e-17 94.7 253 30.0
arahy.Tifrunner.gnm1.ann1.I0ZCH2 Arachis hypogaea HOM05D005402 ORTHO05D007036 1.8e-17 94.7 240 30.0
MD15G1066800 Malus domestica HOM05D005402 ORTHO05D007036 1.8e-17 94.7 297 25.9
Prupe.4G224400 Prunus persica HOM05D005402 ORTHO05D007036 1.8e-17 94.7 319 27.6
SEGI_35740 Sequoiadendron giganteum HOM05D005402 ORTHO05D007036 1.8e-17 94.7 253 30.8
MBI02_g15380_MAGBIO Magnolia biondii HOM05D005402 ORTHO05D007036 3.1e-17 94.0 223 29.6
Os02g0103900 Oryza sativa ssp. japonica HOM05D005402 ORTHO05D007036 4.1e-17 93.6 232 29.3
TPR.G36999 Trifolium pratense HOM05D005402 ORTHO05D007036 4.1e-17 93.6 240 30.0
Cfa000204 Carpinus fangiana HOM05D005402 ORTHO05D007036 5.3e-17 93.2 209 31.6
Gohir.D05G174500 Gossypium hirsutum HOM05D005402 ORTHO05D007036 6.9e-17 92.8 275 30.2
QL05p072729 Quercus lobata HOM05D005402 ORTHO05D007036 9.1e-17 92.4 314 28.0
arahy.Tifrunner.gnm1.ann1.T40CTJ Arachis hypogaea HOM05D005402 ORTHO05D007036 1.2e-16 92.0 316 26.3
Medtr4g132340 Medicago truncatula HOM05D005402 ORTHO05D007036 1.2e-16 92.0 240 30.0
Lalb_Chr07g0177141 Lupinus albus HOM05D005402 ORTHO05D007036 1.5e-16 91.7 292 28.1
VMungo1215G1509 Vigna mungo HOM05D005402 ORTHO05D007036 1.5e-16 91.7 303 28.1
Atru.chr10.2252 Acer truncatum HOM05D005402 ORTHO05D007036 4.5e-16 90.1 277 28.5
Haze_06819 Corylus avellana HOM05D005402 ORTHO05D007036 7.7e-16 89.4 258 30.2
HPP92_012414 Vanilla planifolia HOM05D005402 ORTHO05D007036 1.0e-15 89.0 220 27.3
MD08G1079900 Malus domestica HOM05D005402 ORTHO05D007036 3.2e-14 84.0 294 24.8
Peaxi162Scf00394g00020 Petunia axillaris HOM05D005402 ORTHO05D007036 2.7e-13 80.9 206 30.6
unitig_748.g7549 Utricularia gibba HOM05D005402 ORTHO05D007036 2.7e-13 80.9 208 31.2
Ah.10g032740 Amaranthus hybridus HOM05D005402 ORTHO05D007036 3.6e-13 80.5 209 28.7
Hma1.2p1_0412F.1_g147310 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 2.0e-11 74.7 177 32.8


User provided reference genes

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